RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 PPATQ06203 517 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 SNAPC2Q13487 334 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 BMP2KLQ5H9B9 411 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 VPS53Q5VIR6 699 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 TTC6Q86TZ1 520 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 EHD4Q9H223 541 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 USP17L12C9JPN9 530 aa19.34■□□□□ 0.69
SNRPB-201ENST00000381342 USP17L21D6R901 530 aa19.34■□□□□ 0.69
SNRPB-201ENST00000381342 IGF2BP3O00425 579 aaKnown RBP eCLIP19.34■□□□□ 0.69
SNRPB-201ENST00000381342 PPIL2Q13356 520 aa19.34■□□□□ 0.69
SNRPB-201ENST00000381342 PKN2Q16513 984 aaKnown RBP19.34■□□□□ 0.69
SNRPB-201ENST00000381342 CTR9Q6PD62 1173 aa19.34■□□□□ 0.69
SNRPB-201ENST00000381342 METTL16Q86W50 562 aaKnown RBP19.34■□□□□ 0.69
SNRPB-201ENST00000381342 CNKSR2Q8WXI2 1034 aa19.34■□□□□ 0.69
SNRPB-201ENST00000381342 IL25Q9H293 177 aa19.34■□□□□ 0.69
SNRPB-201ENST00000381342 ARPP21Q9UBL0 812 aaPredicted RBP19.34■□□□□ 0.69
SNRPB-201ENST00000381342 SERPINB13Q9UIV8 391 aa19.34■□□□□ 0.69
SNRPB-201ENST00000381342 PATL2C9JE40 543 aaKnown RBP19.33■□□□□ 0.68
SNRPB-201ENST00000381342 CHMLP26374 656 aa19.33■□□□□ 0.68
SNRPB-201ENST00000381342 RRP1BQ14684 758 aaKnown RBP19.33■□□□□ 0.68
SNRPB-201ENST00000381342 NOL9Q5SY16 702 aaKnown RBP19.33■□□□□ 0.68
SNRPB-201ENST00000381342 GIMAP6Q6P9H5 292 aa19.33■□□□□ 0.68
SNRPB-201ENST00000381342 AMOTL1Q8IY63 956 aa19.33■□□□□ 0.68
SNRPB-201ENST00000381342 IFNL3Q8IZI9 196 aa19.33■□□□□ 0.68
SNRPB-201ENST00000381342 ZFYVE28Q9HCC9 887 aa19.33■□□□□ 0.68
SNRPB-201ENST00000381342 PICK1Q9NRD5 415 aa19.33■□□□□ 0.68
SNRPB-201ENST00000381342 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.33■□□□□ 0.68
SNRPB-201ENST00000381342 PTPRFP10586 1907 aa19.32■□□□□ 0.68
SNRPB-201ENST00000381342 TAF1CQ15572 869 aaPredicted RBP19.32■□□□□ 0.68
SNRPB-201ENST00000381342 C12orf60Q5U649 245 aa19.32■□□□□ 0.68
SNRPB-201ENST00000381342 FOXP4Q8IVH2 680 aaPredicted RBP19.32■□□□□ 0.68
SNRPB-201ENST00000381342 SLC44A5Q8NCS7 719 aa19.32■□□□□ 0.68
SNRPB-201ENST00000381342 DYNLL2Q96FJ2 89 aa19.32■□□□□ 0.68
SNRPB-201ENST00000381342 MS4A4AQ96JQ5 239 aa19.32■□□□□ 0.68
SNRPB-201ENST00000381342 NACAP1Q9BZK3 213 aa19.32■□□□□ 0.68
SNRPB-201ENST00000381342 NAPBQ9H115 298 aa19.32■□□□□ 0.68
SNRPB-201ENST00000381342 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
SNRPB-201ENST00000381342 RAD50Q92878 1312 aa19.31■□□□□ 0.68
SNRPB-201ENST00000381342 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
SNRPB-201ENST00000381342 GABPAQ06546 454 aa19.31■□□□□ 0.68
SNRPB-201ENST00000381342 SHROOM1Q2M3G4 852 aaPredicted RBP19.31■□□□□ 0.68
SNRPB-201ENST00000381342 SCYL3Q8IZE3 742 aa19.31■□□□□ 0.68
SNRPB-201ENST00000381342 BRI3BPQ8WY22 251 aa19.31■□□□□ 0.68
SNRPB-201ENST00000381342 MINDY4BA8MYZ0 360 aa19.3■□□□□ 0.68
SNRPB-201ENST00000381342 IRF6O14896 467 aa19.3■□□□□ 0.68
SNRPB-201ENST00000381342 CTNND1O60716 968 aaKnown RBP19.3■□□□□ 0.68
SNRPB-201ENST00000381342 GDF11O95390 407 aa19.3■□□□□ 0.68
SNRPB-201ENST00000381342 HSPD1P10809 573 aaKnown RBP19.3■□□□□ 0.68
SNRPB-201ENST00000381342 SHMT1P34896 483 aa19.3■□□□□ 0.68
SNRPB-201ENST00000381342 ARHGEF6Q15052 776 aa19.3■□□□□ 0.68
SNRPB-201ENST00000381342 SBK1Q52WX2 424 aa19.3■□□□□ 0.68
SNRPB-201ENST00000381342 ERO1AQ96HE7 468 aa19.3■□□□□ 0.68
SNRPB-201ENST00000381342 PTPN18Q99952 460 aa19.3■□□□□ 0.68
SNRPB-201ENST00000381342 CAP2P40123 477 aa19.29■□□□□ 0.68
SNRPB-201ENST00000381342 JAG1P78504 1218 aa19.29■□□□□ 0.68
SNRPB-201ENST00000381342 CRHR2Q13324 411 aa19.29■□□□□ 0.68
SNRPB-201ENST00000381342 CCDC84Q86UT8 332 aaPredicted RBP19.29■□□□□ 0.68
SNRPB-201ENST00000381342 STK11IPQ8N1F8 1099 aa19.29■□□□□ 0.68
SNRPB-201ENST00000381342 RUFY2Q8WXA3 655 aa19.29■□□□□ 0.68
SNRPB-201ENST00000381342 R3HDMLQ9H3Y0 253 aa19.29■□□□□ 0.68
SNRPB-201ENST00000381342 GREB1LQ9C091 1923 aaPredicted RBP19.28■□□□□ 0.68
SNRPB-201ENST00000381342 CXCL11O14625 94 aa19.28■□□□□ 0.68
SNRPB-201ENST00000381342 SP3Q02447 781 aa19.28■□□□□ 0.68
SNRPB-201ENST00000381342 TATDN1Q6P1N9 297 aa19.28■□□□□ 0.68
SNRPB-201ENST00000381342 C16orf86Q6ZW13 317 aa19.28■□□□□ 0.68
SNRPB-201ENST00000381342 ZCCHC17Q9NP64 241 aaKnown RBP19.28■□□□□ 0.68
SNRPB-201ENST00000381342 PTPRAP18433 802 aa19.27■□□□□ 0.68
SNRPB-201ENST00000381342 SWAP70Q9UH65 585 aa19.27■□□□□ 0.68
SNRPB-201ENST00000381342 ZBTB21Q9ULJ3 1066 aa19.27■□□□□ 0.68
SNRPB-201ENST00000381342 ZHX2Q9Y6X8 837 aa19.27■□□□□ 0.68
SNRPB-201ENST00000381342 LOC285556D6RIA3 1793 aa19.27■□□□□ 0.67
SNRPB-201ENST00000381342 ZMYM6O95789 1325 aa19.26■□□□□ 0.67
SNRPB-201ENST00000381342 BTBD19C9JJ37 291 aa19.26■□□□□ 0.67
SNRPB-201ENST00000381342 SGSM2O43147 1006 aa19.26■□□□□ 0.67
SNRPB-201ENST00000381342 CDK8P49336 464 aa19.26■□□□□ 0.67
SNRPB-201ENST00000381342 PPARAQ07869 468 aa19.26■□□□□ 0.67
SNRPB-201ENST00000381342 ALX1Q15699 326 aa19.26■□□□□ 0.67
SNRPB-201ENST00000381342 CERKLQ49MI3 558 aaPredicted RBP19.26■□□□□ 0.67
SNRPB-201ENST00000381342 FASTKD5Q7L8L6 764 aaKnown RBP19.26■□□□□ 0.67
SNRPB-201ENST00000381342 FAM43AQ8N2R8 423 aa19.26■□□□□ 0.67
SNRPB-201ENST00000381342 KCNH4Q9UQ05 1017 aa19.26■□□□□ 0.67
SNRPB-201ENST00000381342 TRIM17Q9Y577 477 aa19.26■□□□□ 0.67
SNRPB-201ENST00000381342 CDC45O75419 566 aa19.25■□□□□ 0.67
SNRPB-201ENST00000381342 GH2P01242 217 aa19.25■□□□□ 0.67
SNRPB-201ENST00000381342 FGAP02671 866 aa19.25■□□□□ 0.67
SNRPB-201ENST00000381342 KIF22Q14807 665 aa19.25■□□□□ 0.67
SNRPB-201ENST00000381342 FBXO46Q6PJ61 603 aaPredicted RBP19.25■□□□□ 0.67
SNRPB-201ENST00000381342 ASNSP08243 561 aa19.24■□□□□ 0.67
SNRPB-201ENST00000381342 CTDSPL2Q05D32 466 aa19.24■□□□□ 0.67
SNRPB-201ENST00000381342 ABCB5Q2M3G0 1257 aa19.24■□□□□ 0.67
SNRPB-201ENST00000381342 ANKRD23Q86SG2 305 aa19.24■□□□□ 0.67
SNRPB-201ENST00000381342 ESYT1Q9BSJ8 1104 aa19.24■□□□□ 0.67
SNRPB-201ENST00000381342 DSCC1Q9BVC3 393 aa19.24■□□□□ 0.67
SNRPB-201ENST00000381342 EFCC1Q9HA90 598 aa19.24■□□□□ 0.67
SNRPB-201ENST00000381342 TAOK2Q9UL54 1235 aa19.24■□□□□ 0.67
SNRPB-201ENST00000381342 MPHOSPH10O00566 681 aaKnown RBP19.23■□□□□ 0.67
SNRPB-201ENST00000381342 PRDM1O75626 825 aa19.23■□□□□ 0.67
SNRPB-201ENST00000381342 AKR1B1P15121 316 aa19.23■□□□□ 0.67
SNRPB-201ENST00000381342 HAND2P61296 217 aa19.23■□□□□ 0.67
SNRPB-201ENST00000381342 PTH1RQ03431 593 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms