RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 STK24Q9Y6E0 443 aa16.67■□□□□ 0.26
SNPH-202ENST00000381873 TUBBP07437 444 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 CCDC122Q5T0U0 273 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 CAPZA3Q96KX2 299 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 PPRC1Q5VV67 1664 aaKnown RBP16.66■□□□□ 0.26
SNPH-202ENST00000381873 ERBB3P21860 1342 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
SNPH-202ENST00000381873 HERC4Q5GLZ8 1057 aaPredicted RBP16.66■□□□□ 0.26
SNPH-202ENST00000381873 FAM173BQ6P4H8 233 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 CCDC117Q8IWD4 279 aaPredicted RBP16.66■□□□□ 0.26
SNPH-202ENST00000381873 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 SNX29Q8TEQ0 813 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 TGFBRAP1Q8WUH2 860 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 MYL10Q9BUA6 226 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 MTRF1LQ9UGC7 380 aaKnown RBP16.66■□□□□ 0.26
SNPH-202ENST00000381873 EXOC7Q9UPT5 735 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 PPIP5K2O43314 1243 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 TNNC1P63316 161 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 CTDSPL2Q05D32 466 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 CALCOCO2Q13137 446 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 KRT222Q8N1A0 295 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 CEP63Q96MT8 703 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 NSRP1Q9H0G5 558 aaKnown RBP16.66■□□□□ 0.26
SNPH-202ENST00000381873 ARID4AP29374 1257 aaPredicted RBP16.66■□□□□ 0.26
SNPH-202ENST00000381873 KRT40Q6A162 431 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 GIMAP7Q8NHV1 300 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 BAG1Q99933 345 aaPredicted RBP16.66■□□□□ 0.26
SNPH-202ENST00000381873 VPS16Q9H269 839 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 PRDM10Q9NQV6 1147 aa16.66■□□□□ 0.26
SNPH-202ENST00000381873 TRPC5Q9UL62 973 aaPredicted RBP16.66■□□□□ 0.26
SNPH-202ENST00000381873 GTF2IP78347 998 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 MFSD14BQ5SR56 506 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 ATRIPQ8WXE1 791 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 KRT5P13647 590 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 STRN3Q13033 797 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 ABCA6Q8N139 1617 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 CFBP00751 764 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 PRKG1Q13976 671 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 NCAPH2Q6IBW4 605 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 PHKBQ93100 1093 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 DNM3Q9UQ16 869 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 MAPK8IP1Q9UQF2 711 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 USP31Q70CQ4 1352 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 NDC80O14777 642 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 MRPS9P82933 396 aaKnown RBP16.65■□□□□ 0.26
SNPH-202ENST00000381873 IGSF22Q8N9C0 903 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 MLKLQ8NB16 471 aa16.65■□□□□ 0.26
SNPH-202ENST00000381873 H7C1D1 291 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 TNFAIP3P21580 790 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 TRPC3Q13507 836 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 TEKT1Q969V4 418 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNPH-202ENST00000381873 SPATA31A3Q5VYP0 1347 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 ATP2A2P16615 1042 aaKnown RBP16.64■□□□□ 0.25
SNPH-202ENST00000381873 CTSWP56202 376 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 TTC14Q96N46 770 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 DSCC1Q9BVC3 393 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 AZI2Q9H6S1 392 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 TTF2Q9UNY4 1162 aaKnown RBP16.64■□□□□ 0.25
SNPH-202ENST00000381873 HS1BP3Q53T59 392 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 CTNND2Q9UQB3 1225 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 USP17L12C9JPN9 530 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 USP17L21D6R901 530 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 PPP1R7Q15435 360 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 CCDC63Q8NA47 563 aa16.64■□□□□ 0.25
SNPH-202ENST00000381873 TRIM14Q14142 442 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 REXO1Q8N1G1 1221 aaKnown RBP16.63■□□□□ 0.25
SNPH-202ENST00000381873 ARFGAP2Q8N6H7 521 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 USP44Q9H0E7 712 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 USP40Q9NVE5 1235 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 FAM169AQ9Y6X4 670 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 CLTCQ00610 1675 aaKnown RBP16.63■□□□□ 0.25
SNPH-202ENST00000381873 TLDC2A0PJX2 215 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 SPOPO43791 374 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 JAKMIP2Q96AA8 810 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 ZBTB16Q05516 673 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 SYT10Q6XYQ8 523 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 CHURC1Q8WUH1 139 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 TM6SF1Q9BZW5 370 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 TSGA10Q9BZW7 698 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 ARPP21Q9UBL0 812 aaPredicted RBP16.63■□□□□ 0.25
SNPH-202ENST00000381873 CALUO43852 315 aaPredicted RBP16.63■□□□□ 0.25
SNPH-202ENST00000381873 INF2Q27J81 1249 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 NOX5Q96PH1 765 aa16.63■□□□□ 0.25
SNPH-202ENST00000381873 MAK16Q9BXY0 300 aaKnown RBP16.63■□□□□ 0.25
SNPH-202ENST00000381873 IRX3P78415 501 aaPredicted RBP16.62■□□□□ 0.25
SNPH-202ENST00000381873 USH1GQ495M9 461 aa16.62■□□□□ 0.25
SNPH-202ENST00000381873 CCDC14Q49A88 953 aa16.62■□□□□ 0.25
SNPH-202ENST00000381873 SEL1L2Q5TEA6 688 aa16.62■□□□□ 0.25
SNPH-202ENST00000381873 IFT81Q8WYA0 676 aa16.62■□□□□ 0.25
SNPH-202ENST00000381873 CCDC25Q86WR0 208 aa16.62■□□□□ 0.25
SNPH-202ENST00000381873 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNPH-202ENST00000381873 V9GYY5 206 aaPredicted RBP16.62■□□□□ 0.25
SNPH-202ENST00000381873 SSH3Q8TE77 659 aa16.62■□□□□ 0.25
SNPH-202ENST00000381873 TRIM6Q9C030 488 aaPredicted RBP16.62■□□□□ 0.25
SNPH-202ENST00000381873 ATP2C2O75185 946 aa16.61■□□□□ 0.25
SNPH-202ENST00000381873 RAB3IL1Q8TBN0 382 aa16.61■□□□□ 0.25
SNPH-202ENST00000381873 CSRNP2Q9H175 543 aa16.61■□□□□ 0.25
SNPH-202ENST00000381873 E7EWF7 191 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms