RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SPIRE2Q8WWL2 714 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 NR4A3Q92570 626 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF592Q92610 1267 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 NELL1Q92832 810 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SMARCC1Q92922 1105 aaPredicted RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ZBTB9Q96C00 473 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 KLHDC7BQ96G42 594 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 HSH2DQ96JZ2 352 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 NSUN5Q96P11 429 aaKnown RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ARXQ96QS3 562 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 WACQ9BTA9 647 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 USP26Q9BXU7 913 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 LACRTQ9GZZ8 138 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 DNAJC25Q9H1X3 360 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ATP13A1Q9HD20 1204 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 FAM105AQ9NUU6 356 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ARHGAP20Q9P2F6 1191 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SUSD2Q9UGT4 822 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 EGFL7Q9UHF1 273 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 GTF2IRD1Q9UHL9 959 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 AP4E1Q9UPM8 1137 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 CEP131Q9UPN4 1083 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PCDHB9Q9Y5E1 797 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PCDHAC2Q9Y5I4 1007 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PARP3Q9Y6F1 533 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 COX11Q9Y6N1 276 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 NOTCH3Q9UM47 2321 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 MUC16Q8WXI7 14507 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 FAM155AB1AL88 458 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 J3QW42 95 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 OPLAHO14841 1288 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 PLSCR1O15162 318 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 GPR42O15529 346 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 GTPBP6O43824 516 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 BUB1BO60566 1050 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 TADA3O75528 432 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 LEFTY1O75610 366 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 C1RP00736 705 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 CGAP01215 116 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 GCP02774 474 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 INHAP05111 366 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 MSL3P1P0C860 447 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SNHG28P0DPA3 235 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 PRG2P13727 222 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 PFKLP17858 780 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 IGFBP6P24592 240 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 CLCN1P35523 988 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SOX18P35713 384 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ASPAP45381 313 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ABCG1P45844 678 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 LIMS1P48059 325 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SARSP49591 514 aaKnown RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 TAF6P49848 677 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 HIRAP54198 1017 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 FOXG1P55316 489 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 YBX1P67809 324 aaKnown RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 DGCR2P98153 550 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 CHRNEQ04844 493 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 TMEM62Q0P6H9 643 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 C19orf57Q0VDD7 668 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 FOXF2Q12947 444 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 MTFR1Q15390 333 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 TEAD4Q15561 434 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 DIXDC1Q155Q3 683 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 TARBP2Q15633 366 aaKnown RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 NKPD1Q17RQ9 610 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 PLEKHN1Q494U1 663 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SLC44A4Q53GD3 710 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 RALGPS1Q5JS13 557 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 FAM26FQ5R3K3 315 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 EXOSC6Q5RKV6 272 aaKnown RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 GFI1BQ5VTD9 330 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 C1orf53Q5VUE5 145 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 IER5Q5VY09 327 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SCARA3Q6AZY7 606 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 LAIR1Q6GTX8 287 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 KRTAP5-10Q6L8G5 202 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 RSBN1LQ6PCB5 846 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 Q6ZPA2 131 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 DYMQ7RTS9 669 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 HDXQ7Z353 690 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 KRT25Q7Z3Z0 450 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 TMC6Q7Z403 805 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 BTLAQ7Z6A9 289 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 THAP5Q7Z6K1 395 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 USP48Q86UV5 1035 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 LDHDQ86WU2 507 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SPPL2CQ8IUH8 684 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SRRM1Q8IYB3 904 aaKnown RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ADGRG2Q8IZP9 1017 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 TOP6BLQ8N6T0 577 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 DBF4BQ8NFT6 615 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 CABLES1Q8TDN4 633 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 IGDCC4Q8TDY8 1250 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ADAMTS19Q8TE59 1207 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 FNIP1Q8TF40 1166 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ZDHHC1Q8WTX9 485 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 CACTINQ8WUQ7 758 aaKnown RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SLC7A3Q8WY07 619 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ZCCHC14Q8WYQ9 949 aaKnown RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms