RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TACC3Q9Y6A5 838 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 LOXHD1Q8IVV2 1947 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 MROH7-TTC4A0A0A0MT08 1334 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.2□□□□□ -1.42
VPS41-203ENST00000395969 GOLGA6L6A8MZA4 724 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 hCG_1984214I3L0E3 225 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 SERPINB2P05120 415 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 GJB2P29033 226 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 RCSD1Q6JBY9 416 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 ZNF804AQ7Z570 1209 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 DGKHQ86XP1 1220 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 ZNF713Q8N859 430 aaPredicted RBP6.2□□□□□ -1.42
VPS41-203ENST00000395969 ZNF579Q8NAF0 562 aaKnown RBP6.2□□□□□ -1.42
VPS41-203ENST00000395969 FBXO41Q8TF61 875 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 SEC62Q99442 399 aaKnown RBP6.2□□□□□ -1.42
VPS41-203ENST00000395969 SMC3Q9UQE7 1217 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 PHIPQ8WWQ0 1821 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 PPP6R2O75170 966 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 MAP3K10Q02779 954 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 GABPAQ06546 454 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 SLFNL1Q499Z3 407 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 ZNF397Q8NF99 534 aaPredicted RBP6.2□□□□□ -1.42
VPS41-203ENST00000395969 NEUROD6Q96NK8 337 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 BPIFA3Q9BQP9 254 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 RNF26Q9BY78 433 aaPredicted RBP6.2□□□□□ -1.42
VPS41-203ENST00000395969 PPP1R1BQ9UD71 204 aaPredicted RBP6.2□□□□□ -1.42
VPS41-203ENST00000395969 CLEC11AQ9Y240 323 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 MYH4Q9Y623 1939 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 MYO1BO43795 1136 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 CYP2C19P33261 490 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 KMT5BQ4FZB7 885 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 FKBP1CQ5VVH2 108 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 GALNT17Q6IS24 598 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 WASF1Q92558 559 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 MASTLQ96GX5 879 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 LZTS2Q9BRK4 669 aa6.2□□□□□ -1.42
VPS41-203ENST00000395969 LDHCP07864 332 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 ZNF827Q17R98 1081 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 MEX3CQ5U5Q3 659 aaKnown RBP6.19□□□□□ -1.42
VPS41-203ENST00000395969 APOA5Q6Q788 366 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 ILDR1Q86SU0 546 aaPredicted RBP6.19□□□□□ -1.42
VPS41-203ENST00000395969 CNPY4Q8N129 248 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 FBXO18Q8NFZ0 1043 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 TNFRSF25Q93038 417 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 FOXP1Q9H334 677 aaPredicted RBP6.19□□□□□ -1.42
VPS41-203ENST00000395969 GDPD2Q9HCC8 539 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 SRP68Q9UHB9 627 aaKnown RBP6.19□□□□□ -1.42
VPS41-203ENST00000395969 CFAP45Q9UL16 551 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 MAGEB6P1A0A0J9YX57 407 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 CCDC196A0A1B0GTZ2 297 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 M0R2N6 131 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 CTAGE5O15320 804 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 PRPF3O43395 683 aaKnown RBP6.19□□□□□ -1.42
VPS41-203ENST00000395969 PRC1O43663 620 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 PRR29P0C7W0 189 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 SNHG28P0DPA3 235 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 BCAMP50895 628 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 PPARAQ07869 468 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 NAA30Q147X3 362 aaPredicted RBP6.19□□□□□ -1.42
VPS41-203ENST00000395969 C12orf60Q5U649 245 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 C16orf86Q6ZW13 317 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 ADGRA1Q86SQ6 560 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 TBC1D16Q8TBP0 767 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 UPF3BQ9BZI7 483 aaKnown RBP6.19□□□□□ -1.42
VPS41-203ENST00000395969 GINM1Q9NU53 330 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 FEZ2Q9UHY8 353 aaPredicted RBP6.19□□□□□ -1.42
VPS41-203ENST00000395969 NEDD4P46934 1319 aa6.19□□□□□ -1.42
VPS41-203ENST00000395969 NPHP1O15259 732 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 TNNT1P13805 278 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 RXRBP28702 533 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 RHBDL3P58872 404 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 WASHC4Q2M389 1173 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 CTR9Q6PD62 1173 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 CCDC129Q6ZRS4 1044 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 CYB5R4Q7L1T6 521 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 ENGASEQ8NFI3 743 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 SYTL4Q96C24 671 aaPredicted RBP6.18□□□□□ -1.42
VPS41-203ENST00000395969 IDI2Q9BXS1 227 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 TOMM22Q9NS69 142 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 DOCK1Q14185 1865 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 ESYT2A0FGR8 921 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 PTGS1P23219 599 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 TRAPPC10P48553 1259 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 GPSM2P81274 684 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 MECOMQ03112 1051 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 COL9A3Q14050 684 aaPredicted RBP6.18□□□□□ -1.42
VPS41-203ENST00000395969 GORABQ5T7V8 394 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 FOXR2Q6PJQ5 311 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 COL23A1Q86Y22 540 aaPredicted RBP6.18□□□□□ -1.42
VPS41-203ENST00000395969 LCORLQ8N3X6 602 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 MAGEB6Q8N7X4 407 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 CCDC112Q8NEF3 446 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 ZBED3Q96IU2 234 aaPredicted RBP6.18□□□□□ -1.42
VPS41-203ENST00000395969 YY1AP1Q9H869 796 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 CD209Q9NNX6 404 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 DCP1AQ9NPI6 582 aaPredicted RBP6.18□□□□□ -1.42
VPS41-203ENST00000395969 KCND1Q9NSA2 647 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 HPSEQ9Y251 543 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 WDR90Q96KV7 1748 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 PODNQ7Z5L7 613 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms