RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ELOA2Q8IYF1 753 aaPredicted RBP21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 MAN1B1Q9UKM7 699 aa21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 SLC12A7Q9Y666 1083 aa21.04■□□□□ 0.96
PCDHA1-202ENST00000394633 MYH6P13533 1939 aa21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 BTBD18B2RXH4 712 aa21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 PATL2C9JE40 543 aaKnown RBP21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 IRS4O14654 1257 aaPredicted RBP21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 RPS6KA4O75676 772 aa21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 UQCRFS1P1P0C7P4 283 aa21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 GRIN1Q05586 938 aa21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 TBX2Q13207 712 aaPredicted RBP21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 IFNL3Q8IZI9 196 aa21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 ST7Q9NRC1 585 aa21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 NIP7Q9Y221 180 aaKnown RBP eCLIP21.03■□□□□ 0.96
PCDHA1-202ENST00000394633 MMP1P03956 469 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 IFNAR1P17181 557 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 HSP90AA4PQ58FG1 418 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 FBXO2Q9UK22 296 aaPredicted RBP21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 NID2Q14112 1375 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 LRP5O75197 1615 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 VWA3AA6NCI4 1184 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 ARHGAP6O43182 974 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 PRR29P0C7W0 189 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 BMS1Q14692 1282 aaKnown RBP21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 NAPBQ9H115 298 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 PPP2R2CQ9Y2T4 447 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 FHOD1Q9Y613 1164 aa21.02■□□□□ 0.96
PCDHA1-202ENST00000394633 URI1O94763 535 aaPredicted RBP21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 MBD4O95243 580 aa21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 FMR1Q06787 632 aaKnown RBP eCLIP21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 DIS3L2Q8IYB7 885 aaKnown RBP21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 PROM2Q8N271 834 aa21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 KCNJ14Q9UNX9 436 aa21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 PARP3Q9Y6F1 533 aa21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 ZSCAN12O43309 604 aa21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 PTPREP23469 700 aa21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 POSTNQ15063 836 aa21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 RTCBQ9Y3I0 505 aaKnown RBP21.01■□□□□ 0.95
PCDHA1-202ENST00000394633 TADA3O75528 432 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 FGFR2P21802 821 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 MAGEB6Q8N7X4 407 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 HELBQ8NG08 1087 aaPredicted RBP21■□□□□ 0.95
PCDHA1-202ENST00000394633 WASF1Q92558 559 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 UBXN4Q92575 508 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 SERTAD1Q9UHV2 236 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 POLR2DO15514 142 aaKnown RBP21■□□□□ 0.95
PCDHA1-202ENST00000394633 ZNF18P17022 549 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 PUM3Q15397 648 aaKnown RBP21■□□□□ 0.95
PCDHA1-202ENST00000394633 AKNAD1Q5T1N1 836 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 NT5DC1Q5TFE4 455 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 ARHGEF1Q92888 912 aaKnown RBP21■□□□□ 0.95
PCDHA1-202ENST00000394633 CARD6Q9BX69 1037 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 SRRTQ9BXP5 876 aaKnown RBP21■□□□□ 0.95
PCDHA1-202ENST00000394633 ARMT1Q9H993 441 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 HOOK1Q9UJC3 728 aaKnown RBP21■□□□□ 0.95
PCDHA1-202ENST00000394633 UBR3Q6ZT12 1888 aa21■□□□□ 0.95
PCDHA1-202ENST00000394633 SARSP49591 514 aaKnown RBP20.99■□□□□ 0.95
PCDHA1-202ENST00000394633 SAFBQ15424 915 aaKnown RBP eCLIP20.99■□□□□ 0.95
PCDHA1-202ENST00000394633 SPATA5Q8NB90 893 aa20.99■□□□□ 0.95
PCDHA1-202ENST00000394633 MNS1Q8NEH6 495 aa20.99■□□□□ 0.95
PCDHA1-202ENST00000394633 LPIN2Q92539 896 aa20.99■□□□□ 0.95
PCDHA1-202ENST00000394633 BAG1Q99933 345 aaPredicted RBP20.99■□□□□ 0.95
PCDHA1-202ENST00000394633 CNNM2Q9H8M5 875 aa20.99■□□□□ 0.95
PCDHA1-202ENST00000394633 NFE2L3Q9Y4A8 694 aa20.99■□□□□ 0.95
PCDHA1-202ENST00000394633 GOLGB1Q14789 3259 aaKnown RBP20.99■□□□□ 0.95
PCDHA1-202ENST00000394633 GSG1L2A8MUP6 293 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 PDE8AO60658 829 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 NTSR2O95665 410 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 PNMA6AP0CW24 399 aaPredicted RBP20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 MORC3Q14149 939 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 ZNF827Q17R98 1081 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 TBC1D9BQ66K14 1250 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 BICDL1Q6ZP65 573 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 TC2NQ8N9U0 490 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 ZKSCAN3Q9BRR0 538 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 KRT23Q9C075 422 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 ZRANB2O95218 330 aaKnown RBP eCLIP20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 RTN1Q16799 776 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 TRMT44Q8IYL2 757 aaKnown RBP20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 GRAMD1CQ8IYS0 662 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 MLKLQ8NB16 471 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 ENOX1Q8TC92 643 aaKnown RBP20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 AK7Q96M32 723 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 FOXP1Q9H334 677 aaPredicted RBP20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 NARFQ9UHQ1 456 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 ZNF652Q9Y2D9 606 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 PCDHB6Q9Y5E3 794 aa20.98■□□□□ 0.95
PCDHA1-202ENST00000394633 CLEC4GQ6UXB4 293 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 MFSD6Q6ZSS7 791 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 FAM177A1Q8N128 213 aaPredicted RBP20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 PDILTQ8N807 584 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 SMARCE1Q969G3 411 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 MED15Q96RN5 788 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 EFCAB8A8MWE9 144 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 PRKAB2O43741 272 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 NR5A1Q13285 461 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 RASGRF1Q13972 1273 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 TXNRD1Q16881 649 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 RILPL1Q5EBL4 403 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 RRP12Q5JTH9 1297 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms