RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TRIM27P14373 513 aa21.45■■□□□ 1.02
EXOSC3-202ENST00000396521 SLC17A8Q8NDX2 589 aa21.45■■□□□ 1.02
EXOSC3-202ENST00000396521 TGFBRAP1Q8WUH2 860 aa21.45■■□□□ 1.02
EXOSC3-202ENST00000396521 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.45■■□□□ 1.02
EXOSC3-202ENST00000396521 PNMA6EA0A0J9YXQ4 647 aa21.44■■□□□ 1.02
EXOSC3-202ENST00000396521 DIS3LQ8TF46 1054 aaKnown RBP21.44■■□□□ 1.02
EXOSC3-202ENST00000396521 TRIB2Q92519 343 aa21.44■■□□□ 1.02
EXOSC3-202ENST00000396521 LOC285556D6RIA3 1793 aa21.43■■□□□ 1.02
EXOSC3-202ENST00000396521 GLRX3O76003 335 aaKnown RBP21.43■■□□□ 1.02
EXOSC3-202ENST00000396521 TNNI3KQ59H18 835 aa21.43■■□□□ 1.02
EXOSC3-202ENST00000396521 C7orf61Q8IZ16 206 aa21.43■■□□□ 1.02
EXOSC3-202ENST00000396521 FPGT-TNNI3KV9GXZ4 949 aa21.43■■□□□ 1.02
EXOSC3-202ENST00000396521 FLT1P17948 1338 aa21.43■■□□□ 1.02
EXOSC3-202ENST00000396521 PRKAR2AP13861 404 aaKnown RBP21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 ZKSCAN1P17029 563 aaPredicted RBP21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 CYP2B6P20813 491 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 RGS2P41220 211 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 ERVK-9P63128 1117 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 ERVK-24P63145 666 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 OS9Q13438 667 aaPredicted RBP21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 LRIT3Q3SXY7 679 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 USP17L2Q6R6M4 530 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 MAPKAPK5Q8IW41 473 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 DOCK3Q8IZD9 2030 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 RBPJLQ9UBG7 517 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 ZBTB21Q9ULJ3 1066 aa21.42■■□□□ 1.02
EXOSC3-202ENST00000396521 MNX1P50219 401 aaPredicted RBP21.41■■□□□ 1.02
EXOSC3-202ENST00000396521 CCNA1P78396 465 aa21.41■■□□□ 1.02
EXOSC3-202ENST00000396521 POLA2Q14181 598 aa21.41■■□□□ 1.02
EXOSC3-202ENST00000396521 USP6NLQ92738 828 aa21.41■■□□□ 1.02
EXOSC3-202ENST00000396521 PALD1Q9ULE6 856 aa21.41■■□□□ 1.02
EXOSC3-202ENST00000396521 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 SOX1O00570 391 aaPredicted RBP21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 CYP2E1P05181 493 aaPredicted RBP21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 TRIM32Q13049 653 aa21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 PLEKHH3Q7Z736 793 aa21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 SSH3Q8TE77 659 aa21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 C12orf42Q96LP6 360 aa21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 DNAJC18Q9H819 358 aa21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 TXNRD2Q9NNW7 524 aa21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 SNRKQ9NRH2 765 aa21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 RABGAP1Q9Y3P9 1069 aa21.4■■□□□ 1.02
EXOSC3-202ENST00000396521 USP14P54578 494 aa21.39■■□□□ 1.01
EXOSC3-202ENST00000396521 MORN1Q5T089 497 aa21.39■■□□□ 1.01
EXOSC3-202ENST00000396521 GPR142Q7Z601 462 aa21.39■■□□□ 1.01
EXOSC3-202ENST00000396521 TDHQ8IZJ6 230 aa21.39■■□□□ 1.01
EXOSC3-202ENST00000396521 LRCH3Q96II8 777 aa21.39■■□□□ 1.01
EXOSC3-202ENST00000396521 APBA2Q99767 749 aa21.39■■□□□ 1.01
EXOSC3-202ENST00000396521 DBNDD2Q9BQY9 259 aa21.39■■□□□ 1.01
EXOSC3-202ENST00000396521 CWC22Q9HCG8 908 aaKnown RBP21.39■■□□□ 1.01
EXOSC3-202ENST00000396521 ZMYND8Q9ULU4 1186 aaPredicted RBP21.39■■□□□ 1.01
EXOSC3-202ENST00000396521 USP17L15C9J2P7 530 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 USP17L13C9JLJ4 530 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 USP17L11C9JVI0 530 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 USP17L18D6R9N7 530 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 USP17L22D6RA61 530 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 USP17L17D6RBQ6 530 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 USP17L19D6RCP7 530 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 USP17L20D6RJB6 530 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 COL6A1P12109 1028 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 ATP8B2P98198 1209 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 CACNB2Q08289 660 aaPredicted RBP21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 USP17L24Q0WX57 530 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 EHD4Q9H223 541 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 EMILIN3Q9NT22 766 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 NOP58Q9Y2X3 529 aaKnown RBP21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 A0A0C4DFX4 3053 aa21.38■■□□□ 1.01
EXOSC3-202ENST00000396521 DLL1O00548 723 aa21.37■■□□□ 1.01
EXOSC3-202ENST00000396521 SURF6O75683 361 aaKnown RBP21.37■■□□□ 1.01
EXOSC3-202ENST00000396521 JAG1P78504 1218 aa21.37■■□□□ 1.01
EXOSC3-202ENST00000396521 ZKSCAN2Q63HK3 967 aa21.37■■□□□ 1.01
EXOSC3-202ENST00000396521 TATDN1Q6P1N9 297 aa21.37■■□□□ 1.01
EXOSC3-202ENST00000396521 ADGRA1Q86SQ6 560 aa21.37■■□□□ 1.01
EXOSC3-202ENST00000396521 TTC6Q86TZ1 520 aa21.37■■□□□ 1.01
EXOSC3-202ENST00000396521 MSCO60682 206 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 GDF11O95390 407 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 CYP7A1P22680 504 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 MAGEA10P43363 369 aaPredicted RBP21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 Q3C1V9 767 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 MFSD14CQ5VZR4 134 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 LBX2Q6XYB7 198 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 CLUAP1Q96AJ1 413 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 PAGR1Q9BTK6 254 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 KIAA1683Q9H0B3 1180 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 SERPINB13Q9UIV8 391 aa21.36■■□□□ 1.01
EXOSC3-202ENST00000396521 GH2P01242 217 aa21.35■■□□□ 1.01
EXOSC3-202ENST00000396521 ZAP70P43403 619 aa21.35■■□□□ 1.01
EXOSC3-202ENST00000396521 MAP2K5Q13163 448 aa21.35■■□□□ 1.01
EXOSC3-202ENST00000396521 LHX8Q68G74 356 aa21.35■■□□□ 1.01
EXOSC3-202ENST00000396521 DEFB123Q8N688 67 aa21.35■■□□□ 1.01
EXOSC3-202ENST00000396521 EDC3Q96F86 508 aaKnown RBP21.35■■□□□ 1.01
EXOSC3-202ENST00000396521 FEZ1Q99689 392 aa21.35■■□□□ 1.01
EXOSC3-202ENST00000396521 UBE2OQ9C0C9 1292 aaKnown RBP21.35■■□□□ 1.01
EXOSC3-202ENST00000396521 PORCNQ9H237 461 aa21.35■■□□□ 1.01
EXOSC3-202ENST00000396521 PFASO15067 1338 aa21.34■■□□□ 1.01
EXOSC3-202ENST00000396521 SLC15A5A6NIM6 579 aa21.34■■□□□ 1.01
EXOSC3-202ENST00000396521 BCAR3O75815 825 aa21.34■■□□□ 1.01
EXOSC3-202ENST00000396521 USP5P45974 858 aa21.34■■□□□ 1.01
EXOSC3-202ENST00000396521 MAP3K12Q12852 859 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms