RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 CAPRIN2Q6IMN6 1127 aaKnown RBP7.42□□□□□ -1.22
RIPK1-202ENST00000380409 TAX1BP1Q86VP1 789 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 MYLK4Q86YV6 388 aaPredicted RBP7.42□□□□□ -1.22
RIPK1-202ENST00000380409 SDR16C5Q8N3Y7 309 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 C8orf58Q8NAV2 365 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 RBM41Q96IZ5 413 aaKnown RBP7.42□□□□□ -1.22
RIPK1-202ENST00000380409 L3MBTL3Q96JM7 780 aaPredicted RBP7.42□□□□□ -1.22
RIPK1-202ENST00000380409 FMNL2Q96PY5 1086 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 CAPS2Q9BXY5 557 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 C14orf93Q9H972 538 aaKnown RBP7.42□□□□□ -1.22
RIPK1-202ENST00000380409 KCNMB3Q9NPA1 279 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 PIK3C2BO00750 1634 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 ROBO2Q9HCK4 1378 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 IKBKBO14920 756 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 NBPF7P0C2Y1 421 aaPredicted RBP7.42□□□□□ -1.22
RIPK1-202ENST00000380409 FERP16591 822 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 CCNG1P51959 295 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 RESTQ13127 1097 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 HSP90B2PQ58FF3 399 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 ZNF530Q6P9A1 599 aaPredicted RBP7.42□□□□□ -1.22
RIPK1-202ENST00000380409 ILDR2Q71H61 639 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 RASEFQ8IZ41 740 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 KLHDC4Q8TBB5 520 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 RUFY2Q8WXA3 655 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 CCDC102AQ96A19 550 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 LRRCC1Q9C099 1032 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 TSPYL2Q9H2G4 693 aaPredicted RBP7.42□□□□□ -1.22
RIPK1-202ENST00000380409 MBIPQ9NS73 344 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 INTS13Q9NVM9 706 aa7.42□□□□□ -1.22
RIPK1-202ENST00000380409 SBNO1A3KN83 1393 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 GGCXP38435 758 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 MAGEA10P43363 369 aaPredicted RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 PAPOLAP51003 745 aaKnown RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 EVA1CP58658 441 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 SLC30A9Q6PML9 568 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 TOGARAM2Q6ZUX3 1019 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 BRINP3Q76B58 766 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 ARHGAP22Q7Z5H3 698 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 VSTM4Q8IW00 320 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 GORASP1Q9BQQ3 440 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 SH2B1Q9NRF2 756 aaPredicted RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 C15orf41Q9Y2V0 281 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 ANKARQ7Z5J8 1434 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 RBM47A0AV96 593 aaKnown RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 EZRP15311 586 aaKnown RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 ABL2P42684 1182 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 MYBPC3Q14896 1274 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 NAA35Q5VZE5 725 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 FAM76AQ8TAV0 307 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 RIN2Q8WYP3 895 aaPredicted RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 ACTR5Q9H9F9 607 aaPredicted RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 MRPL44Q9H9J2 332 aaKnown RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 ANO10Q9NW15 660 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 SLC5A4Q9NY91 659 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 IFNKQ9P0W0 207 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 PES1O00541 588 aaKnown RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 MAP3K13O43283 966 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 RPL13P26373 211 aaKnown RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 DEUP1Q05D60 604 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 IFFO1Q0D2I5 559 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 SFSWAPQ12872 951 aaKnown RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 USP4Q13107 963 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 RIPK1Q13546 671 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 WASHC4Q2M389 1173 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 CCAR1Q8IX12 1150 aaKnown RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 PROCA1Q8NCQ7 364 aaPredicted RBP7.41□□□□□ -1.22
RIPK1-202ENST00000380409 IFT43Q96FT9 208 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 MEIS3Q99687 375 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 MYO6Q9UM54 1294 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 PHF24Q9UPV7 400 aa7.41□□□□□ -1.22
RIPK1-202ENST00000380409 SHTN1A0MZ66 631 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 TARSL2A2RTX5 802 aaKnown RBP7.4□□□□□ -1.22
RIPK1-202ENST00000380409 A6NNZ2 444 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 DNAJC8O75937 253 aaPredicted RBP7.4□□□□□ -1.22
RIPK1-202ENST00000380409 SLMAPQ14BN4 828 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 NAA25Q14CX7 972 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 TUBB8Q3ZCM7 444 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 TMCO4Q5TGY1 634 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
RIPK1-202ENST00000380409 SPATA32Q96LK8 384 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 JCADQ9P266 1359 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 EP400Q96L91 3159 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 TESPA1A2RU30 521 aaPredicted RBP7.4□□□□□ -1.22
RIPK1-202ENST00000380409 MARCH6O60337 910 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 FECHP22830 423 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 PEX19P40855 299 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 PABPC4Q13310 644 aaKnown RBP eCLIP7.4□□□□□ -1.22
RIPK1-202ENST00000380409 BYSLQ13895 437 aaKnown RBP7.4□□□□□ -1.22
RIPK1-202ENST00000380409 FAM173BQ6P4H8 233 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 CCDC170Q8IYT3 715 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 CCDC47Q96A33 483 aaKnown RBP7.4□□□□□ -1.22
RIPK1-202ENST00000380409 TM6SF1Q9BZW5 370 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 ALDH8A1Q9H2A2 487 aaPredicted RBP7.4□□□□□ -1.22
RIPK1-202ENST00000380409 SAMM50Q9Y512 469 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 NUB1Q9Y5A7 615 aa7.4□□□□□ -1.22
RIPK1-202ENST00000380409 NEXMIFQ5QGS0 1516 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 NRKQ7Z2Y5 1582 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 DNM1LO00429 736 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 DDX58O95786 925 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms