RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SH3D19Q5HYK7 790 aa16.81■□□□□ 0.28
SEC13-204ENST00000397099 TATDN1Q6P1N9 297 aa16.81■□□□□ 0.28
SEC13-204ENST00000397099 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
SEC13-204ENST00000397099 ARMC5Q96C12 935 aa16.81■□□□□ 0.28
SEC13-204ENST00000397099 ARHGAP39Q9C0H5 1083 aa16.81■□□□□ 0.28
SEC13-204ENST00000397099 DDX60LQ5H9U9 1706 aaKnown RBP16.81■□□□□ 0.28
SEC13-204ENST00000397099 POTEFA5A3E0 1075 aa16.8■□□□□ 0.28
SEC13-204ENST00000397099 GLRX3O76003 335 aaKnown RBP16.8■□□□□ 0.28
SEC13-204ENST00000397099 HOXD10P28358 340 aa16.8■□□□□ 0.28
SEC13-204ENST00000397099 SPP2Q13103 211 aa16.8■□□□□ 0.28
SEC13-204ENST00000397099 KBTBD3Q8NAB2 608 aa16.8■□□□□ 0.28
SEC13-204ENST00000397099 ADGRA2Q96PE1 1338 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 FMNL1O95466 1100 aaPredicted RBP16.79■□□□□ 0.28
SEC13-204ENST00000397099 BACE1P56817 501 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 CERKLQ49MI3 558 aaPredicted RBP16.79■□□□□ 0.28
SEC13-204ENST00000397099 TICAM2Q86XR7 235 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 SMCR8Q8TEV9 937 aaPredicted RBP16.79■□□□□ 0.28
SEC13-204ENST00000397099 EDC3Q96F86 508 aaKnown RBP16.79■□□□□ 0.28
SEC13-204ENST00000397099 TMEM106CQ9BVX2 250 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
SEC13-204ENST00000397099 DNAJC18Q9H819 358 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
SEC13-204ENST00000397099 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 TMOD4Q9NZQ9 345 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 SWAP70Q9UH65 585 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 ZBTB21Q9ULJ3 1066 aa16.79■□□□□ 0.28
SEC13-204ENST00000397099 USP17L10C9JJH3 530 aa16.78■□□□□ 0.28
SEC13-204ENST00000397099 MYCP01106 439 aaPredicted RBP16.78■□□□□ 0.28
SEC13-204ENST00000397099 CYP2C8P10632 490 aa16.78■□□□□ 0.28
SEC13-204ENST00000397099 OSBPP22059 807 aa16.78■□□□□ 0.28
SEC13-204ENST00000397099 PSMC4P43686 418 aa16.78■□□□□ 0.28
SEC13-204ENST00000397099 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
SEC13-204ENST00000397099 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
SEC13-204ENST00000397099 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.78■□□□□ 0.28
SEC13-204ENST00000397099 MYH8P13535 1937 aa16.78■□□□□ 0.28
SEC13-204ENST00000397099 MBD4O95243 580 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 BCRP11274 1271 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 GNAT2P19087 354 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 MX1P20591 662 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 USP14P54578 494 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 RRP1BQ14684 758 aaKnown RBP16.77■□□□□ 0.28
SEC13-204ENST00000397099 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 GIMAP6Q6P9H5 292 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 LCORLQ8N3X6 602 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 SH3TC2Q8TF17 1288 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 ZNF333Q96JL9 665 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 ARMT1Q9H993 441 aa16.77■□□□□ 0.28
SEC13-204ENST00000397099 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
SEC13-204ENST00000397099 PLCD1P51178 756 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 HMGCS2P54868 508 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 FCGRTP55899 365 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 GABPAQ06546 454 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 ABCB5Q2M3G0 1257 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 ANKRD45Q5TZF3 282 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 USP17L2Q6R6M4 530 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 GTF3C2Q8WUA4 911 aaPredicted RBP16.76■□□□□ 0.27
SEC13-204ENST00000397099 APPBP2Q92624 585 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 MGAMO43451 1857 aa16.76■□□□□ 0.27
SEC13-204ENST00000397099 ZSWIM8A7E2V4 1837 aa16.75■□□□□ 0.27
SEC13-204ENST00000397099 RNF113AO15541 343 aaKnown RBP16.75■□□□□ 0.27
SEC13-204ENST00000397099 GDF11O95390 407 aa16.75■□□□□ 0.27
SEC13-204ENST00000397099 GH2P01242 217 aa16.75■□□□□ 0.27
SEC13-204ENST00000397099 EN2P19622 333 aaPredicted RBP16.75■□□□□ 0.27
SEC13-204ENST00000397099 MTMR2Q13614 643 aa16.75■□□□□ 0.27
SEC13-204ENST00000397099 PRPF38BQ5VTL8 546 aaKnown RBP16.75■□□□□ 0.27
SEC13-204ENST00000397099 RAET1EQ8TD07 263 aa16.75■□□□□ 0.27
SEC13-204ENST00000397099 SDR42E1Q8WUS8 393 aa16.75■□□□□ 0.27
SEC13-204ENST00000397099 CCDC17Q96LX7 622 aa16.75■□□□□ 0.27
SEC13-204ENST00000397099 BAZ2AQ9UIF9 1905 aaKnown RBP16.74■□□□□ 0.27
SEC13-204ENST00000397099 CTGFP29279 349 aa16.74■□□□□ 0.27
SEC13-204ENST00000397099 SHMT1P34896 483 aa16.74■□□□□ 0.27
SEC13-204ENST00000397099 FAM110CQ1W6H9 321 aa16.74■□□□□ 0.27
SEC13-204ENST00000397099 ARPP21Q9UBL0 812 aaPredicted RBP16.74■□□□□ 0.27
SEC13-204ENST00000397099 SRRDQ9UH36 339 aa16.74■□□□□ 0.27
SEC13-204ENST00000397099 SLC4A4Q9Y6R1 1079 aa16.74■□□□□ 0.27
SEC13-204ENST00000397099 MYPNQ86TC9 1320 aa16.73■□□□□ 0.27
SEC13-204ENST00000397099 IRX3P78415 501 aaPredicted RBP16.73■□□□□ 0.27
SEC13-204ENST00000397099 TREML2Q5T2D2 321 aa16.73■□□□□ 0.27
SEC13-204ENST00000397099 C12orf60Q5U649 245 aa16.73■□□□□ 0.27
SEC13-204ENST00000397099 PI4K2BQ8TCG2 481 aa16.73■□□□□ 0.27
SEC13-204ENST00000397099 C12orf42Q96LP6 360 aa16.73■□□□□ 0.27
SEC13-204ENST00000397099 KIAA1683Q9H0B3 1180 aa16.73■□□□□ 0.27
SEC13-204ENST00000397099 PUS7LQ9H0K6 701 aaKnown RBP16.73■□□□□ 0.27
SEC13-204ENST00000397099 ZNF287Q9HBT7 754 aa16.73■□□□□ 0.27
SEC13-204ENST00000397099 STAP2Q9UGK3 403 aa16.73■□□□□ 0.27
SEC13-204ENST00000397099 RBBP6Q7Z6E9 1792 aaKnown RBP16.73■□□□□ 0.27
SEC13-204ENST00000397099 RAB3GAP1Q15042 981 aa16.72■□□□□ 0.27
SEC13-204ENST00000397099 TMEM179Q6ZVK1 233 aa16.72■□□□□ 0.27
SEC13-204ENST00000397099 STRBPQ96SI9 672 aaKnown RBP16.72■□□□□ 0.27
SEC13-204ENST00000397099 FEZ1Q99689 392 aa16.72■□□□□ 0.27
SEC13-204ENST00000397099 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
SEC13-204ENST00000397099 SH2D4AQ9H788 454 aa16.72■□□□□ 0.27
SEC13-204ENST00000397099 BIN2Q9UBW5 565 aaPredicted RBP16.72■□□□□ 0.27
SEC13-204ENST00000397099 SALL3Q9BXA9 1300 aa16.71■□□□□ 0.27
SEC13-204ENST00000397099 SBK1Q52WX2 424 aa16.71■□□□□ 0.27
SEC13-204ENST00000397099 SMC5Q8IY18 1101 aa16.71■□□□□ 0.27
SEC13-204ENST00000397099 EVI5LQ96CN4 794 aa16.71■□□□□ 0.27
SEC13-204ENST00000397099 NACAP1Q9BZK3 213 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms