RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 MYH7P12883 1935 aa15.78■□□□□ 0.12
SEC13-209ENST00000397117 DOCK2Q92608 1830 aa15.78■□□□□ 0.12
SEC13-209ENST00000397117 GPAA1O43292 621 aa15.78■□□□□ 0.12
SEC13-209ENST00000397117 GSTO1P78417 241 aa15.78■□□□□ 0.12
SEC13-209ENST00000397117 MECOMQ03112 1051 aa15.78■□□□□ 0.12
SEC13-209ENST00000397117 NSUN4Q96CB9 384 aaKnown RBP15.78■□□□□ 0.12
SEC13-209ENST00000397117 CPA4Q9UI42 421 aa15.78■□□□□ 0.12
SEC13-209ENST00000397117 MGAMO43451 1857 aa15.77■□□□□ 0.12
SEC13-209ENST00000397117 PDHXO00330 501 aa15.77■□□□□ 0.12
SEC13-209ENST00000397117 PSMC4P43686 418 aa15.77■□□□□ 0.12
SEC13-209ENST00000397117 MAP4K1Q92918 833 aa15.77■□□□□ 0.12
SEC13-209ENST00000397117 OSBPP22059 807 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 RBM8AQ9Y5S9 174 aaKnown RBP15.76■□□□□ 0.11
SEC13-209ENST00000397117 MYO5AQ9Y4I1 1855 aaKnown RBP15.76■□□□□ 0.11
SEC13-209ENST00000397117 MAGEB6P1A0A0J9YX57 407 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 ECM2O94769 699 aaPredicted RBP15.76■□□□□ 0.11
SEC13-209ENST00000397117 MBD4O95243 580 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 HSPD1P10809 573 aaKnown RBP15.76■□□□□ 0.11
SEC13-209ENST00000397117 HOXD10P28358 340 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 HSPA4P34932 840 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 NOL9Q5SY16 702 aaKnown RBP15.76■□□□□ 0.11
SEC13-209ENST00000397117 CDC42EP5Q6NZY7 148 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 UBE2Q1Q7Z7E8 422 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 SLF2Q8IX21 1173 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 MIGA1Q8NAN2 632 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 DSCC1Q9BVC3 393 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 DAGLAQ9Y4D2 1042 aa15.76■□□□□ 0.11
SEC13-209ENST00000397117 U3KPZ7 1027 aaPredicted RBP15.76■□□□□ 0.11
SEC13-209ENST00000397117 LDHCP07864 332 aa15.75■□□□□ 0.11
SEC13-209ENST00000397117 GRK4P32298 578 aa15.75■□□□□ 0.11
SEC13-209ENST00000397117 ANAPC15P60006 121 aa15.75■□□□□ 0.11
SEC13-209ENST00000397117 RNF20Q5VTR2 975 aa15.75■□□□□ 0.11
SEC13-209ENST00000397117 FMNL1O95466 1100 aaPredicted RBP15.74■□□□□ 0.11
SEC13-209ENST00000397117 APPP05067 770 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 ZKSCAN1P17029 563 aaPredicted RBP15.74■□□□□ 0.11
SEC13-209ENST00000397117 GNAT2P19087 354 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 TCP10Q12799 353 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 NFIAQ12857 509 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 VPS53Q5VIR6 699 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 GPAT2Q6NUI2 795 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 ADGRA1Q86SQ6 560 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 NKX2-3Q8TAU0 364 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 ZNF384Q8TF68 577 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 STRBPQ96SI9 672 aaKnown RBP15.74■□□□□ 0.11
SEC13-209ENST00000397117 NOL10Q9BSC4 688 aaKnown RBP15.74■□□□□ 0.11
SEC13-209ENST00000397117 ARMT1Q9H993 441 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 FAM198AQ9UFP1 575 aa15.74■□□□□ 0.11
SEC13-209ENST00000397117 GJB1P08034 283 aa15.73■□□□□ 0.11
SEC13-209ENST00000397117 BCRP11274 1271 aa15.73■□□□□ 0.11
SEC13-209ENST00000397117 CCL5P13501 91 aa15.73■□□□□ 0.11
SEC13-209ENST00000397117 GJA8P48165 433 aa15.73■□□□□ 0.11
SEC13-209ENST00000397117 DIXDC1Q155Q3 683 aa15.73■□□□□ 0.11
SEC13-209ENST00000397117 CHRDL2Q6WN34 429 aa15.73■□□□□ 0.11
SEC13-209ENST00000397117 RAET1EQ8TD07 263 aa15.73■□□□□ 0.11
SEC13-209ENST00000397117 CTNNA3Q9UI47 895 aa15.73■□□□□ 0.11
SEC13-209ENST00000397117 MYPNQ86TC9 1320 aa15.73■□□□□ 0.11
SEC13-209ENST00000397117 CXCL11O14625 94 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 BAG3O95817 575 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 NECTIN1Q15223 517 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 CREB3L3Q68CJ9 461 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 ZFPM1Q8IX07 1006 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 LCORLQ8N3X6 602 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 DPF3Q92784 378 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 DOCK3Q8IZD9 2030 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 MAST2Q6P0Q8 1798 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 PATL2C9JE40 543 aaKnown RBP15.72■□□□□ 0.11
SEC13-209ENST00000397117 DDRGK1Q96HY6 314 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 NACAP1Q9BZK3 213 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 PRO3102Q9H379 93 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 USP40Q9NVE5 1235 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 AATFQ9NY61 560 aaKnown RBP eCLIP15.72■□□□□ 0.11
SEC13-209ENST00000397117 RBM27Q9P2N5 1060 aaKnown RBP15.72■□□□□ 0.11
SEC13-209ENST00000397117 PALD1Q9ULE6 856 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 SLC4A4Q9Y6R1 1079 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 MYH2Q9UKX2 1941 aa15.72■□□□□ 0.11
SEC13-209ENST00000397117 MROH7-TTC4A0A0A0MT08 1334 aa15.71■□□□□ 0.11
SEC13-209ENST00000397117 PTPRFP10586 1907 aa15.71■□□□□ 0.11
SEC13-209ENST00000397117 PHF20L1A8MW92 1017 aa15.71■□□□□ 0.11
SEC13-209ENST00000397117 SLC27A2O14975 620 aa15.71■□□□□ 0.11
SEC13-209ENST00000397117 DYNLL1P63167 89 aaKnown RBP15.71■□□□□ 0.11
SEC13-209ENST00000397117 RABEP1Q15276 862 aa15.71■□□□□ 0.11
SEC13-209ENST00000397117 CERS3Q8IU89 383 aa15.71■□□□□ 0.11
SEC13-209ENST00000397117 PARK7Q99497 189 aaKnown RBP15.71■□□□□ 0.11
SEC13-209ENST00000397117 KIF2CQ99661 725 aa15.71■□□□□ 0.11
SEC13-209ENST00000397117 RIOK1Q9BRS2 568 aaKnown RBP15.71■□□□□ 0.11
SEC13-209ENST00000397117 RNF208Q9H0X6 261 aa15.71■□□□□ 0.11
SEC13-209ENST00000397117 ATRNL1Q5VV63 1379 aa15.71■□□□□ 0.11
SEC13-209ENST00000397117 CYP2C8P10632 490 aa15.7■□□□□ 0.1
SEC13-209ENST00000397117 FCGRTP55899 365 aa15.7■□□□□ 0.1
SEC13-209ENST00000397117 PRKCZQ05513 592 aa15.7■□□□□ 0.1
SEC13-209ENST00000397117 CRNKL1Q9BZJ0 848 aaKnown RBP15.7■□□□□ 0.1
SEC13-209ENST00000397117 GABRQQ9UN88 632 aa15.7■□□□□ 0.1
SEC13-209ENST00000397117 SNX14Q9Y5W7 946 aa15.7■□□□□ 0.1
SEC13-209ENST00000397117 PHIPQ8WWQ0 1821 aa15.7■□□□□ 0.1
SEC13-209ENST00000397117 SZT2Q5T011 3432 aa15.69■□□□□ 0.1
SEC13-209ENST00000397117 FGAP02671 866 aa15.69■□□□□ 0.1
SEC13-209ENST00000397117 UBXN2AP68543 259 aa15.69■□□□□ 0.1
SEC13-209ENST00000397117 MAP3K10Q02779 954 aa15.69■□□□□ 0.1
SEC13-209ENST00000397117 IMMTQ16891 758 aaKnown RBP15.69■□□□□ 0.1
SEC13-209ENST00000397117 RASEFQ8IZ41 740 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms