RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 REV1Q9UBZ9 1251 aa5.06□□□□□ -1.6
RNU6-550P-201ENST00000391057 RNF112Q9ULX5 631 aa5.06□□□□□ -1.6
RNU6-550P-201ENST00000391057 LEMD3Q9Y2U8 911 aa5.06□□□□□ -1.6
RNU6-550P-201ENST00000391057 PCDHB14Q9Y5E9 798 aa5.06□□□□□ -1.6
RNU6-550P-201ENST00000391057 PRR36Q9H6K5 1346 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 PRR19A6NJB7 356 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 LEFTY1O75610 366 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 CST3P01034 146 aaPredicted RBP5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 TGFB1P01137 390 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 MCM4P33991 863 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 ZNF165P49910 485 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 YARSP54577 528 aaKnown RBP5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 RAD51AP2Q09MP3 1159 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 TMEM201Q5SNT2 666 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 ZMYM1Q5SVZ6 1142 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 GK5Q6ZS86 529 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 MCATQ8IVS2 390 aaKnown RBP5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 SLITRK4Q8IW52 837 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 MRPL41Q8IXM3 137 aaKnown RBP5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 MIPEPQ99797 713 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 DPH2Q9BQC3 489 aaPredicted RBP5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 ACBD3Q9H3P7 528 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 PIM2Q9P1W9 311 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
RNU6-550P-201ENST00000391057 ARHGAP27Q6ZUM4 889 aa5.04□□□□□ -1.6
RNU6-550P-201ENST00000391057 REXO1Q8N1G1 1221 aaKnown RBP5.04□□□□□ -1.6
RNU6-550P-201ENST00000391057 XAGE3Q8WTP9 111 aa5.04□□□□□ -1.6
RNU6-550P-201ENST00000391057 GPRASP2Q96D09 838 aa5.04□□□□□ -1.6
RNU6-550P-201ENST00000391057 SPATA32Q96LK8 384 aa5.04□□□□□ -1.6
RNU6-550P-201ENST00000391057 LRRC4CQ9HCJ2 640 aa5.04□□□□□ -1.6
RNU6-550P-201ENST00000391057 INPP5FQ9Y2H2 1132 aa5.04□□□□□ -1.6
RNU6-550P-201ENST00000391057 CYP26A1O43174 497 aa5.03□□□□□ -1.6
RNU6-550P-201ENST00000391057 COBLO75128 1261 aa5.03□□□□□ -1.6
RNU6-550P-201ENST00000391057 SLITRK5O94991 958 aa5.03□□□□□ -1.6
RNU6-550P-201ENST00000391057 ATE1O95260 518 aa5.03□□□□□ -1.6
RNU6-550P-201ENST00000391057 FOSL1P15407 271 aa5.03□□□□□ -1.6
RNU6-550P-201ENST00000391057 CLCQ05315 142 aa5.03□□□□□ -1.6
RNU6-550P-201ENST00000391057 EHMT1Q9H9B1 1298 aa5.03□□□□□ -1.6
RNU6-550P-201ENST00000391057 IGSF5Q9NSI5 407 aa5.03□□□□□ -1.6
RNU6-550P-201ENST00000391057 GTF2IRD1Q9UHL9 959 aa5.03□□□□□ -1.6
RNU6-550P-201ENST00000391057 SCO2A0A1W2PP80 73 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 UPK3BL1B0FP48 263 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 UPK3BL2E5RIL1 263 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 GJA8P48165 433 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 COL9A2Q14055 689 aaPredicted RBP5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 ZNF746Q6NUN9 644 aaPredicted RBP5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 LETMD1Q6P1Q0 360 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 INTS5Q6P9B9 1019 aaKnown RBP5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 SLFN12Q8IYM2 578 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 PHACTR4Q8IZ21 702 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 RASGRP4Q8TDF6 673 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 CYB5D2Q8WUJ1 264 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 FERD3LQ96RJ6 166 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 PRDM5Q9NQX1 630 aaPredicted RBP5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 GMIPQ9P107 970 aa5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 TPX2Q9ULW0 747 aaKnown RBP5.02□□□□□ -1.61
RNU6-550P-201ENST00000391057 CHURC1-FNTBB4DL54 471 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 DNAJA2O60884 412 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 EOMESO95936 686 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 IMPDH2P12268 514 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 HOXA10P31260 410 aaPredicted RBP5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 SSTR4P31391 388 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 ETV3P41162 512 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 TNNI2P48788 182 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 GNL2Q13823 731 aaKnown RBP5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 LRRFIP1Q32MZ4 808 aaKnown RBP5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 OVOS1Q6IE37 1185 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 FAM181AQ8N9Y4 354 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 CAPN10Q9HC96 672 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 GINM1Q9NU53 330 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 ZNRF3Q9ULT6 936 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 MAPK8IP1Q9UQF2 711 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 EFR3BQ9Y2G0 817 aa5.01□□□□□ -1.61
RNU6-550P-201ENST00000391057 SLC22A31A6NKX4 558 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 GNAT3A8MTJ3 354 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 IGF2BP3O00425 579 aaKnown RBP eCLIP5□□□□□ -1.61
RNU6-550P-201ENST00000391057 RAG1P15918 1043 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 ITIH2P19823 946 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 CYP7A1P22680 504 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 CHMP4BP1P59074 171 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 LRP8Q14114 963 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 ARSHQ5FYA8 562 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 SFRP5Q5T4F7 317 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 FBXW10Q5XX13 1052 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 TMEM40Q8WWA1 233 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 COX4I2Q96KJ9 171 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 CCDC74BQ96LY2 380 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 HEXIM2Q96MH2 286 aaKnown RBP5□□□□□ -1.61
RNU6-550P-201ENST00000391057 ZC3H7BQ9UGR2 993 aaKnown RBP5□□□□□ -1.61
RNU6-550P-201ENST00000391057 PPT2Q9UMR5 302 aa5□□□□□ -1.61
RNU6-550P-201ENST00000391057 MEIS3P2A8K0S8 358 aa4.99□□□□□ -1.61
RNU6-550P-201ENST00000391057 CEACAM5P06731 702 aa4.99□□□□□ -1.61
RNU6-550P-201ENST00000391057 SOX9P48436 509 aa4.99□□□□□ -1.61
RNU6-550P-201ENST00000391057 CD97P48960 835 aa4.99□□□□□ -1.61
RNU6-550P-201ENST00000391057 OXCT1P55809 520 aa4.99□□□□□ -1.61
RNU6-550P-201ENST00000391057 MSMPQ1L6U9 139 aa4.99□□□□□ -1.61
RNU6-550P-201ENST00000391057 CCDC81Q6ZN84 652 aa4.99□□□□□ -1.61
RNU6-550P-201ENST00000391057 FAM214BQ7L5A3 538 aa4.99□□□□□ -1.61
RNU6-550P-201ENST00000391057 NLRC3Q7RTR2 1065 aa4.99□□□□□ -1.61
RNU6-550P-201ENST00000391057 NPM2Q86SE8 214 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms