RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 USP49Q70CQ1 688 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 JCADQ9P266 1359 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 AGLP35573 1532 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 CASP8Q14790 479 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 PTPAQ15257 358 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 CCDC122Q5T0U0 273 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 NCAPH2Q6IBW4 605 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 RAD9BQ6WBX8 426 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 TMTC1Q8IUR5 882 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 EPSTI1Q96J88 318 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 NAA15Q9BXJ9 866 aaKnown RBP13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 KAT6BQ8WYB5 2073 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 ZMYND10O75800 440 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 DEXIO95424 95 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 TFRCP02786 760 aaKnown RBP13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 ITGA6P23229 1130 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 EVA1CP58658 441 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 DNAJC21Q5F1R6 531 aaKnown RBP13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 FAM204AQ9H8W3 233 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 ZSWIM5Q9P217 1185 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 HPSEQ9Y251 543 aa13.35□□□□□ -0.27
R3HDM2-203ENST00000393811 UBN2Q6ZU65 1347 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 PDE6AP16499 860 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 GUCY1A2P33402 732 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 MICALL1Q8N3F8 863 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 INTS13Q9NVM9 706 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 CYP26C1Q6V0L0 522 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 AFAP1L1Q8TED9 768 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 FAM53CQ9NYF3 392 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 MYO6Q9UM54 1294 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 CYP27B1O15528 508 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 PRDM1O75626 825 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 CCDC181Q5TID7 509 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 PRDM11Q9NQV5 511 aa13.34□□□□□ -0.27
R3HDM2-203ENST00000393811 CIAO1O76071 339 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 MMP1P03956 469 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 PTPREP23469 700 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 MCAMP43121 646 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 DNA2P51530 1060 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 NLRP5P59047 1200 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 VSNL1P62760 191 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 STIM1Q13586 685 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 FKBP15Q5T1M5 1219 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 PANX2Q96RD6 677 aa13.33□□□□□ -0.27
R3HDM2-203ENST00000393811 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 CDC25AP30304 524 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 ADD2P35612 726 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 SPAG1Q07617 926 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 EEF2KMTQ96G04 330 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 LUC7L2Q9Y383 392 aaKnown RBP13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 V9GY48 417 aaPredicted RBP13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 NEDD4P46934 1319 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 FMN2Q9NZ56 1722 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 A0A0U1RQJ8 604 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 BMP6P22004 513 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 MCM3P25205 808 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 PHKA1P46020 1223 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 TUBB4BP68371 445 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 RSRC2Q7L4I2 434 aaKnown RBP13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 GPIHBP1Q8IV16 184 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 IFNL3Q8IZI9 196 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 ATRIPQ8WXE1 791 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 CCDC47Q96A33 483 aaKnown RBP13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 TRIM47Q96LD4 638 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 PNKPQ96T60 521 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 PLIN2Q99541 437 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 HSD3B7Q9H2F3 369 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 LCMT1Q9UIC8 334 aa13.33□□□□□ -0.28
R3HDM2-203ENST00000393811 MFAP3LO75121 409 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 MCM7P33993 719 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 KRT2P35908 639 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 WHAMMP3Q1A5X7 153 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 AKNAD1Q5T1N1 836 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 SYNE4Q8N205 404 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 SYMPKQ92797 1274 aaKnown RBP13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 RNF41Q9H4P4 317 aaPredicted RBP13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 PIH1D3Q9NQM4 214 aaKnown RBP13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 FMNL1O95466 1100 aaPredicted RBP13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 UQCRFS1P1P0C7P4 283 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 TUBB2AQ13885 445 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 TUBB2BQ9BVA1 445 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 SLIT1O75093 1534 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 MACROD2A1Z1Q3 448 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 MUM1L1Q5H9M0 696 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 IQUBQ8NA54 791 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 ZCRB1Q8TBF4 217 aaKnown RBP13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 FAM71BQ8TC56 605 aa13.32□□□□□ -0.28
R3HDM2-203ENST00000393811 FANCGO15287 622 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms