RNA–Protein interactions for RNA: ENST00000391998.3

TPM3P6-201, Transcript of tropomyosin 3 pseudogene 6, humanhuman

BASIC

Gene TPM3P6, Length 742 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P6-201ENST00000391998 ERC1Q8IUD2 1116 aa11.79□□□□□ -0.52
TPM3P6-201ENST00000391998 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
TPM3P6-201ENST00000391998 ZNF384Q8TF68 577 aa11.79□□□□□ -0.52
TPM3P6-201ENST00000391998 GDF15Q99988 308 aa11.79□□□□□ -0.52
TPM3P6-201ENST00000391998 NOP58Q9Y2X3 529 aaKnown RBP11.79□□□□□ -0.52
TPM3P6-201ENST00000391998 FPGT-TNNI3KV9GXZ4 949 aa11.79□□□□□ -0.52
TPM3P6-201ENST00000391998 USP17L15C9J2P7 530 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 USP17L13C9JLJ4 530 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 USP17L11C9JVI0 530 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 USP17L18D6R9N7 530 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 USP17L22D6RA61 530 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 USP17L17D6RBQ6 530 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 USP17L19D6RCP7 530 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 USP17L20D6RJB6 530 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 ERVK-9P63128 1117 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 ERVK-24P63145 666 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 ATP8B2P98198 1209 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 USP17L24Q0WX57 530 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 MAP3K12Q12852 859 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 MTMR2Q13614 643 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 TTF1Q15361 905 aaPredicted RBP11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 TBC1D9Q6ZT07 1266 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 P2RX7Q99572 595 aaKnown RBP11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 APBA2Q99767 749 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 CWC22Q9HCG8 908 aaKnown RBP11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 AATFQ9NY61 560 aaKnown RBP eCLIP11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 SERPINB13Q9UIV8 391 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 FLT1P17948 1338 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 CEP290O15078 2479 aa11.78□□□□□ -0.52
TPM3P6-201ENST00000391998 STRNO43815 780 aa11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 ECM2O94769 699 aaPredicted RBP11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 MFSD14CQ5VZR4 134 aa11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 TATDN1Q6P1N9 297 aa11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 PLEKHH3Q7Z736 793 aa11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 SH3RF3Q8TEJ3 882 aaPredicted RBP11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 KIAA1683Q9H0B3 1180 aa11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 SLC5A4Q9NY91 659 aa11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 ZBTB21Q9ULJ3 1066 aa11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 TRIOBPQ9H2D6 2365 aa11.77□□□□□ -0.53
TPM3P6-201ENST00000391998 SLC15A5A6NIM6 579 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 SURF6O75683 361 aaKnown RBP11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 HOXC6P09630 235 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 MS4A1P11836 297 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 MORN1Q5T089 497 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 GPR142Q7Z601 462 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 TDHQ8IZJ6 230 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 SLC17A8Q8NDX2 589 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 USP6NLQ92738 828 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 HOXC10Q9NYD6 342 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 RBPJLQ9UBG7 517 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 STAP2Q9UGK3 403 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 IVNS1ABPQ9Y6Y0 642 aa11.76□□□□□ -0.53
TPM3P6-201ENST00000391998 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 CYP2E1P05181 493 aaPredicted RBP11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 COL6A1P12109 1028 aa11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 CYP2B6P20813 491 aa11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 USP5P45974 858 aa11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 MAP2K5Q13163 448 aa11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 FAM109BQ6ICB4 259 aaPredicted RBP11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 FTSJ3Q8IY81 847 aaKnown RBP11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 MB21D1Q8N884 522 aa11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 TRIB2Q92519 343 aa11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 EDC3Q96F86 508 aaKnown RBP11.75□□□□□ -0.53
TPM3P6-201ENST00000391998 CYP7A1P22680 504 aa11.74□□□□□ -0.53
TPM3P6-201ENST00000391998 CERKLQ49MI3 558 aaPredicted RBP11.74□□□□□ -0.53
TPM3P6-201ENST00000391998 PI16Q6UXB8 463 aa11.74□□□□□ -0.53
TPM3P6-201ENST00000391998 CATSPERGQ6ZRH7 1159 aa11.74□□□□□ -0.53
TPM3P6-201ENST00000391998 MAPKAPK5Q8IW41 473 aa11.74□□□□□ -0.53
TPM3P6-201ENST00000391998 FEZ1Q99689 392 aa11.74□□□□□ -0.53
TPM3P6-201ENST00000391998 PRKAG2Q9UGJ0 569 aa11.74□□□□□ -0.53
TPM3P6-201ENST00000391998 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
TPM3P6-201ENST00000391998 STXBP5LQ9Y2K9 1186 aa11.74□□□□□ -0.53
TPM3P6-201ENST00000391998 FAM196BA6NMK8 535 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 CACNB2Q08289 660 aaPredicted RBP11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 RRP1BQ14684 758 aaKnown RBP11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 ABCB5Q2M3G0 1257 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 CCDC84Q86UT8 332 aaPredicted RBP11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 C7orf61Q8IZ16 206 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 ABRAQ8N0Z2 381 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 ARRDC4Q8NCT1 418 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 SHCBP1Q8NEM2 672 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 LPAR1Q92633 364 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 DBNDD2Q9BQY9 259 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 SH2D4AQ9H788 454 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 DNAJC18Q9H819 358 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 TXNRD2Q9NNW7 524 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 EMILIN3Q9NT22 766 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 SWAP70Q9UH65 585 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 NRBP1Q9UHY1 535 aa11.73□□□□□ -0.53
TPM3P6-201ENST00000391998 RANBP2P49792 3224 aaKnown RBP11.72□□□□□ -0.53
TPM3P6-201ENST00000391998 DNM1LO00429 736 aa11.72□□□□□ -0.53
TPM3P6-201ENST00000391998 IDH1O75874 414 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms