RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ARMCX5Q6P1M9 558 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 MFSD6Q6ZSS7 791 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 MIGA1Q8NAN2 632 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 MTA3Q9BTC8 594 aa17.82■□□□□ 0.44
PTBP1-204ENST00000394601 XPO4Q9C0E2 1151 aaKnown RBP17.82■□□□□ 0.44
PTBP1-204ENST00000394601 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 LOC102724159A0A0B4J2E5 919 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 PHACTR2O75167 634 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 GNAT2P19087 354 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 PWP2Q15269 919 aaKnown RBP17.81■□□□□ 0.44
PTBP1-204ENST00000394601 LONRF3Q496Y0 759 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 ERO1AQ96HE7 468 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 SLC26A6Q9BXS9 759 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 SPATA31A5Q5VU36 1347 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 SPATA31A7Q8IWB4 1347 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 BTBD18B2RXH4 712 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 NEMFO60524 1076 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 GTF2A1P52655 376 aaPredicted RBP17.81■□□□□ 0.44
PTBP1-204ENST00000394601 NOSTRINQ8IVI9 506 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 CRACR2BQ8N4Y2 399 aaPredicted RBP17.81■□□□□ 0.44
PTBP1-204ENST00000394601 DRC1Q96MC2 740 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 IKBKBO14920 756 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 SYKP43405 635 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 FUT2Q10981 343 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 RASSF4Q9H2L5 321 aa17.81■□□□□ 0.44
PTBP1-204ENST00000394601 KCNQ2O43526 872 aa17.8■□□□□ 0.44
PTBP1-204ENST00000394601 PNMA6AP0CW24 399 aaPredicted RBP17.8■□□□□ 0.44
PTBP1-204ENST00000394601 PNOCQ13519 176 aa17.8■□□□□ 0.44
PTBP1-204ENST00000394601 NFXL1Q6ZNB6 911 aa17.8■□□□□ 0.44
PTBP1-204ENST00000394601 TMC6Q7Z403 805 aa17.8■□□□□ 0.44
PTBP1-204ENST00000394601 CMTR1Q8N1G2 835 aaKnown RBP17.8■□□□□ 0.44
PTBP1-204ENST00000394601 PPARAQ07869 468 aa17.8■□□□□ 0.44
PTBP1-204ENST00000394601 SSRP1Q08945 709 aaKnown RBP17.8■□□□□ 0.44
PTBP1-204ENST00000394601 ELOA2Q8IYF1 753 aaPredicted RBP17.8■□□□□ 0.44
PTBP1-204ENST00000394601 FBXO2Q9UK22 296 aaPredicted RBP17.8■□□□□ 0.44
PTBP1-204ENST00000394601 KCNJ14Q9UNX9 436 aa17.8■□□□□ 0.44
PTBP1-204ENST00000394601 LAMB1P07942 1786 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 KIAA1551Q9HCM1 1747 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 FGRP09769 529 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 RCAN1P53805 252 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 E2F4Q16254 413 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 SDR42E1Q8WUS8 393 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 IMPACTQ9P2X3 320 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 FOXN1O15353 648 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 CUTAO60888 179 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 ATP1A3P13637 1013 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 IBSPP21815 317 aaPredicted RBP17.79■□□□□ 0.44
PTBP1-204ENST00000394601 IGHMBP2P38935 993 aaKnown RBP17.79■□□□□ 0.44
PTBP1-204ENST00000394601 SART3Q15020 963 aaKnown RBP17.79■□□□□ 0.44
PTBP1-204ENST00000394601 MYH13Q9UKX3 1938 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 CYP2C19P33261 490 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 ZSCAN26Q16670 478 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 ERFEQ4G0M1 354 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 OXER1Q8TDS5 423 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 CARD6Q9BX69 1037 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 IFNKQ9P0W0 207 aa17.79■□□□□ 0.44
PTBP1-204ENST00000394601 OAS2P29728 719 aaKnown RBP17.78■□□□□ 0.44
PTBP1-204ENST00000394601 GYG1P46976 350 aa17.78■□□□□ 0.44
PTBP1-204ENST00000394601 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
PTBP1-204ENST00000394601 PKN1Q16512 942 aa17.78■□□□□ 0.44
PTBP1-204ENST00000394601 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
PTBP1-204ENST00000394601 IQSEC3Q9UPP2 1182 aaPredicted RBP17.78■□□□□ 0.44
PTBP1-204ENST00000394601 PDE4BQ07343 736 aa17.78■□□□□ 0.44
PTBP1-204ENST00000394601 E4F1Q66K89 784 aaPredicted RBP17.78■□□□□ 0.44
PTBP1-204ENST00000394601 FOXP1Q9H334 677 aaPredicted RBP17.78■□□□□ 0.44
PTBP1-204ENST00000394601 LTBP4Q8N2S1 1624 aa17.78■□□□□ 0.44
PTBP1-204ENST00000394601 TDO2P48775 406 aa17.77■□□□□ 0.44
PTBP1-204ENST00000394601 EVX2Q03828 476 aa17.77■□□□□ 0.44
PTBP1-204ENST00000394601 NR5A1Q13285 461 aa17.77■□□□□ 0.44
PTBP1-204ENST00000394601 MCM6Q14566 821 aa17.77■□□□□ 0.44
PTBP1-204ENST00000394601 NT5DC1Q5TFE4 455 aa17.77■□□□□ 0.44
PTBP1-204ENST00000394601 CPLX2Q6PUV4 134 aaKnown RBP17.77■□□□□ 0.44
PTBP1-204ENST00000394601 FANCBQ8NB91 859 aa17.77■□□□□ 0.44
PTBP1-204ENST00000394601 DPF2Q92785 391 aa17.77■□□□□ 0.44
PTBP1-204ENST00000394601 WTAPQ15007 396 aa17.77■□□□□ 0.44
PTBP1-204ENST00000394601 RTN1Q16799 776 aa17.77■□□□□ 0.44
PTBP1-204ENST00000394601 DIS3L2Q8IYB7 885 aaKnown RBP17.77■□□□□ 0.44
PTBP1-204ENST00000394601 PTPREP23469 700 aa17.77■□□□□ 0.43
PTBP1-204ENST00000394601 PLA2G4AP47712 749 aa17.77■□□□□ 0.43
PTBP1-204ENST00000394601 SARSP49591 514 aaKnown RBP17.77■□□□□ 0.43
PTBP1-204ENST00000394601 CLEC4GQ6UXB4 293 aa17.77■□□□□ 0.43
PTBP1-204ENST00000394601 BARGINQ6ZT62 677 aa17.77■□□□□ 0.43
PTBP1-204ENST00000394601 ZNF654Q8IZM8 581 aa17.77■□□□□ 0.43
PTBP1-204ENST00000394601 BSDC1Q9NW68 430 aaPredicted RBP17.77■□□□□ 0.43
PTBP1-204ENST00000394601 KCNH3Q9ULD8 1083 aa17.77■□□□□ 0.43
PTBP1-204ENST00000394601 MYO1CO00159 1063 aa17.76■□□□□ 0.43
PTBP1-204ENST00000394601 CYP7A1P22680 504 aa17.76■□□□□ 0.43
PTBP1-204ENST00000394601 SPECC1Q5M775 1068 aa17.76■□□□□ 0.43
PTBP1-204ENST00000394601 SECISBP2LQ93073 1101 aaKnown RBP17.76■□□□□ 0.43
PTBP1-204ENST00000394601 FAM84BQ96KN1 310 aaPredicted RBP17.76■□□□□ 0.43
PTBP1-204ENST00000394601 MED15Q96RN5 788 aa17.76■□□□□ 0.43
PTBP1-204ENST00000394601 INTS13Q9NVM9 706 aa17.76■□□□□ 0.43
PTBP1-204ENST00000394601 ARGLU1Q9NWB6 273 aaPredicted RBP17.76■□□□□ 0.43
PTBP1-204ENST00000394601 MINPP1Q9UNW1 487 aa17.76■□□□□ 0.43
PTBP1-204ENST00000394601 PCDHB6Q9Y5E3 794 aa17.76■□□□□ 0.43
PTBP1-204ENST00000394601 EARS2Q5JPH6 523 aaKnown RBP17.76■□□□□ 0.43
PTBP1-204ENST00000394601 LRP2BPQ9P2M1 347 aa17.76■□□□□ 0.43
PTBP1-204ENST00000394601 SBF2Q86WG5 1849 aa17.76■□□□□ 0.43
PTBP1-204ENST00000394601 KLRK1P26718 216 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 NPY5RQ15761 445 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms