RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 C12orf42Q96LP6 360 aa8.57□□□□□ -1.04
XCR1-202ENST00000395946 GDF15Q99988 308 aa8.57□□□□□ -1.04
XCR1-202ENST00000395946 NUDT12Q9BQG2 462 aa8.57□□□□□ -1.04
XCR1-202ENST00000395946 TRIM34Q9BYJ4 488 aa8.57□□□□□ -1.04
XCR1-202ENST00000395946 GJD2Q9UKL4 321 aa8.57□□□□□ -1.04
XCR1-202ENST00000395946 FLT1P17948 1338 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 MSCO60682 206 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 GLRX3O76003 335 aaKnown RBP8.56□□□□□ -1.04
XCR1-202ENST00000395946 ECM2O94769 699 aaPredicted RBP8.56□□□□□ -1.04
XCR1-202ENST00000395946 TRIM27P14373 513 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 USP14P54578 494 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 HERVK_113P62684 666 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 CCNA1P78396 465 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 MTMR2Q13614 643 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 CRACR2BQ8N4Y2 399 aaPredicted RBP8.56□□□□□ -1.04
XCR1-202ENST00000395946 APBA2Q99767 749 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 EHD4Q9H223 541 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 C11orf49Q9H6J7 331 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 TRIOBPQ9H2D6 2365 aa8.56□□□□□ -1.04
XCR1-202ENST00000395946 ZKSCAN1P17029 563 aaPredicted RBP8.55□□□□□ -1.04
XCR1-202ENST00000395946 RGS2P41220 211 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 TNNI3KQ59H18 835 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 USP17L2Q6R6M4 530 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 LBX2Q6XYB7 198 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 CCAR1Q8IX12 1150 aaKnown RBP8.55□□□□□ -1.04
XCR1-202ENST00000395946 SSH3Q8TE77 659 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 TRIB2Q92519 343 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 ZBTB21Q9ULJ3 1066 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 RABGAP1Q9Y3P9 1069 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 FPGT-TNNI3KV9GXZ4 949 aa8.55□□□□□ -1.04
XCR1-202ENST00000395946 FAM196BA6NMK8 535 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 COL6A1P12109 1028 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 PRKAR2AP13861 404 aaKnown RBP8.54□□□□□ -1.04
XCR1-202ENST00000395946 MNX1P50219 401 aaPredicted RBP8.54□□□□□ -1.04
XCR1-202ENST00000395946 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 ERVK-24P63145 666 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 TBC1D9Q6ZT07 1266 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 TTC6Q86TZ1 520 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 CCDC84Q86UT8 332 aaPredicted RBP8.54□□□□□ -1.04
XCR1-202ENST00000395946 TDHQ8IZJ6 230 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 SH3RF3Q8TEJ3 882 aaPredicted RBP8.54□□□□□ -1.04
XCR1-202ENST00000395946 USP6NLQ92738 828 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 KIAA1683Q9H0B3 1180 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 DNAJC18Q9H819 358 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 AATFQ9NY61 560 aaKnown RBP eCLIP8.54□□□□□ -1.04
XCR1-202ENST00000395946 NOP58Q9Y2X3 529 aaKnown RBP8.54□□□□□ -1.04
XCR1-202ENST00000395946 CEP290O15078 2479 aa8.54□□□□□ -1.04
XCR1-202ENST00000395946 RANBP2P49792 3224 aaKnown RBP8.54□□□□□ -1.04
XCR1-202ENST00000395946 ATAD5Q96QE3 1844 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 PNMA6EA0A0J9YXQ4 647 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 CYP2E1P05181 493 aaPredicted RBP8.53□□□□□ -1.04
XCR1-202ENST00000395946 HOXC6P09630 235 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 OS9Q13438 667 aaPredicted RBP8.53□□□□□ -1.04
XCR1-202ENST00000395946 ZKSCAN2Q63HK3 967 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 GPR142Q7Z601 462 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 PLEKHH3Q7Z736 793 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 ERC1Q8IUD2 1116 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 C7orf61Q8IZ16 206 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 TGFBRAP1Q8WUH2 860 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.53□□□□□ -1.04
XCR1-202ENST00000395946 STAP2Q9UGK3 403 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 SERPINB13Q9UIV8 391 aa8.53□□□□□ -1.04
XCR1-202ENST00000395946 FOCADQ5VW36 1801 aa8.52□□□□□ -1.04
XCR1-202ENST00000395946 CYP2B6P20813 491 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 ATP8B2P98198 1209 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 MAP3K12Q12852 859 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 MAP2K5Q13163 448 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 RRP1BQ14684 758 aaKnown RBP8.52□□□□□ -1.05
XCR1-202ENST00000395946 TTF1Q15361 905 aaPredicted RBP8.52□□□□□ -1.05
XCR1-202ENST00000395946 HSP90AB4PQ58FF6 505 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 MORN1Q5T089 497 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 MFSD14CQ5VZR4 134 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 MAPKAPK5Q8IW41 473 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 SLC17A8Q8NDX2 589 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 DIS3LQ8TF46 1054 aaKnown RBP8.52□□□□□ -1.05
XCR1-202ENST00000395946 P2RX7Q99572 595 aaKnown RBP8.52□□□□□ -1.05
XCR1-202ENST00000395946 FEZ1Q99689 392 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 DBNDD2Q9BQY9 259 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 CWC22Q9HCG8 908 aaKnown RBP8.52□□□□□ -1.05
XCR1-202ENST00000395946 RBPJLQ9UBG7 517 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 STXBP5LQ9Y2K9 1186 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.52□□□□□ -1.05
XCR1-202ENST00000395946 IVNS1ABPQ9Y6Y0 642 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 SIPA1L1O43166 1804 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 PFASO15067 1338 aa8.52□□□□□ -1.05
XCR1-202ENST00000395946 SLC15A5A6NIM6 579 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms