RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 USP28Q96RU2 1077 aa25.77■■□□□ 1.72
HMGA2-203ENST00000393578 RBM28Q9NW13 759 aaKnown RBP25.77■■□□□ 1.72
HMGA2-203ENST00000393578 SAP30BPQ9UHR5 308 aaKnown RBP25.77■■□□□ 1.72
HMGA2-203ENST00000393578 ECM29Q5VYK3 1845 aa25.77■■□□□ 1.72
HMGA2-203ENST00000393578 C10orf71Q711Q0 1435 aa25.77■■□□□ 1.72
HMGA2-203ENST00000393578 NMT2O60551 498 aa25.76■■□□□ 1.72
HMGA2-203ENST00000393578 DBNDD1Q9H9R9 158 aa25.76■■□□□ 1.72
HMGA2-203ENST00000393578 DEXIO95424 95 aa25.76■■□□□ 1.71
HMGA2-203ENST00000393578 TFAP4Q01664 338 aa25.76■■□□□ 1.71
HMGA2-203ENST00000393578 F8W031 263 aaPredicted RBP25.75■■□□□ 1.71
HMGA2-203ENST00000393578 CEBPZQ03701 1054 aaKnown RBP25.75■■□□□ 1.71
HMGA2-203ENST00000393578 CCDC178Q5BJE1 867 aa25.75■■□□□ 1.71
HMGA2-203ENST00000393578 PGBD1Q96JS3 809 aa25.75■■□□□ 1.71
HMGA2-203ENST00000393578 RTEL1Q9NZ71 1219 aa25.75■■□□□ 1.71
HMGA2-203ENST00000393578 ZNF219Q9P2Y4 722 aaPredicted RBP25.75■■□□□ 1.71
HMGA2-203ENST00000393578 FKBP1AP62942 108 aaKnown RBP25.75■■□□□ 1.71
HMGA2-203ENST00000393578 HHIPL2Q6UWX4 724 aa25.75■■□□□ 1.71
HMGA2-203ENST00000393578 DGKHQ86XP1 1220 aa25.75■■□□□ 1.71
HMGA2-203ENST00000393578 RNF26Q9BY78 433 aaPredicted RBP25.75■■□□□ 1.71
HMGA2-203ENST00000393578 SNED1Q8TER0 1413 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 FOCADQ5VW36 1801 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 KIF28PB7ZC32 967 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 STRIP1Q5VSL9 837 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 MYSM1Q5VVJ2 828 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 RCSD1Q6JBY9 416 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 C16orf86Q6ZW13 317 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 ZNF444Q8N0Y2 327 aaPredicted RBP25.74■■□□□ 1.71
HMGA2-203ENST00000393578 ANKS1AQ92625 1134 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 MXD3Q9BW11 206 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 FTOQ9C0B1 505 aaKnown RBP eCLIP25.74■■□□□ 1.71
HMGA2-203ENST00000393578 TCP11L1Q9NUJ3 509 aa25.74■■□□□ 1.71
HMGA2-203ENST00000393578 CMTR1Q8N1G2 835 aaKnown RBP25.73■■□□□ 1.71
HMGA2-203ENST00000393578 ECE2O60344 883 aa25.73■■□□□ 1.71
HMGA2-203ENST00000393578 GUCY1A2P33402 732 aa25.73■■□□□ 1.71
HMGA2-203ENST00000393578 GRIPAP1Q4V328 841 aa25.73■■□□□ 1.71
HMGA2-203ENST00000393578 CCDC82Q8N4S0 544 aa25.73■■□□□ 1.71
HMGA2-203ENST00000393578 SUPT20HQ8NEM7 779 aa25.73■■□□□ 1.71
HMGA2-203ENST00000393578 TEKT1Q969V4 418 aa25.73■■□□□ 1.71
HMGA2-203ENST00000393578 IL17RBQ9NRM6 502 aa25.73■■□□□ 1.71
HMGA2-203ENST00000393578 POLR3EQ9NVU0 708 aa25.73■■□□□ 1.71
HMGA2-203ENST00000393578 UBE2Q2LH0YL09 131 aa25.72■■□□□ 1.71
HMGA2-203ENST00000393578 TSPY3P0CV98 308 aa25.72■■□□□ 1.71
HMGA2-203ENST00000393578 TSPY8P0CW00 308 aa25.72■■□□□ 1.71
HMGA2-203ENST00000393578 U2AF2P26368 475 aaKnown RBP eCLIP25.72■■□□□ 1.718e-8■■□□□ 13.2
HMGA2-203ENST00000393578 MYH1P12882 1939 aa25.72■■□□□ 1.71
HMGA2-203ENST00000393578 LIG1P18858 919 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 RASA1P20936 1047 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 FUT2Q10981 343 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 SLC44A5Q8NCS7 719 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 CTCFLQ8NI51 663 aaPredicted RBP25.71■■□□□ 1.71
HMGA2-203ENST00000393578 MRIQ9BWK5 157 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 PANK2Q9BZ23 570 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 CDK8P49336 464 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 AKAP17AQ02040 695 aaKnown RBP25.71■■□□□ 1.71
HMGA2-203ENST00000393578 KIAA2012Q0VF49 1180 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 GNL2Q13823 731 aaKnown RBP25.71■■□□□ 1.71
HMGA2-203ENST00000393578 BICD2Q8TD16 824 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 KCNQ5Q9NR82 932 aa25.71■■□□□ 1.71
HMGA2-203ENST00000393578 YEATS4O95619 227 aa25.7■■□□□ 1.7
HMGA2-203ENST00000393578 SCNN1DP51172 638 aa25.7■■□□□ 1.7
HMGA2-203ENST00000393578 DACT2Q5SW24 774 aa25.7■■□□□ 1.7
HMGA2-203ENST00000393578 TMTC3Q6ZXV5 915 aa25.7■■□□□ 1.7
HMGA2-203ENST00000393578 RBSNQ9H1K0 784 aa25.7■■□□□ 1.7
HMGA2-203ENST00000393578 TSPY26PQ9H489 355 aa25.7■■□□□ 1.7
HMGA2-203ENST00000393578 KAT14Q9H8E8 782 aa25.7■■□□□ 1.7
HMGA2-203ENST00000393578 PRPF3O43395 683 aaKnown RBP25.69■■□□□ 1.7
HMGA2-203ENST00000393578 MMP1P03956 469 aa25.69■■□□□ 1.7
HMGA2-203ENST00000393578 NASPP49321 788 aaPredicted RBP25.69■■□□□ 1.7
HMGA2-203ENST00000393578 TTLL6Q8N841 843 aa25.69■■□□□ 1.7
HMGA2-203ENST00000393578 MAP3K14Q99558 947 aa25.69■■□□□ 1.7
HMGA2-203ENST00000393578 WDHD1O75717 1129 aaPredicted RBP25.69■■□□□ 1.7
HMGA2-203ENST00000393578 SAFBQ15424 915 aaKnown RBP eCLIP25.69■■□□□ 1.7
HMGA2-203ENST00000393578 AOC3Q16853 763 aa25.69■■□□□ 1.7
HMGA2-203ENST00000393578 LINC00301Q8NCQ3 95 aa25.69■■□□□ 1.7
HMGA2-203ENST00000393578 DDX19AQ9NUU7 478 aaKnown RBP25.69■■□□□ 1.7
HMGA2-203ENST00000393578 USP40Q9NVE5 1235 aa25.69■■□□□ 1.7
HMGA2-203ENST00000393578 USP17L3A6NCW0 530 aa25.68■■□□□ 1.7
HMGA2-203ENST00000393578 USP17L4A6NCW7 530 aa25.68■■□□□ 1.7
HMGA2-203ENST00000393578 C21orf2O43822 256 aa25.68■■□□□ 1.7
HMGA2-203ENST00000393578 PLEKHA8P1O95397 391 aa25.68■■□□□ 1.7
HMGA2-203ENST00000393578 APOBEC3HQ6NTF7 200 aaKnown RBP25.68■■□□□ 1.7
HMGA2-203ENST00000393578 USP17L1Q7RTZ2 530 aa25.68■■□□□ 1.7
HMGA2-203ENST00000393578 CCDC125Q86Z20 511 aa25.68■■□□□ 1.7
HMGA2-203ENST00000393578 KCNG4Q8TDN1 519 aa25.68■■□□□ 1.7
HMGA2-203ENST00000393578 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.68■■□□□ 1.7
HMGA2-203ENST00000393578 DACT1Q9NYF0 836 aa25.68■■□□□ 1.7
HMGA2-203ENST00000393578 CLIC4Q9Y696 253 aa25.68■■□□□ 1.7
HMGA2-203ENST00000393578 KIF5BP33176 963 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 HDLBPQ00341 1268 aaKnown RBP25.67■■□□□ 1.7
HMGA2-203ENST00000393578 ZDHHC15Q96MV8 337 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 SCN9AQ15858 1988 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 XBP1P17861 261 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 CRKP46108 304 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 ME1P48163 572 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 PICALMQ13492 652 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 CDC42EP5Q6NZY7 148 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 PNMA1Q8ND90 353 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 NUP62CLQ9H1M0 184 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 TAOK2Q9UL54 1235 aa25.67■■□□□ 1.7
HMGA2-203ENST00000393578 STK38Q15208 465 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms