RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 PTPN18Q99952 460 aa9.39□□□□□ -0.91
FAM49A-201ENST00000381323 PIH1D3Q9NQM4 214 aaKnown RBP9.39□□□□□ -0.91
FAM49A-201ENST00000381323 ECHDC1Q9NTX5 307 aa9.39□□□□□ -0.91
FAM49A-201ENST00000381323 SPEF2Q9C093 1822 aa9.39□□□□□ -0.91
FAM49A-201ENST00000381323 TMED8Q6PL24 325 aaPredicted RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 PROCA1Q8NCQ7 364 aaPredicted RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 ARMT1Q9H993 441 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 DDX4Q9NQI0 724 aaKnown RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 GINM1Q9NU53 330 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 PDE6AP16499 860 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 ZKSCAN1P17029 563 aaPredicted RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 NOL9Q5SY16 702 aaKnown RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 MFSD14CQ5VZR4 134 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 NOP58Q9Y2X3 529 aaKnown RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 FLT1P17948 1338 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 POLA2Q14181 598 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L15C9J2P7 530 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L13C9JLJ4 530 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L11C9JVI0 530 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L18D6R9N7 530 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L22D6RA61 530 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L17D6RBQ6 530 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L19D6RCP7 530 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L20D6RJB6 530 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 FARP2O94887 1054 aaPredicted RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L24Q0WX57 530 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 NOL8Q76FK4 1167 aaKnown RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 TLR7Q9NYK1 1049 aaKnown RBP9.38□□□□□ -0.91
FAM49A-201ENST00000381323 ZBTB21Q9ULJ3 1066 aa9.38□□□□□ -0.91
FAM49A-201ENST00000381323 IRS2Q9Y4H2 1338 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 FLOT1O75955 427 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 NCAPG2Q86XI2 1143 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 NAPBQ9H115 298 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 HMX1Q9NP08 348 aaPredicted RBP9.37□□□□□ -0.91
FAM49A-201ENST00000381323 SMARCA5O60264 1052 aaPredicted RBP9.37□□□□□ -0.91
FAM49A-201ENST00000381323 BACE1P56817 501 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 PRKCZQ05513 592 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 RWDD1Q9H446 243 aaPredicted RBP9.37□□□□□ -0.91
FAM49A-201ENST00000381323 EVI5O60447 810 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 ICA1Q05084 483 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 B4GALNT3Q6L9W6 998 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 DEFB118Q96PH6 123 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 SDR42E1Q8WUS8 393 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 RILPL2Q969X0 211 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 SWAP70Q9UH65 585 aa9.37□□□□□ -0.91
FAM49A-201ENST00000381323 AKAP11Q9UKA4 1901 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 TBC1D12O60347 775 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 ELNP15502 786 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 PPP4CP60510 307 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 PDE4BQ07343 736 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 ASCC2Q9H1I8 757 aaPredicted RBP9.36□□□□□ -0.91
FAM49A-201ENST00000381323 TESPA1A2RU30 521 aaPredicted RBP9.36□□□□□ -0.91
FAM49A-201ENST00000381323 ZFYP08048 801 aaPredicted RBP9.36□□□□□ -0.91
FAM49A-201ENST00000381323 EN2P19622 333 aaPredicted RBP9.36□□□□□ -0.91
FAM49A-201ENST00000381323 MAPK4P31152 587 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 RGS2P41220 211 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 RRP12Q5JTH9 1297 aaKnown RBP9.36□□□□□ -0.91
FAM49A-201ENST00000381323 CHMP4CQ96CF2 233 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 DDX11Q96FC9 970 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 CCDC17Q96LX7 622 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 ARHGAP39Q9C0H5 1083 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 ANTXR1Q9H6X2 564 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 GOPCQ9HD26 462 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 HOXC10Q9NYD6 342 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 A0A0G2JLL6 359 aaPredicted RBP9.36□□□□□ -0.91
FAM49A-201ENST00000381323 DHX16O60231 1041 aaKnown RBP9.36□□□□□ -0.91
FAM49A-201ENST00000381323 FAM110CQ1W6H9 321 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 PRRT2Q7Z6L0 340 aaPredicted RBP9.36□□□□□ -0.91
FAM49A-201ENST00000381323 CFHR5Q9BXR6 569 aa9.36□□□□□ -0.91
FAM49A-201ENST00000381323 NPM3O75607 178 aaKnown RBP9.35□□□□□ -0.91
FAM49A-201ENST00000381323 CCL5P13501 91 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 ZNF112Q9UJU3 913 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 RHBDL3P58872 404 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 SOCS4Q8WXH5 440 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 ATP8A2Q9NTI2 1148 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 AFG3L2Q9Y4W6 797 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 NECAB2Q7Z6G3 386 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 LBHD1Q9BQE6 289 aaPredicted RBP9.35□□□□□ -0.91
FAM49A-201ENST00000381323 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.35□□□□□ -0.91
FAM49A-201ENST00000381323 COL4A1P02462 1669 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L12C9JPN9 530 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 USP17L21D6R901 530 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 INHAP05111 366 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 HERVK_113P62684 666 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 KCTD2Q14681 263 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 PLEKHH3Q7Z736 793 aa9.35□□□□□ -0.91
FAM49A-201ENST00000381323 ADAMTSL1Q8N6G6 1762 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 GNAT2P19087 354 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 C17orf99Q6UX52 265 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 TMEM179Q6ZVK1 233 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 SPICE1Q8N0Z3 855 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 ZNF512BQ96KM6 892 aaPredicted RBP9.34□□□□□ -0.91
FAM49A-201ENST00000381323 TSPY3P0CV98 308 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 TSPY8P0CW00 308 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 ANP32AP39687 249 aaKnown RBP9.34□□□□□ -0.91
FAM49A-201ENST00000381323 SEPT2Q15019 361 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms