RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 XAGE2Q96GT9 111 aa14.63□□□□□ -0.07
SOD1-202ENST00000389995 SENP6Q9GZR1 1112 aaPredicted RBP14.63□□□□□ -0.07
SOD1-202ENST00000389995 A0A1B0GUL7 405 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 SMCHD1A6NHR9 2005 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 XRCC5P13010 732 aaKnown RBP14.62□□□□□ -0.07
SOD1-202ENST00000389995 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
SOD1-202ENST00000389995 PDE3AQ14432 1141 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 GPR142Q7Z601 462 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 TEX11Q8IYF3 940 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 SH3RF3Q8TEJ3 882 aaPredicted RBP14.62□□□□□ -0.07
SOD1-202ENST00000389995 SOCS4Q8WXH5 440 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 AS3MTQ9HBK9 375 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 TMOD4Q9NZQ9 345 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 FLRT1Q9NZU1 646 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
SOD1-202ENST00000389995 ZNFX1Q9P2E3 1918 aaKnown RBP14.61□□□□□ -0.07
SOD1-202ENST00000389995 GDF11O95390 407 aa14.61□□□□□ -0.07
SOD1-202ENST00000389995 BACE1P56817 501 aa14.61□□□□□ -0.07
SOD1-202ENST00000389995 ERVK-9P63128 1117 aa14.61□□□□□ -0.07
SOD1-202ENST00000389995 ERVK-24P63145 666 aa14.61□□□□□ -0.07
SOD1-202ENST00000389995 TFCP2Q12800 502 aa14.61□□□□□ -0.07
SOD1-202ENST00000389995 MORN1Q5T089 497 aa14.61□□□□□ -0.07
SOD1-202ENST00000389995 FAM109BQ6ICB4 259 aaPredicted RBP14.61□□□□□ -0.07
SOD1-202ENST00000389995 CCAR1Q8IX12 1150 aaKnown RBP14.61□□□□□ -0.07
SOD1-202ENST00000389995 NSUN4Q96CB9 384 aaKnown RBP14.61□□□□□ -0.07
SOD1-202ENST00000389995 CDX2Q99626 313 aaPredicted RBP14.61□□□□□ -0.07
SOD1-202ENST00000389995 LBHD1Q9BQE6 289 aaPredicted RBP14.61□□□□□ -0.07
SOD1-202ENST00000389995 WDR18Q9BV38 432 aa14.61□□□□□ -0.07
SOD1-202ENST00000389995 RAI14Q9P0K7 980 aa14.61□□□□□ -0.07
SOD1-202ENST00000389995 HMG20BQ9P0W2 317 aa14.61□□□□□ -0.07
SOD1-202ENST00000389995 HOXA7P31268 230 aaPredicted RBP14.6□□□□□ -0.07
SOD1-202ENST00000389995 RGS2P41220 211 aa14.6□□□□□ -0.07
SOD1-202ENST00000389995 ZNF697Q5TEC3 545 aa14.6□□□□□ -0.07
SOD1-202ENST00000389995 PLEKHH3Q7Z736 793 aa14.6□□□□□ -0.07
SOD1-202ENST00000389995 NEUROD6Q96NK8 337 aa14.6□□□□□ -0.07
SOD1-202ENST00000389995 TBC1D2Q9BYX2 928 aa14.6□□□□□ -0.07
SOD1-202ENST00000389995 DNAJC18Q9H819 358 aa14.6□□□□□ -0.07
SOD1-202ENST00000389995 PDS5AQ29RF7 1337 aaKnown RBP14.6□□□□□ -0.07
SOD1-202ENST00000389995 CNGA1P29973 690 aa14.59□□□□□ -0.07
SOD1-202ENST00000389995 MAPK4P31152 587 aa14.59□□□□□ -0.07
SOD1-202ENST00000389995 SHHQ15465 462 aa14.59□□□□□ -0.07
SOD1-202ENST00000389995 C9orf50Q5SZB4 431 aa14.59□□□□□ -0.07
SOD1-202ENST00000389995 SPATA5Q8NB90 893 aa14.59□□□□□ -0.07
SOD1-202ENST00000389995 MAFAQ8NHW3 353 aaPredicted RBP14.59□□□□□ -0.07
SOD1-202ENST00000389995 APBA2Q99767 749 aa14.59□□□□□ -0.07
SOD1-202ENST00000389995 COPRSQ9NQ92 184 aa14.59□□□□□ -0.07
SOD1-202ENST00000389995 ZNF521Q96K83 1311 aa14.59□□□□□ -0.07
SOD1-202ENST00000389995 USP17L10C9JJH3 530 aa14.58□□□□□ -0.08
SOD1-202ENST00000389995 LDHCP07864 332 aa14.58□□□□□ -0.08
SOD1-202ENST00000389995 ZYXQ15942 572 aaKnown RBP14.58□□□□□ -0.08
SOD1-202ENST00000389995 WDR78Q5VTH9 848 aa14.58□□□□□ -0.08
SOD1-202ENST00000389995 MAPKAPK5Q8IW41 473 aa14.58□□□□□ -0.08
SOD1-202ENST00000389995 TRMT44Q8IYL2 757 aaKnown RBP14.58□□□□□ -0.08
SOD1-202ENST00000389995 MYLIPQ8WY64 445 aa14.58□□□□□ -0.08
SOD1-202ENST00000389995 SEMA6BQ9H3T3 888 aa14.58□□□□□ -0.08
SOD1-202ENST00000389995 CWC22Q9HCG8 908 aaKnown RBP14.58□□□□□ -0.08
SOD1-202ENST00000389995 EMILIN3Q9NT22 766 aa14.58□□□□□ -0.08
SOD1-202ENST00000389995 AATFQ9NY61 560 aaKnown RBP eCLIP14.58□□□□□ -0.08
SOD1-202ENST00000389995 PI4KBQ9UBF8 816 aa14.58□□□□□ -0.08
SOD1-202ENST00000389995 HERC5Q9UII4 1024 aaKnown RBP14.58□□□□□ -0.08
SOD1-202ENST00000389995 CNMDO75829 334 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 ASNSP08243 561 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 RTP1P59025 263 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 GSTO1P78417 241 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 MVPQ14764 893 aaKnown RBP14.57□□□□□ -0.08
SOD1-202ENST00000389995 TRPV1Q8NER1 839 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 TGFBRAP1Q8WUH2 860 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
SOD1-202ENST00000389995 MEIS3Q99687 375 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 TTYH1Q9H313 450 aaPredicted RBP14.57□□□□□ -0.08
SOD1-202ENST00000389995 PRDM6Q9NQX0 595 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 SMC4Q9NTJ3 1288 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 SAP30BPQ9UHR5 308 aaKnown RBP14.57□□□□□ -0.08
SOD1-202ENST00000389995 PALD1Q9ULE6 856 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 ATP11BQ9Y2G3 1177 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 REV3LO60673 3130 aa14.57□□□□□ -0.08
SOD1-202ENST00000389995 C19orf81C9J6K1 198 aa14.56□□□□□ -0.08
SOD1-202ENST00000389995 CYP2C19P33261 490 aa14.56□□□□□ -0.08
SOD1-202ENST00000389995 GJC2Q5T442 439 aaPredicted RBP14.56□□□□□ -0.08
SOD1-202ENST00000389995 ANO1Q5XXA6 986 aa14.56□□□□□ -0.08
SOD1-202ENST00000389995 ADGRA1Q86SQ6 560 aa14.56□□□□□ -0.08
SOD1-202ENST00000389995 NPLOC4Q8TAT6 608 aa14.56□□□□□ -0.08
SOD1-202ENST00000389995 PRDM5Q9NQX1 630 aaPredicted RBP14.56□□□□□ -0.08
SOD1-202ENST00000389995 SNRKQ9NRH2 765 aa14.56□□□□□ -0.08
SOD1-202ENST00000389995 DDX20Q9UHI6 824 aaKnown RBP14.56□□□□□ -0.08
SOD1-202ENST00000389995 ZBTB21Q9ULJ3 1066 aa14.56□□□□□ -0.08
SOD1-202ENST00000389995 NCOR1O75376 2440 aa14.55□□□□□ -0.08
SOD1-202ENST00000389995 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
SOD1-202ENST00000389995 MCAMP43121 646 aa14.55□□□□□ -0.08
SOD1-202ENST00000389995 GORABQ5T7V8 394 aa14.55□□□□□ -0.08
SOD1-202ENST00000389995 MFSD14CQ5VZR4 134 aa14.55□□□□□ -0.08
SOD1-202ENST00000389995 CRACR2BQ8N4Y2 399 aaPredicted RBP14.55□□□□□ -0.08
SOD1-202ENST00000389995 BADQ92934 168 aa14.55□□□□□ -0.08
SOD1-202ENST00000389995 LRP2BPQ9P2M1 347 aa14.55□□□□□ -0.08
SOD1-202ENST00000389995 PRKAG2Q9UGJ0 569 aa14.55□□□□□ -0.08
SOD1-202ENST00000389995 NOB1Q9ULX3 412 aaKnown RBP14.55□□□□□ -0.08
SOD1-202ENST00000389995 AKAP2Q9Y2D5 859 aa14.55□□□□□ -0.08
SOD1-202ENST00000389995 SRGAP3O43295 1099 aa14.54□□□□□ -0.08
SOD1-202ENST00000389995 MAP4K4O95819 1239 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms