RNA–Protein interactions for RNA: ENST00000390652.9

BCAS3-201, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS3, Length 3,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-201ENST00000390652 SCN11AQ9UI33 1791 aa12.64□□□□□ -0.39
BCAS3-201ENST00000390652 CTR9Q6PD62 1173 aa12.64□□□□□ -0.39
BCAS3-201ENST00000390652 PDLIM2Q96JY6 352 aa12.64□□□□□ -0.39
BCAS3-201ENST00000390652 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
BCAS3-201ENST00000390652 LRRC4BQ9NT99 713 aa12.64□□□□□ -0.39
BCAS3-201ENST00000390652 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
BCAS3-201ENST00000390652 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
BCAS3-201ENST00000390652 FRMPD2Q68DX3 1309 aaPredicted RBP12.64□□□□□ -0.39
BCAS3-201ENST00000390652 KCPQ6ZWJ8 1503 aa12.64□□□□□ -0.39
BCAS3-201ENST00000390652 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
BCAS3-201ENST00000390652 TRIM75PA6NK02 468 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 OFD1O75665 1012 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 BAG3O95817 575 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 ELP1O95163 1332 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 FAM170AA1A519 330 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 NRDCO43847 1150 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 CCDC96Q2M329 555 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 CCDC144BQ3MJ40 725 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 ZNF804AQ7Z570 1209 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 LRRC47Q8N1G4 583 aaKnown RBP12.63□□□□□ -0.39
BCAS3-201ENST00000390652 KRI1Q8N9T8 703 aaKnown RBP12.63□□□□□ -0.39
BCAS3-201ENST00000390652 XPO4Q9C0E2 1151 aaKnown RBP12.63□□□□□ -0.39
BCAS3-201ENST00000390652 ANKRD2Q9GZV1 360 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 DCP1AQ9NPI6 582 aaPredicted RBP12.63□□□□□ -0.39
BCAS3-201ENST00000390652 RTEL1Q9NZ71 1219 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 CCDC194A0A1B0GVG4 234 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 TNNT1P13805 278 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 CLEC4GQ6UXB4 293 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 PCDHA5Q9Y5H7 936 aa12.63□□□□□ -0.39
BCAS3-201ENST00000390652 DEXIO95424 95 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 BTDP43251 543 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 STAG2Q8N3U4 1231 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 CACTINQ8WUQ7 758 aaKnown RBP12.62□□□□□ -0.39
BCAS3-201ENST00000390652 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
BCAS3-201ENST00000390652 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 CTAGE5O15320 804 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 UBASH3AP57075 661 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 CRACR2BQ8N4Y2 399 aaPredicted RBP12.62□□□□□ -0.39
BCAS3-201ENST00000390652 PCMTD1Q96MG8 357 aaPredicted RBP12.62□□□□□ -0.39
BCAS3-201ENST00000390652 MROH7-TTC4A0A0A0MT08 1334 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 PLCD1P51178 756 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 SNW1Q13573 536 aaKnown RBP12.62□□□□□ -0.39
BCAS3-201ENST00000390652 JAKMIP3Q5VZ66 844 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
BCAS3-201ENST00000390652 GPSM2P81274 684 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 CSRNP2Q9H175 543 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 PHRF1Q9P1Y6 1649 aaKnown RBP12.61□□□□□ -0.39
BCAS3-201ENST00000390652 KRT2P35908 639 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 LETM2Q2VYF4 491 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 SMARCE1Q969G3 411 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 SFPQP23246 707 aaKnown RBP eCLIP12.61□□□□□ -0.39
BCAS3-201ENST00000390652 PRR5LQ6MZQ0 368 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 FMR1NBQ8N0W7 255 aaPredicted RBP12.61□□□□□ -0.39
BCAS3-201ENST00000390652 FAM217BQ9NTX9 383 aaPredicted RBP12.61□□□□□ -0.39
BCAS3-201ENST00000390652 FANCLQ9NW38 375 aa12.61□□□□□ -0.39
BCAS3-201ENST00000390652 HOOK1Q9UJC3 728 aaKnown RBP12.61□□□□□ -0.39
BCAS3-201ENST00000390652 VPS72Q15906 364 aa12.6□□□□□ -0.39
BCAS3-201ENST00000390652 EARS2Q5JPH6 523 aaKnown RBP12.6□□□□□ -0.39
BCAS3-201ENST00000390652 NBPF11Q86T75 865 aa12.6□□□□□ -0.39
BCAS3-201ENST00000390652 KCNF1Q9H3M0 494 aa12.6□□□□□ -0.39
BCAS3-201ENST00000390652 TTF2Q9UNY4 1162 aaKnown RBP12.6□□□□□ -0.39
BCAS3-201ENST00000390652 NAPAP54920 295 aa12.6□□□□□ -0.39
BCAS3-201ENST00000390652 PTGDRQ13258 359 aa12.6□□□□□ -0.39
BCAS3-201ENST00000390652 INF2Q27J81 1249 aa12.6□□□□□ -0.39
BCAS3-201ENST00000390652 SPTY2D1Q68D10 685 aaPredicted RBP12.6□□□□□ -0.39
BCAS3-201ENST00000390652 YEATS4O95619 227 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 IFNAR1P17181 557 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 CCT6AP40227 531 aaKnown RBP12.59□□□□□ -0.39
BCAS3-201ENST00000390652 ALDH8A1Q9H2A2 487 aaPredicted RBP12.59□□□□□ -0.39
BCAS3-201ENST00000390652 FMNL1O95466 1100 aaPredicted RBP12.59□□□□□ -0.39
BCAS3-201ENST00000390652 MMP1P03956 469 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 TPM2P07951 284 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 SLC16A2P36021 539 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 ZYXQ15942 572 aaKnown RBP12.59□□□□□ -0.39
BCAS3-201ENST00000390652 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 CCDC34Q96HJ3 373 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 FUCA2Q9BTY2 467 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 ZSWIM4Q9H7M6 989 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 SNAP25P60880 206 aa12.59□□□□□ -0.39
BCAS3-201ENST00000390652 NAA30Q147X3 362 aaPredicted RBP12.59□□□□□ -0.39
BCAS3-201ENST00000390652 SF3B3Q15393 1217 aaKnown RBP12.59□□□□□ -0.39
BCAS3-201ENST00000390652 PP2D1A8MPX8 630 aa12.58□□□□□ -0.4
BCAS3-201ENST00000390652 LIFRP42702 1097 aa12.58□□□□□ -0.4
BCAS3-201ENST00000390652 RAD51AP2Q09MP3 1159 aa12.58□□□□□ -0.4
BCAS3-201ENST00000390652 BARGINQ6ZT62 677 aa12.58□□□□□ -0.4
BCAS3-201ENST00000390652 SRBD1Q8N5C6 995 aaKnown RBP12.58□□□□□ -0.4
BCAS3-201ENST00000390652 ZNF384Q8TF68 577 aa12.58□□□□□ -0.4
BCAS3-201ENST00000390652 RIOK1Q9BRS2 568 aaKnown RBP12.58□□□□□ -0.4
BCAS3-201ENST00000390652 POLR3EQ9NVU0 708 aa12.58□□□□□ -0.4
BCAS3-201ENST00000390652 ARFGEF2Q9Y6D5 1785 aa12.58□□□□□ -0.4
BCAS3-201ENST00000390652 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
BCAS3-201ENST00000390652 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.4
BCAS3-201ENST00000390652 KRT27Q7Z3Y8 459 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms