RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 TBC1D2Q9BYX2 928 aa25.01■■□□□ 1.59
SEC13-207ENST00000397105 AFG3L2Q9Y4W6 797 aa25.01■■□□□ 1.59
SEC13-207ENST00000397105 USP17L5A8MUK1 530 aa25■■□□□ 1.59
SEC13-207ENST00000397105 GDF11O95390 407 aa25■■□□□ 1.59
SEC13-207ENST00000397105 SHMT1P34896 483 aa25■■□□□ 1.59
SEC13-207ENST00000397105 EVX2Q03828 476 aa25■■□□□ 1.59
SEC13-207ENST00000397105 BRI3BPQ8WY22 251 aa25■■□□□ 1.59
SEC13-207ENST00000397105 DYNLL2Q96FJ2 89 aa25■■□□□ 1.59
SEC13-207ENST00000397105 EPB41L4AQ9HCS5 686 aaPredicted RBP25■■□□□ 1.59
SEC13-207ENST00000397105 MINDY4BA8MYZ0 360 aa24.99■■□□□ 1.59
SEC13-207ENST00000397105 MYH1P12882 1939 aa24.99■■□□□ 1.59
SEC13-207ENST00000397105 MFAP1P55081 439 aaKnown RBP24.99■■□□□ 1.59
SEC13-207ENST00000397105 CWC27Q6UX04 472 aaKnown RBP24.99■■□□□ 1.59
SEC13-207ENST00000397105 PTPN18Q99952 460 aa24.99■■□□□ 1.59
SEC13-207ENST00000397105 NAPBQ9H115 298 aa24.99■■□□□ 1.59
SEC13-207ENST00000397105 AS3MTQ9HBK9 375 aa24.99■■□□□ 1.59
SEC13-207ENST00000397105 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.99■■□□□ 1.59
SEC13-207ENST00000397105 ZBTB21Q9ULJ3 1066 aa24.99■■□□□ 1.59
SEC13-207ENST00000397105 IGF2BP3O00425 579 aaKnown RBP eCLIP24.98■■□□□ 1.59
SEC13-207ENST00000397105 GH2P01242 217 aa24.98■■□□□ 1.59
SEC13-207ENST00000397105 JAG1P78504 1218 aa24.98■■□□□ 1.59
SEC13-207ENST00000397105 ABCB5Q2M3G0 1257 aa24.98■■□□□ 1.59
SEC13-207ENST00000397105 ZNF280CQ8ND82 737 aa24.98■■□□□ 1.59
SEC13-207ENST00000397105 CABP5Q9NP86 173 aa24.98■■□□□ 1.59
SEC13-207ENST00000397105 TRIM75PA6NK02 468 aa24.97■■□□□ 1.59
SEC13-207ENST00000397105 HSPA8P11142 646 aaKnown RBP24.97■■□□□ 1.59
SEC13-207ENST00000397105 C16orf86Q6ZW13 317 aa24.97■■□□□ 1.59
SEC13-207ENST00000397105 CCDC84Q86UT8 332 aaPredicted RBP24.97■■□□□ 1.59
SEC13-207ENST00000397105 TSKSQ9UJT2 592 aa24.97■■□□□ 1.59
SEC13-207ENST00000397105 SIPA1L1O43166 1804 aa24.97■■□□□ 1.59
SEC13-207ENST00000397105 NAV1Q8NEY1 1877 aa24.96■■□□□ 1.59
SEC13-207ENST00000397105 CCDC171Q6TFL3 1326 aa24.96■■□□□ 1.59
SEC13-207ENST00000397105 CDK8P49336 464 aa24.96■■□□□ 1.59
SEC13-207ENST00000397105 LBX1P52954 281 aa24.96■■□□□ 1.59
SEC13-207ENST00000397105 SPP2Q13103 211 aa24.96■■□□□ 1.59
SEC13-207ENST00000397105 VPS53Q5VIR6 699 aa24.96■■□□□ 1.59
SEC13-207ENST00000397105 FASTKD5Q7L8L6 764 aaKnown RBP24.96■■□□□ 1.59
SEC13-207ENST00000397105 SLC44A5Q8NCS7 719 aa24.96■■□□□ 1.59
SEC13-207ENST00000397105 WDR18Q9BV38 432 aa24.96■■□□□ 1.59
SEC13-207ENST00000397105 DDX60LQ5H9U9 1706 aaKnown RBP24.95■■□□□ 1.59
SEC13-207ENST00000397105 A0A0G2JLL6 359 aaPredicted RBP24.95■■□□□ 1.58
SEC13-207ENST00000397105 SMIM22K7EJ46 135 aa24.95■■□□□ 1.58
SEC13-207ENST00000397105 SHROOM1Q2M3G4 852 aaPredicted RBP24.95■■□□□ 1.58
SEC13-207ENST00000397105 PRRT2Q7Z6L0 340 aaPredicted RBP24.95■■□□□ 1.58
SEC13-207ENST00000397105 ZNF589Q86UQ0 364 aaPredicted RBP24.95■■□□□ 1.58
SEC13-207ENST00000397105 MPHOSPH10O00566 681 aaKnown RBP24.94■■□□□ 1.58
SEC13-207ENST00000397105 FOXP2O15409 715 aa24.94■■□□□ 1.58
SEC13-207ENST00000397105 SLC3A2P08195 630 aaKnown RBP24.94■■□□□ 1.58
SEC13-207ENST00000397105 RAB3GAP1Q15042 981 aa24.94■■□□□ 1.58
SEC13-207ENST00000397105 ALX1Q15699 326 aa24.94■■□□□ 1.58
SEC13-207ENST00000397105 SKAP1Q86WV1 359 aa24.94■■□□□ 1.58
SEC13-207ENST00000397105 FAM43AQ8N2R8 423 aa24.94■■□□□ 1.58
SEC13-207ENST00000397105 CCDC17Q96LX7 622 aa24.94■■□□□ 1.58
SEC13-207ENST00000397105 CFHR5Q9BXR6 569 aa24.94■■□□□ 1.58
SEC13-207ENST00000397105 ZNF287Q9HBT7 754 aa24.94■■□□□ 1.58
SEC13-207ENST00000397105 ZCCHC17Q9NP64 241 aaKnown RBP24.94■■□□□ 1.58
SEC13-207ENST00000397105 BTBD19C9JJ37 291 aa24.93■■□□□ 1.58
SEC13-207ENST00000397105 TBC1D8O95759 1140 aa24.93■■□□□ 1.58
SEC13-207ENST00000397105 HSPD1P10809 573 aaKnown RBP24.93■■□□□ 1.58
SEC13-207ENST00000397105 MOGSQ13724 837 aa24.93■■□□□ 1.58
SEC13-207ENST00000397105 ANKRD23Q86SG2 305 aa24.93■■□□□ 1.58
SEC13-207ENST00000397105 MKNK2Q9HBH9 465 aa24.93■■□□□ 1.58
SEC13-207ENST00000397105 PPARAQ07869 468 aa24.92■■□□□ 1.58
SEC13-207ENST00000397105 RUFY2Q8WXA3 655 aa24.92■■□□□ 1.58
SEC13-207ENST00000397105 PRDM10Q9NQV6 1147 aa24.92■■□□□ 1.58
SEC13-207ENST00000397105 DOCK1Q14185 1865 aa24.92■■□□□ 1.58
SEC13-207ENST00000397105 CHMLP26374 656 aa24.91■■□□□ 1.58
SEC13-207ENST00000397105 BACE1P56817 501 aa24.91■■□□□ 1.58
SEC13-207ENST00000397105 GADL1Q6ZQY3 521 aa24.91■■□□□ 1.58
SEC13-207ENST00000397105 TMEM179Q6ZVK1 233 aa24.91■■□□□ 1.58
SEC13-207ENST00000397105 STK11IPQ8N1F8 1099 aa24.91■■□□□ 1.58
SEC13-207ENST00000397105 ROBO3Q96MS0 1386 aa24.91■■□□□ 1.58
SEC13-207ENST00000397105 C19orf81C9J6K1 198 aa24.9■■□□□ 1.58
SEC13-207ENST00000397105 USP17L10C9JJH3 530 aa24.9■■□□□ 1.58
SEC13-207ENST00000397105 FGAP02671 866 aa24.9■■□□□ 1.58
SEC13-207ENST00000397105 PDE4BQ07343 736 aa24.9■■□□□ 1.58
SEC13-207ENST00000397105 BMP2KLQ5H9B9 411 aa24.9■■□□□ 1.58
SEC13-207ENST00000397105 ZFYVE28Q9HCC9 887 aa24.9■■□□□ 1.58
SEC13-207ENST00000397105 BAZ2AQ9UIF9 1905 aaKnown RBP24.9■■□□□ 1.58
SEC13-207ENST00000397105 PDHXO00330 501 aa24.89■■□□□ 1.58
SEC13-207ENST00000397105 AKR1B1P15121 316 aa24.89■■□□□ 1.58
SEC13-207ENST00000397105 GUCY1A2P33402 732 aa24.89■■□□□ 1.58
SEC13-207ENST00000397105 CRHR2Q13324 411 aa24.89■■□□□ 1.58
SEC13-207ENST00000397105 MTMR2Q13614 643 aa24.89■■□□□ 1.58
SEC13-207ENST00000397105 SEPT2Q15019 361 aa24.89■■□□□ 1.58
SEC13-207ENST00000397105 TAF1CQ15572 869 aaPredicted RBP24.89■■□□□ 1.58
SEC13-207ENST00000397105 GPAT2Q6NUI2 795 aa24.89■■□□□ 1.58
SEC13-207ENST00000397105 ZNF444Q8N0Y2 327 aaPredicted RBP24.89■■□□□ 1.58
SEC13-207ENST00000397105 PROCA1Q8NCQ7 364 aaPredicted RBP24.89■■□□□ 1.58
SEC13-207ENST00000397105 RAD50Q92878 1312 aa24.88■■□□□ 1.57
SEC13-207ENST00000397105 HMGCS2P54868 508 aa24.88■■□□□ 1.57
SEC13-207ENST00000397105 NOM1Q5C9Z4 860 aaKnown RBP24.88■■□□□ 1.57
SEC13-207ENST00000397105 SH3D19Q5HYK7 790 aa24.88■■□□□ 1.57
SEC13-207ENST00000397105 TMOD4Q9NZQ9 345 aa24.88■■□□□ 1.57
SEC13-207ENST00000397105 ZMYM6O95789 1325 aa24.87■■□□□ 1.57
SEC13-207ENST00000397105 RASA1P20936 1047 aa24.87■■□□□ 1.57
SEC13-207ENST00000397105 FEZ1Q99689 392 aa24.87■■□□□ 1.57
SEC13-207ENST00000397105 R3HDMLQ9H3Y0 253 aa24.87■■□□□ 1.57
SEC13-207ENST00000397105 ANAPC4Q9UJX5 808 aa24.87■■□□□ 1.57
SEC13-207ENST00000397105 AGTPBP1Q9UPW5 1226 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms