RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 DAGLAQ9Y4D2 1042 aa23.07■■□□□ 1.28
PDLIM5-205ENST00000380180 LIG1P18858 919 aa23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 TROAPQ12815 778 aa23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 TRIM22Q8IYM9 498 aa23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 SCN9AQ15858 1988 aa23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 LETM1O95202 739 aaPredicted RBP23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 GUCY1A2P33402 732 aa23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 TFAP4Q01664 338 aa23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 WASF1Q92558 559 aa23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 DBNDD1Q9H9R9 158 aa23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 MKNK2Q9HBH9 465 aa23.06■■□□□ 1.28
PDLIM5-205ENST00000380180 FLT1P17948 1338 aa23.05■■□□□ 1.28
PDLIM5-205ENST00000380180 TRIM29Q14134 588 aa23.05■■□□□ 1.28
PDLIM5-205ENST00000380180 PODNQ7Z5L7 613 aa23.05■■□□□ 1.28
PDLIM5-205ENST00000380180 TTF2Q9UNY4 1162 aaKnown RBP23.05■■□□□ 1.28
PDLIM5-205ENST00000380180 BAZ2BQ9UIF8 2168 aaKnown RBP23.05■■□□□ 1.28
PDLIM5-205ENST00000380180 CALM1P0DP23 149 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 CALM2P0DP24 149 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 CALM3P0DP25 149 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 MYSM1Q5VVJ2 828 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 C7orf43Q8WVR3 580 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 ADAMTSL1Q8N6G6 1762 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 NT5C2P49902 561 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 RCSD1Q6JBY9 416 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 KCNQ5Q9NR82 932 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 RTEL1Q9NZ71 1219 aa23.04■■□□□ 1.28
PDLIM5-205ENST00000380180 DDAH1O94760 285 aa23.03■■□□□ 1.28
PDLIM5-205ENST00000380180 DEXIO95424 95 aa23.03■■□□□ 1.28
PDLIM5-205ENST00000380180 NASPP49321 788 aaPredicted RBP23.03■■□□□ 1.28
PDLIM5-205ENST00000380180 SLC44A5Q8NCS7 719 aa23.03■■□□□ 1.28
PDLIM5-205ENST00000380180 IL17RBQ9NRM6 502 aa23.03■■□□□ 1.28
PDLIM5-205ENST00000380180 BICD2Q8TD16 824 aa23.03■■□□□ 1.28
PDLIM5-205ENST00000380180 TSPY26PQ9H489 355 aa23.03■■□□□ 1.28
PDLIM5-205ENST00000380180 RBM28Q9NW13 759 aaKnown RBP23.03■■□□□ 1.28
PDLIM5-205ENST00000380180 ZNF444Q8N0Y2 327 aaPredicted RBP23.02■■□□□ 1.28
PDLIM5-205ENST00000380180 CLIC4Q9Y696 253 aa23.02■■□□□ 1.28
PDLIM5-205ENST00000380180 ZNF646O15015 1829 aaPredicted RBP23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 SCNN1DP51172 638 aa23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 FUT2Q10981 343 aa23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 RNF26Q9BY78 433 aaPredicted RBP23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 DACT1Q9NYF0 836 aa23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 MYH8P13535 1937 aa23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 PLEKHA8P1O95397 391 aa23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 U2AF2P26368 475 aaKnown RBP eCLIP23.01■■□□□ 1.272e-9■■■■■ 29.5
PDLIM5-205ENST00000380180 GNL2Q13823 731 aaKnown RBP23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 DGKHQ86XP1 1220 aa23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 POLR3EQ9NVU0 708 aa23.01■■□□□ 1.27
PDLIM5-205ENST00000380180 TSPY3P0CV98 308 aa23■■□□□ 1.27
PDLIM5-205ENST00000380180 TSPY8P0CW00 308 aa23■■□□□ 1.27
PDLIM5-205ENST00000380180 CDK8P49336 464 aa23■■□□□ 1.27
PDLIM5-205ENST00000380180 C16orf86Q6ZW13 317 aa23■■□□□ 1.27
PDLIM5-205ENST00000380180 LINC00301Q8NCQ3 95 aa23■■□□□ 1.27
PDLIM5-205ENST00000380180 ZNF287Q9HBT7 754 aa23■■□□□ 1.27
PDLIM5-205ENST00000380180 USP17L3A6NCW0 530 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 USP17L4A6NCW7 530 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 ECE2O60344 883 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 RASA1P20936 1047 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 ME1P48163 572 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 USP17L1Q7RTZ2 530 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 NR1I2O75469 434 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 MMP1P03956 469 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 HHIPL2Q6UWX4 724 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 CTCFLQ8NI51 663 aaPredicted RBP22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 ANKS1AQ92625 1134 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 TCP11L1Q9NUJ3 509 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 KCNJ14Q9UNX9 436 aa22.99■■□□□ 1.27
PDLIM5-205ENST00000380180 PRPF3O43395 683 aaKnown RBP22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 AKAP17AQ02040 695 aaKnown RBP22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 PICALMQ13492 652 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 STRIP1Q5VSL9 837 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 TMTC3Q6ZXV5 915 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 TEKT1Q969V4 418 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 NUP62CLQ9H1M0 184 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 KAT14Q9H8E8 782 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 SNED1Q8TER0 1413 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 YEATS4O95619 227 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 STK38Q15208 465 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 PKN1Q16512 942 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 CAMK4Q16566 473 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 AOC3Q16853 763 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 CCDC178Q5BJE1 867 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 CC2D2BQ6DHV5 1058 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 CCAR1Q8IX12 1150 aaKnown RBP22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 DDX19AQ9NUU7 478 aaKnown RBP22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 USP40Q9NVE5 1235 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 PCDHA7Q9UN72 937 aa22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 V9GY48 417 aaPredicted RBP22.98■■□□□ 1.27
PDLIM5-205ENST00000380180 C10orf71Q711Q0 1435 aa22.97■■□□□ 1.27
PDLIM5-205ENST00000380180 C21orf2O43822 256 aa22.97■■□□□ 1.27
PDLIM5-205ENST00000380180 ANO1Q5XXA6 986 aa22.97■■□□□ 1.27
PDLIM5-205ENST00000380180 hCG_1642624A0A1W2PR95 340 aa22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 BTBD18B2RXH4 712 aa22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 WDHD1O75717 1129 aaPredicted RBP22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 SAFBQ15424 915 aaKnown RBP eCLIP22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 DACT2Q5SW24 774 aa22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 KLHL34Q8N239 644 aa22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 SRBD1Q8N5C6 995 aaKnown RBP22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 DDX4Q9NQI0 724 aaKnown RBP22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 SPTLC2O15270 562 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms