RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 TBC1D9Q6ZT07 1266 aa26.35■■□□□ 1.81
CNEP1R1-201ENST00000389134 USP6NLQ92738 828 aa26.35■■□□□ 1.81
CNEP1R1-201ENST00000389134 NEUROD6Q96NK8 337 aa26.35■■□□□ 1.81
CNEP1R1-201ENST00000389134 NOL10Q9BSC4 688 aaKnown RBP26.35■■□□□ 1.81
CNEP1R1-201ENST00000389134 COL25A1Q9BXS0 654 aaPredicted RBP26.35■■□□□ 1.81
CNEP1R1-201ENST00000389134 GINM1Q9NU53 330 aa26.35■■□□□ 1.81
CNEP1R1-201ENST00000389134 USP17L10C9JJH3 530 aa26.34■■□□□ 1.81
CNEP1R1-201ENST00000389134 ERVK-9P63128 1117 aa26.34■■□□□ 1.81
CNEP1R1-201ENST00000389134 ERVK-24P63145 666 aa26.34■■□□□ 1.81
CNEP1R1-201ENST00000389134 MDM2Q00987 491 aaPredicted RBP26.34■■□□□ 1.81
CNEP1R1-201ENST00000389134 SLFN5Q08AF3 891 aa26.34■■□□□ 1.81
CNEP1R1-201ENST00000389134 RBPJLQ9UBG7 517 aa26.34■■□□□ 1.81
CNEP1R1-201ENST00000389134 POTEB2H3BUK9 544 aa26.33■■□□□ 1.81
CNEP1R1-201ENST00000389134 PEX10O60683 326 aa26.33■■□□□ 1.81
CNEP1R1-201ENST00000389134 CCND3P30281 292 aaPredicted RBP26.33■■□□□ 1.81
CNEP1R1-201ENST00000389134 GORABQ5T7V8 394 aa26.33■■□□□ 1.81
CNEP1R1-201ENST00000389134 GPR142Q7Z601 462 aa26.33■■□□□ 1.81
CNEP1R1-201ENST00000389134 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.33■■□□□ 1.81
CNEP1R1-201ENST00000389134 API5Q9BZZ5 524 aaKnown RBP26.33■■□□□ 1.81
CNEP1R1-201ENST00000389134 Q3C1V9 767 aa26.32■■□□□ 1.8
CNEP1R1-201ENST00000389134 MORN1Q5T089 497 aa26.32■■□□□ 1.8
CNEP1R1-201ENST00000389134 PI16Q6UXB8 463 aa26.32■■□□□ 1.8
CNEP1R1-201ENST00000389134 PLEKHH3Q7Z736 793 aa26.32■■□□□ 1.8
CNEP1R1-201ENST00000389134 SH3RF3Q8TEJ3 882 aaPredicted RBP26.32■■□□□ 1.8
CNEP1R1-201ENST00000389134 APBA2Q99767 749 aa26.32■■□□□ 1.8
CNEP1R1-201ENST00000389134 NOB1Q9ULX3 412 aaKnown RBP26.32■■□□□ 1.8
CNEP1R1-201ENST00000389134 SRGAP3O43295 1099 aa26.31■■□□□ 1.8
CNEP1R1-201ENST00000389134 PLCG2P16885 1265 aa26.31■■□□□ 1.8
CNEP1R1-201ENST00000389134 ARID4AP29374 1257 aaPredicted RBP26.31■■□□□ 1.8
CNEP1R1-201ENST00000389134 CCL14Q16627 93 aa26.31■■□□□ 1.8
CNEP1R1-201ENST00000389134 FOXP4Q8IVH2 680 aaPredicted RBP26.31■■□□□ 1.8
CNEP1R1-201ENST00000389134 MEIS3Q99687 375 aa26.31■■□□□ 1.8
CNEP1R1-201ENST00000389134 PORCNQ9H237 461 aa26.31■■□□□ 1.8
CNEP1R1-201ENST00000389134 LRP2BPQ9P2M1 347 aa26.31■■□□□ 1.8
CNEP1R1-201ENST00000389134 VCANP13611 3396 aa26.3■■□□□ 1.8
CNEP1R1-201ENST00000389134 MAST2Q6P0Q8 1798 aa26.3■■□□□ 1.8
CNEP1R1-201ENST00000389134 BAG3O95817 575 aa26.3■■□□□ 1.8
CNEP1R1-201ENST00000389134 METTL16Q86W50 562 aaKnown RBP26.3■■□□□ 1.8
CNEP1R1-201ENST00000389134 LBHD1Q9BQE6 289 aaPredicted RBP26.3■■□□□ 1.8
CNEP1R1-201ENST00000389134 TRIM34Q9BYJ4 488 aa26.3■■□□□ 1.8
CNEP1R1-201ENST00000389134 PRUNE2Q8WUY3 3088 aa26.3■■□□□ 1.8
CNEP1R1-201ENST00000389134 CRACR2BQ8N4Y2 399 aaPredicted RBP26.29■■□□□ 1.8
CNEP1R1-201ENST00000389134 GUCD1Q96NT3 240 aa26.29■■□□□ 1.8
CNEP1R1-201ENST00000389134 PAGR1Q9BTK6 254 aa26.29■■□□□ 1.8
CNEP1R1-201ENST00000389134 MYO5AQ9Y4I1 1855 aaKnown RBP26.29■■□□□ 1.8
CNEP1R1-201ENST00000389134 EYSQ5T1H1 3165 aa26.28■■□□□ 1.8
CNEP1R1-201ENST00000389134 MYH1P12882 1939 aa26.28■■□□□ 1.8
CNEP1R1-201ENST00000389134 UQCRFS1P1P0C7P4 283 aa26.28■■□□□ 1.8
CNEP1R1-201ENST00000389134 JAG1P78504 1218 aa26.28■■□□□ 1.8
CNEP1R1-201ENST00000389134 MTX1Q13505 466 aa26.28■■□□□ 1.8
CNEP1R1-201ENST00000389134 CWC22Q9HCG8 908 aaKnown RBP26.28■■□□□ 1.8
CNEP1R1-201ENST00000389134 GLRX3O76003 335 aaKnown RBP26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 GNAI3P08754 354 aa26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 MCAMP43121 646 aa26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 PPP4CP60510 307 aa26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 MAP2K5Q13163 448 aa26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 MFSD14CQ5VZR4 134 aa26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 USP17L2Q6R6M4 530 aa26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 SENP6Q9GZR1 1112 aaPredicted RBP26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 DNAJC18Q9H819 358 aa26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 AATFQ9NY61 560 aaKnown RBP eCLIP26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 ZBTB21Q9ULJ3 1066 aa26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.27■■□□□ 1.8
CNEP1R1-201ENST00000389134 GDF11O95390 407 aa26.26■■□□□ 1.79
CNEP1R1-201ENST00000389134 CT47B1P0C2W7 299 aaPredicted RBP26.26■■□□□ 1.79
CNEP1R1-201ENST00000389134 CCNA1P78396 465 aa26.26■■□□□ 1.79
CNEP1R1-201ENST00000389134 NAA16Q6N069 864 aaPredicted RBP26.26■■□□□ 1.79
CNEP1R1-201ENST00000389134 MAPKAPK5Q8IW41 473 aa26.26■■□□□ 1.79
CNEP1R1-201ENST00000389134 TGFBRAP1Q8WUH2 860 aa26.26■■□□□ 1.79
CNEP1R1-201ENST00000389134 EDC3Q96F86 508 aaKnown RBP26.26■■□□□ 1.79
CNEP1R1-201ENST00000389134 RABGAP1Q9Y3P9 1069 aa26.26■■□□□ 1.79
CNEP1R1-201ENST00000389134 MSCO60682 206 aa26.25■■□□□ 1.79
CNEP1R1-201ENST00000389134 EMILIN3Q9NT22 766 aa26.25■■□□□ 1.79
CNEP1R1-201ENST00000389134 RLFQ13129 1914 aa26.25■■□□□ 1.79
CNEP1R1-201ENST00000389134 FLT1P17948 1338 aa26.24■■□□□ 1.79
CNEP1R1-201ENST00000389134 ZNF697Q5TEC3 545 aa26.24■■□□□ 1.79
CNEP1R1-201ENST00000389134 POTEEQ6S8J3 1075 aa26.24■■□□□ 1.79
CNEP1R1-201ENST00000389134 ATF7IPQ6VMQ6 1270 aa26.24■■□□□ 1.79
CNEP1R1-201ENST00000389134 PRKAG2Q9UGJ0 569 aa26.24■■□□□ 1.79
CNEP1R1-201ENST00000389134 LTBP2Q14767 1821 aa26.23■■□□□ 1.79
CNEP1R1-201ENST00000389134 SHROOM1Q2M3G4 852 aaPredicted RBP26.23■■□□□ 1.79
CNEP1R1-201ENST00000389134 LPAR1Q92633 364 aa26.23■■□□□ 1.79
CNEP1R1-201ENST00000389134 FAM161BQ96MY7 647 aa26.23■■□□□ 1.79
CNEP1R1-201ENST00000389134 DDX20Q9UHI6 824 aaKnown RBP26.23■■□□□ 1.79
CNEP1R1-201ENST00000389134 PALD1Q9ULE6 856 aa26.23■■□□□ 1.79
CNEP1R1-201ENST00000389134 HLA-DOAP06340 250 aa26.22■■□□□ 1.79
CNEP1R1-201ENST00000389134 C12orf42Q96LP6 360 aa26.22■■□□□ 1.79
CNEP1R1-201ENST00000389134 TTC28Q96AY4 2481 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 SLC15A5A6NIM6 579 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 USP17L15C9J2P7 530 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 USP17L13C9JLJ4 530 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 USP17L11C9JVI0 530 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 USP17L18D6R9N7 530 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 USP17L22D6RA61 530 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 USP17L17D6RBQ6 530 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 USP17L19D6RCP7 530 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 USP17L20D6RJB6 530 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 USP17L24Q0WX57 530 aa26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 G3BP1Q13283 466 aaKnown RBP eCLIP26.21■■□□□ 1.79
CNEP1R1-201ENST00000389134 CDCA7LQ96GN5 454 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms