RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 MYH6P13533 1939 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 TCP10Q12799 353 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 VGLL4Q14135 290 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 SEC23AQ15436 765 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 C12orf42Q96LP6 360 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 EVCP57679 992 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 HOOK2Q96ED9 719 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 BACH2Q9BYV9 841 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 VEZTQ9HBM0 779 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 FZD1Q9UP38 647 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 RBM8AQ9Y5S9 174 aaKnown RBP12.66□□□□□ -0.38
NUP98-205ENST00000397007 U3KPZ7 1027 aaPredicted RBP12.66□□□□□ -0.38
NUP98-205ENST00000397007 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 TTC6Q86TZ1 520 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 SCYL3Q8IZE3 742 aa12.66□□□□□ -0.38
NUP98-205ENST00000397007 GBA2Q9HCG7 927 aaPredicted RBP12.66□□□□□ -0.38
NUP98-205ENST00000397007 POTEEQ6S8J3 1075 aa12.65□□□□□ -0.38
NUP98-205ENST00000397007 MOB2Q70IA6 237 aa12.65□□□□□ -0.38
NUP98-205ENST00000397007 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
NUP98-205ENST00000397007 MCM9Q9NXL9 1143 aa12.65□□□□□ -0.38
NUP98-205ENST00000397007 PTPRAP18433 802 aa12.65□□□□□ -0.38
NUP98-205ENST00000397007 PICALMQ13492 652 aa12.65□□□□□ -0.38
NUP98-205ENST00000397007 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
NUP98-205ENST00000397007 CASP8AP2Q9UKL3 1982 aa12.65□□□□□ -0.38
NUP98-205ENST00000397007 SNHG28P0DPA3 235 aa12.65□□□□□ -0.39
NUP98-205ENST00000397007 CREB3L3Q68CJ9 461 aa12.65□□□□□ -0.39
NUP98-205ENST00000397007 NEDD1Q8NHV4 660 aa12.65□□□□□ -0.39
NUP98-205ENST00000397007 TMOD2Q9NZR1 351 aa12.65□□□□□ -0.39
NUP98-205ENST00000397007 INPP5BP32019 993 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 AKNAD1Q5T1N1 836 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 INCENPQ9NQS7 918 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 HTTP42858 3142 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 A0A0G2JLL6 359 aaPredicted RBP12.64□□□□□ -0.39
NUP98-205ENST00000397007 ZBTB48P10074 688 aaPredicted RBP12.64□□□□□ -0.39
NUP98-205ENST00000397007 USP5P45974 858 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 PRRT2Q7Z6L0 340 aaPredicted RBP12.64□□□□□ -0.39
NUP98-205ENST00000397007 ZBTB21Q9ULJ3 1066 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 CLMNQ96JQ2 1002 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
NUP98-205ENST00000397007 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 FRMPD3Q5JV73 1810 aa12.64□□□□□ -0.39
NUP98-205ENST00000397007 E7EWF7 191 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 CELF2O95319 508 aaKnown RBP12.63□□□□□ -0.39
NUP98-205ENST00000397007 PPATQ06203 517 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 DCAF15Q66K64 600 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 GPAT2Q6NUI2 795 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 TM6SF1Q9BZW5 370 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 MYH15Q9Y2K3 1946 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 AKR1B1P15121 316 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 HSPA6P17066 643 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 CTDSPL2Q05D32 466 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 PPIL2Q13356 520 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 ANKRD13AQ8IZ07 590 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 A0A1W2PRG0 241 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 ANAPC15P60006 121 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 CYB5R4Q7L1T6 521 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 TTC14Q96N46 770 aa12.63□□□□□ -0.39
NUP98-205ENST00000397007 FAM196BA6NMK8 535 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 IRF6O14896 467 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 ADCK5Q3MIX3 580 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 IGDCC4Q8TDY8 1250 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 CCDC17Q96LX7 622 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 TM4SF4P48230 202 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 JMYQ8N9B5 988 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 NACAP1Q9BZK3 213 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 NAPBQ9H115 298 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 ADAMTS5Q9UNA0 930 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 SLC45A1Q9Y2W3 748 aa12.62□□□□□ -0.39
NUP98-205ENST00000397007 SPRYD7Q5W111 196 aa12.61□□□□□ -0.39
NUP98-205ENST00000397007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
NUP98-205ENST00000397007 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
NUP98-205ENST00000397007 NYAP2Q9P242 653 aa12.61□□□□□ -0.39
NUP98-205ENST00000397007 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.61□□□□□ -0.39
NUP98-205ENST00000397007 CTNNA3Q9UI47 895 aa12.61□□□□□ -0.39
NUP98-205ENST00000397007 SMCHD1A6NHR9 2005 aa12.61□□□□□ -0.39
NUP98-205ENST00000397007 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
NUP98-205ENST00000397007 GMCL1P1Q8NEA9 526 aa12.61□□□□□ -0.39
NUP98-205ENST00000397007 ZKSCAN4Q969J2 545 aaPredicted RBP12.61□□□□□ -0.39
NUP98-205ENST00000397007 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
NUP98-205ENST00000397007 ZNFX1Q9P2E3 1918 aaKnown RBP12.61□□□□□ -0.39
NUP98-205ENST00000397007 HLA-DOAP06340 250 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 LBX2Q6XYB7 198 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 MTMR4Q9NYA4 1195 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 IREB2P48200 963 aaKnown RBP12.6□□□□□ -0.39
NUP98-205ENST00000397007 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 PTPN18Q99952 460 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 KIAA1683Q9H0B3 1180 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 TMX2Q9Y320 296 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 ERO1BQ86YB8 467 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 WRNIP1Q96S55 665 aa12.6□□□□□ -0.39
NUP98-205ENST00000397007 ZSWIM5Q9P217 1185 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms