RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 TDO2P48775 406 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 DPCR1Q3MIW9 517 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 TMED8Q6PL24 325 aaPredicted RBP10.25□□□□□ -0.77
GPNMB-202ENST00000381990 BRAPQ7Z569 592 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 ADGRA1Q86SQ6 560 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 LINC00301Q8NCQ3 95 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 MNS1Q8NEH6 495 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 CNNM2Q9H8M5 875 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 NCOA5Q9HCD5 579 aaKnown RBP10.25□□□□□ -0.77
GPNMB-202ENST00000381990 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.25□□□□□ -0.77
GPNMB-202ENST00000381990 ANGEL1Q9UNK9 670 aaKnown RBP10.25□□□□□ -0.77
GPNMB-202ENST00000381990 XDHP47989 1333 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 ERICH4A6NGS2 130 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 ZSCAN12O43309 604 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 SLC3A2P08195 630 aaKnown RBP10.25□□□□□ -0.77
GPNMB-202ENST00000381990 GPS2Q13227 327 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 SF3A1Q15459 793 aaKnown RBP10.25□□□□□ -0.77
GPNMB-202ENST00000381990 CYB5R4Q7L1T6 521 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 ILDR1Q86SU0 546 aaPredicted RBP10.25□□□□□ -0.77
GPNMB-202ENST00000381990 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 ANKIB1Q9P2G1 1089 aa10.25□□□□□ -0.77
GPNMB-202ENST00000381990 GOLGA8BA8MQT2 603 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 B4E1Z4 1266 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 PLA2G4AP47712 749 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 NDUFA8P51970 172 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 DDR1Q08345 913 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 AKNAD1Q5T1N1 836 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 RIOK1Q9BRS2 568 aaKnown RBP10.24□□□□□ -0.77
GPNMB-202ENST00000381990 KRT23Q9C075 422 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 NEDD4P46934 1319 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 POLRMTO00411 1230 aaKnown RBP10.24□□□□□ -0.77
GPNMB-202ENST00000381990 SH2B2O14492 632 aaPredicted RBP10.24□□□□□ -0.77
GPNMB-202ENST00000381990 TADA3O75528 432 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 NCAPHQ15003 741 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 STK38Q15208 465 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 MUM1L1Q5H9M0 696 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 C15orf52Q6ZUT6 534 aaKnown RBP10.24□□□□□ -0.77
GPNMB-202ENST00000381990 TXNRD3Q86VQ6 643 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 RBM17Q96I25 401 aaKnown RBP10.24□□□□□ -0.77
GPNMB-202ENST00000381990 UBXN6Q9BZV1 441 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 TMX1Q9H3N1 280 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 ST7Q9NRC1 585 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 HPS5Q9UPZ3 1129 aa10.24□□□□□ -0.77
GPNMB-202ENST00000381990 A0A1B0GVL5 298 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 CTDSPL2Q05D32 466 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 MFSD6Q6ZSS7 791 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 ZNF384Q8TF68 577 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 STAG1Q8WVM7 1258 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 NSUN4Q96CB9 384 aaKnown RBP10.23□□□□□ -0.77
GPNMB-202ENST00000381990 MAST2Q6P0Q8 1798 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 SPTLC2O15270 562 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 HOXA10P31260 410 aaPredicted RBP10.23□□□□□ -0.77
GPNMB-202ENST00000381990 FANCCQ00597 558 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 MECOMQ03112 1051 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 SPTY2D1Q68D10 685 aaPredicted RBP10.23□□□□□ -0.77
GPNMB-202ENST00000381990 TRIM65Q6PJ69 517 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 GPR161Q8N6U8 529 aaKnown RBP10.23□□□□□ -0.77
GPNMB-202ENST00000381990 RNF41Q9H4P4 317 aaPredicted RBP10.23□□□□□ -0.77
GPNMB-202ENST00000381990 CCDC88AQ3V6T2 1871 aa10.23□□□□□ -0.77
GPNMB-202ENST00000381990 KLRG2A4D1S0 409 aaPredicted RBP10.22□□□□□ -0.77
GPNMB-202ENST00000381990 BBOX1O75936 387 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 ZNF202O95125 648 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 APBA3O96018 575 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 CMA1P23946 247 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 LIFRP42702 1097 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 NKX2-3Q8TAU0 364 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 IGDCC4Q8TDY8 1250 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 CRAMP1Q96RY5 1269 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 BRIP1Q9BX63 1249 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 ANAPC4Q9UJX5 808 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 CPLX1O14810 134 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 ARHGAP6O43182 974 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 PPARAQ07869 468 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 ZNF827Q17R98 1081 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 JAKMIP3Q5VZ66 844 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 ZNF804AQ7Z570 1209 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 SGMS1Q86VZ5 419 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 NLGN1Q8N2Q7 840 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 WDR66Q8TBY9 1149 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 SDR42E1Q8WUS8 393 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 AKT1S1Q96B36 256 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 MTA3Q9BTC8 594 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 ZSWIM5Q9P217 1185 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 TACC3Q9Y6A5 838 aa10.22□□□□□ -0.77
GPNMB-202ENST00000381990 A0A087WWV3 80 aa10.21□□□□□ -0.77
GPNMB-202ENST00000381990 ATP2B4P23634 1241 aa10.21□□□□□ -0.77
GPNMB-202ENST00000381990 HNRNPH2P55795 449 aaKnown RBP10.21□□□□□ -0.77
GPNMB-202ENST00000381990 DYNLL1P63167 89 aaKnown RBP10.21□□□□□ -0.77
GPNMB-202ENST00000381990 TMEM67Q5HYA8 995 aa10.21□□□□□ -0.77
GPNMB-202ENST00000381990 APOA5Q6Q788 366 aa10.21□□□□□ -0.77
GPNMB-202ENST00000381990 FLAD1Q8NFF5 587 aa10.21□□□□□ -0.77
GPNMB-202ENST00000381990 INCENPQ9NQS7 918 aa10.21□□□□□ -0.77
GPNMB-202ENST00000381990 PARP3Q9Y6F1 533 aa10.21□□□□□ -0.77
GPNMB-202ENST00000381990 IFIT3O14879 490 aaKnown RBP10.21□□□□□ -0.78
GPNMB-202ENST00000381990 FDPSP14324 419 aaKnown RBP10.21□□□□□ -0.78
GPNMB-202ENST00000381990 RXRBP28702 533 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 PRDX5P30044 214 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 UBASH3AP57075 661 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 GPSM2P81274 684 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 MYL5Q02045 173 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms