RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CCDC171Q6TFL3 1326 aa25.34■■□□□ 1.65
TSPAN4-206ENST00000397408 FOXN1O15353 648 aa25.33■■□□□ 1.65
TSPAN4-206ENST00000397408 FOXP2O15409 715 aa25.33■■□□□ 1.65
TSPAN4-206ENST00000397408 JAG1P78504 1218 aa25.33■■□□□ 1.65
TSPAN4-206ENST00000397408 SNAPC2Q13487 334 aa25.33■■□□□ 1.65
TSPAN4-206ENST00000397408 NAPBQ9H115 298 aa25.33■■□□□ 1.65
TSPAN4-206ENST00000397408 SWAP70Q9UH65 585 aa25.33■■□□□ 1.65
TSPAN4-206ENST00000397408 ZBTB21Q9ULJ3 1066 aa25.33■■□□□ 1.65
TSPAN4-206ENST00000397408 PHIPQ8WWQ0 1821 aa25.32■■□□□ 1.64
TSPAN4-206ENST00000397408 CCL15-CCL14A0A0B4J2E2 113 aa25.32■■□□□ 1.64
TSPAN4-206ENST00000397408 MINDY4BA8MYZ0 360 aa25.32■■□□□ 1.64
TSPAN4-206ENST00000397408 ASNSP08243 561 aa25.32■■□□□ 1.64
TSPAN4-206ENST00000397408 INHBEP58166 350 aa25.32■■□□□ 1.64
TSPAN4-206ENST00000397408 CCL15Q16663 113 aa25.32■■□□□ 1.64
TSPAN4-206ENST00000397408 CERKLQ49MI3 558 aaPredicted RBP25.32■■□□□ 1.64
TSPAN4-206ENST00000397408 TAOK2Q9UL54 1235 aa25.32■■□□□ 1.64
TSPAN4-206ENST00000397408 KCNH4Q9UQ05 1017 aa25.32■■□□□ 1.64
TSPAN4-206ENST00000397408 CA12O43570 354 aa25.31■■□□□ 1.64
TSPAN4-206ENST00000397408 GH2P01242 217 aa25.31■■□□□ 1.64
TSPAN4-206ENST00000397408 BRI3BPQ8WY22 251 aa25.31■■□□□ 1.64
TSPAN4-206ENST00000397408 RNF186Q9NXI6 227 aa25.31■■□□□ 1.64
TSPAN4-206ENST00000397408 MYH8P13535 1937 aa25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 ROBO3Q96MS0 1386 aa25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 TESPA1A2RU30 521 aaPredicted RBP25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 IGF2BP3O00425 579 aaKnown RBP eCLIP25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 CETPP11597 493 aa25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 MFAP1P55081 439 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 C16orf86Q6ZW13 317 aa25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 IFNL1Q8IU54 200 aa25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 GINM1Q9NU53 330 aa25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 TSKSQ9UJT2 592 aa25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 AFG3L2Q9Y4W6 797 aa25.3■■□□□ 1.64
TSPAN4-206ENST00000397408 TRIM75PA6NK02 468 aa25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 USP17L5A8MUK1 530 aa25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 TRPA1O75762 1119 aa25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 CDK8P49336 464 aa25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 ABCB5Q2M3G0 1257 aa25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 PTPN18Q99952 460 aa25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 SAGE1Q9NXZ1 904 aa25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 CXCL11O14625 94 aa25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 HSPD1P10809 573 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 STK11IPQ8N1F8 1099 aa25.29■■□□□ 1.64
TSPAN4-206ENST00000397408 CHMLP26374 656 aa25.28■■□□□ 1.64
TSPAN4-206ENST00000397408 BMP2KLQ5H9B9 411 aa25.28■■□□□ 1.64
TSPAN4-206ENST00000397408 ZNF280CQ8ND82 737 aa25.28■■□□□ 1.64
TSPAN4-206ENST00000397408 TBC1D2Q9BYX2 928 aa25.28■■□□□ 1.64
TSPAN4-206ENST00000397408 AS3MTQ9HBK9 375 aa25.28■■□□□ 1.64
TSPAN4-206ENST00000397408 CABP5Q9NP86 173 aa25.28■■□□□ 1.64
TSPAN4-206ENST00000397408 PTPRFP10586 1907 aa25.28■■□□□ 1.64
TSPAN4-206ENST00000397408 MPHOSPH10O00566 681 aaKnown RBP25.27■■□□□ 1.64
TSPAN4-206ENST00000397408 CTCFP49711 727 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-206ENST00000397408 SPP2Q13103 211 aa25.27■■□□□ 1.64
TSPAN4-206ENST00000397408 OTUD7BQ6GQQ9 843 aa25.27■■□□□ 1.64
TSPAN4-206ENST00000397408 IL25Q9H293 177 aa25.27■■□□□ 1.64
TSPAN4-206ENST00000397408 RAD50Q92878 1312 aa25.26■■□□□ 1.63
TSPAN4-206ENST00000397408 A0A0G2JLL6 359 aaPredicted RBP25.26■■□□□ 1.63
TSPAN4-206ENST00000397408 ALDH1A1P00352 501 aa25.26■■□□□ 1.63
TSPAN4-206ENST00000397408 HSPA8P11142 646 aaKnown RBP25.26■■□□□ 1.63
TSPAN4-206ENST00000397408 PPARAQ07869 468 aa25.26■■□□□ 1.63
TSPAN4-206ENST00000397408 RAB3GAP1Q15042 981 aa25.26■■□□□ 1.63
TSPAN4-206ENST00000397408 ALX1Q15699 326 aa25.26■■□□□ 1.63
TSPAN4-206ENST00000397408 PRRT2Q7Z6L0 340 aaPredicted RBP25.26■■□□□ 1.63
TSPAN4-206ENST00000397408 AKR1B1P15121 316 aa25.25■■□□□ 1.63
TSPAN4-206ENST00000397408 FAM43AQ8N2R8 423 aa25.25■■□□□ 1.63
TSPAN4-206ENST00000397408 RUFY2Q8WXA3 655 aa25.25■■□□□ 1.63
TSPAN4-206ENST00000397408 WDR18Q9BV38 432 aa25.25■■□□□ 1.63
TSPAN4-206ENST00000397408 ZMYM6O95789 1325 aa25.24■■□□□ 1.63
TSPAN4-206ENST00000397408 BTBD19C9JJ37 291 aa25.24■■□□□ 1.63
TSPAN4-206ENST00000397408 MOGSQ13724 837 aa25.24■■□□□ 1.63
TSPAN4-206ENST00000397408 FGAP02671 866 aa25.23■■□□□ 1.63
TSPAN4-206ENST00000397408 GUCY1A2P33402 732 aa25.23■■□□□ 1.63
TSPAN4-206ENST00000397408 SEPT2Q15019 361 aa25.23■■□□□ 1.63
TSPAN4-206ENST00000397408 GADL1Q6ZQY3 521 aa25.23■■□□□ 1.63
TSPAN4-206ENST00000397408 TMEM179Q6ZVK1 233 aa25.23■■□□□ 1.63
TSPAN4-206ENST00000397408 CCDC17Q96LX7 622 aa25.23■■□□□ 1.63
TSPAN4-206ENST00000397408 MKNK2Q9HBH9 465 aa25.23■■□□□ 1.63
TSPAN4-206ENST00000397408 TBC1D8O95759 1140 aa25.22■■□□□ 1.63
TSPAN4-206ENST00000397408 SLC3A2P08195 630 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-206ENST00000397408 LBX1P52954 281 aa25.22■■□□□ 1.63
TSPAN4-206ENST00000397408 MTMR2Q13614 643 aa25.22■■□□□ 1.63
TSPAN4-206ENST00000397408 PRDM1O75626 825 aa25.21■■□□□ 1.63
TSPAN4-206ENST00000397408 RASA1P20936 1047 aa25.21■■□□□ 1.63
TSPAN4-206ENST00000397408 HMGCS2P54868 508 aa25.21■■□□□ 1.63
TSPAN4-206ENST00000397408 FASTKD5Q7L8L6 764 aaKnown RBP25.21■■□□□ 1.63
TSPAN4-206ENST00000397408 ANKRD23Q86SG2 305 aa25.21■■□□□ 1.63
TSPAN4-206ENST00000397408 ZNF287Q9HBT7 754 aa25.21■■□□□ 1.63
TSPAN4-206ENST00000397408 LOC285556D6RIA3 1793 aa25.21■■□□□ 1.63
TSPAN4-206ENST00000397408 BACE1P56817 501 aa25.2■■□□□ 1.63
TSPAN4-206ENST00000397408 CTDSPL2Q05D32 466 aa25.2■■□□□ 1.63
TSPAN4-206ENST00000397408 PDE4BQ07343 736 aa25.2■■□□□ 1.63
TSPAN4-206ENST00000397408 TAF1CQ15572 869 aaPredicted RBP25.2■■□□□ 1.63
TSPAN4-206ENST00000397408 FEZ1Q99689 392 aa25.2■■□□□ 1.63
TSPAN4-206ENST00000397408 DSCC1Q9BVC3 393 aa25.2■■□□□ 1.63
TSPAN4-206ENST00000397408 CFHR5Q9BXR6 569 aa25.2■■□□□ 1.63
TSPAN4-206ENST00000397408 ZCCHC17Q9NP64 241 aaKnown RBP25.2■■□□□ 1.63
TSPAN4-206ENST00000397408 USP17L10C9JJH3 530 aa25.2■■□□□ 1.62
TSPAN4-206ENST00000397408 SGSM2O43147 1006 aa25.2■■□□□ 1.62
TSPAN4-206ENST00000397408 DGKZQ13574 1117 aa25.2■■□□□ 1.62
TSPAN4-206ENST00000397408 GPAT2Q6NUI2 795 aa25.2■■□□□ 1.62
TSPAN4-206ENST00000397408 CLEC10AQ8IUN9 316 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms