RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 COLQQ9Y215 455 aaPredicted RBP10.78□□□□□ -0.68
ATG4A-205ENST00000394892 SLC45A1Q9Y2W3 748 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 DOCK2Q92608 1830 aa10.77□□□□□ -0.68
ATG4A-205ENST00000394892 GUCY1A2P33402 732 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 SHMT1P34896 483 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 PRKCZQ05513 592 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 MTFR1Q15390 333 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 TSHZ3Q63HK5 1081 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 TATDN1Q6P1N9 297 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 DPF3Q92784 378 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 PARK7Q99497 189 aaKnown RBP10.77□□□□□ -0.69
ATG4A-205ENST00000394892 HAUS7Q99871 368 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 NOL10Q9BSC4 688 aaKnown RBP10.77□□□□□ -0.69
ATG4A-205ENST00000394892 ZBTB21Q9ULJ3 1066 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 PHIPQ8WWQ0 1821 aa10.77□□□□□ -0.69
ATG4A-205ENST00000394892 MYO5AQ9Y4I1 1855 aaKnown RBP10.76□□□□□ -0.69
ATG4A-205ENST00000394892 MAST2Q6P0Q8 1798 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 H0YGN5 161 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 ADD2P35612 726 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 BACE1P56817 501 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 MTMR2Q13614 643 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 PROCA1Q8NCQ7 364 aaPredicted RBP10.76□□□□□ -0.69
ATG4A-205ENST00000394892 RAET1EQ8TD07 263 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 OTUD7AQ8TE49 926 aaPredicted RBP10.76□□□□□ -0.69
ATG4A-205ENST00000394892 SDR42E1Q8WUS8 393 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 ASCC2Q9H1I8 757 aaPredicted RBP10.76□□□□□ -0.69
ATG4A-205ENST00000394892 ARMT1Q9H993 441 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 EMILIN3Q9NT22 766 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 PAG1Q9NWQ8 432 aa10.76□□□□□ -0.69
ATG4A-205ENST00000394892 CYP2D7A0A087X1C5 515 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 MAGEB6P1A0A0J9YX57 407 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 FMNL1O95466 1100 aaPredicted RBP10.75□□□□□ -0.69
ATG4A-205ENST00000394892 GH2P01242 217 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 USP5P45974 858 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 RRP1P56182 461 aaKnown RBP10.75□□□□□ -0.69
ATG4A-205ENST00000394892 TTF1Q15361 905 aaPredicted RBP10.75□□□□□ -0.69
ATG4A-205ENST00000394892 ANKRD13CQ8N6S4 541 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 SLC44A5Q8NCS7 719 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 ACER1Q8TDN7 264 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 SHISA4Q96DD7 197 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 P2RX7Q99572 595 aaKnown RBP10.75□□□□□ -0.69
ATG4A-205ENST00000394892 HTATIP2Q9BUP3 242 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 LRRCC1Q9C099 1032 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 EHD4Q9H223 541 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 TXNRD2Q9NNW7 524 aa10.75□□□□□ -0.69
ATG4A-205ENST00000394892 DCP1AQ9NPI6 582 aaPredicted RBP10.75□□□□□ -0.69
ATG4A-205ENST00000394892 BIN2Q9UBW5 565 aaPredicted RBP10.75□□□□□ -0.69
ATG4A-205ENST00000394892 RBBP6Q7Z6E9 1792 aaKnown RBP10.75□□□□□ -0.69
ATG4A-205ENST00000394892 DOCK1Q14185 1865 aa10.74□□□□□ -0.69
ATG4A-205ENST00000394892 ASNSP08243 561 aa10.74□□□□□ -0.69
ATG4A-205ENST00000394892 HOXA7P31268 230 aaPredicted RBP10.74□□□□□ -0.69
ATG4A-205ENST00000394892 UBXN2AP68543 259 aa10.74□□□□□ -0.69
ATG4A-205ENST00000394892 TMED8Q6PL24 325 aaPredicted RBP10.74□□□□□ -0.69
ATG4A-205ENST00000394892 SIAH1Q8IUQ4 282 aa10.74□□□□□ -0.69
ATG4A-205ENST00000394892 CRACR2BQ8N4Y2 399 aaPredicted RBP10.74□□□□□ -0.69
ATG4A-205ENST00000394892 DYNLL2Q96FJ2 89 aa10.74□□□□□ -0.69
ATG4A-205ENST00000394892 PUS7LQ9H0K6 701 aaKnown RBP10.74□□□□□ -0.69
ATG4A-205ENST00000394892 SERPINB13Q9UIV8 391 aa10.74□□□□□ -0.69
ATG4A-205ENST00000394892 GJD2Q9UKL4 321 aa10.74□□□□□ -0.69
ATG4A-205ENST00000394892 NR2E3Q9Y5X4 410 aa10.74□□□□□ -0.69
ATG4A-205ENST00000394892 MYPNQ86TC9 1320 aa10.74□□□□□ -0.69
ATG4A-205ENST00000394892 A0A1W2PRG0 241 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 MBD4O95243 580 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 HLA-DOAP06340 250 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 GRK4P32298 578 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 FLT3LGP49771 235 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
ATG4A-205ENST00000394892 Q3C1V9 767 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 KIAA1755Q5JYT7 1200 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 CRBNQ96SW2 442 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 CHMP4BQ9H444 224 aaKnown RBP10.73□□□□□ -0.69
ATG4A-205ENST00000394892 RBPJLQ9UBG7 517 aa10.73□□□□□ -0.69
ATG4A-205ENST00000394892 USP17L10C9JJH3 530 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 CNMDO75829 334 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 ELNP15502 786 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 CAPN2P17655 700 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 FCGRTP55899 365 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 SEPT2Q15019 361 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 UBE3CQ15386 1083 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 FAM110CQ1W6H9 321 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 TTC6Q86TZ1 520 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 CERS3Q8IU89 383 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 CLEC10AQ8IUN9 316 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 SMCR8Q8TEV9 937 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-205ENST00000394892 OSBP2Q969R2 916 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 C12orf42Q96LP6 360 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 CRNKL1Q9BZJ0 848 aaKnown RBP10.72□□□□□ -0.69
ATG4A-205ENST00000394892 RNF208Q9H0X6 261 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 AS3MTQ9HBK9 375 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 ECHDC1Q9NTX5 307 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 GINM1Q9NU53 330 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 MCM9Q9NXL9 1143 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 MORF4L1Q9UBU8 362 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 SALL3Q9BXA9 1300 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
ATG4A-205ENST00000394892 AK9Q5TCS8 1911 aa10.72□□□□□ -0.69
ATG4A-205ENST00000394892 KIAA0100Q14667 2235 aaKnown RBP10.72□□□□□ -0.69
ATG4A-205ENST00000394892 C19orf81C9J6K1 198 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms