RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 CALM2P0DP24 149 aa17.45■□□□□ 0.38
SNX2-201ENST00000379516 CALM3P0DP25 149 aa17.45■□□□□ 0.38
SNX2-201ENST00000379516 TROAPQ12815 778 aa17.45■□□□□ 0.38
SNX2-201ENST00000379516 DCAF8Q5TAQ9 597 aa17.45■□□□□ 0.38
SNX2-201ENST00000379516 FUCA2Q9BTY2 467 aa17.45■□□□□ 0.38
SNX2-201ENST00000379516 CLSTN2Q9H4D0 955 aa17.45■□□□□ 0.38
SNX2-201ENST00000379516 PLCD1P51178 756 aa17.44■□□□□ 0.38
SNX2-201ENST00000379516 TFAP4Q01664 338 aa17.44■□□□□ 0.38
SNX2-201ENST00000379516 AKAP17AQ02040 695 aaKnown RBP17.44■□□□□ 0.38
SNX2-201ENST00000379516 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
SNX2-201ENST00000379516 RBM28Q9NW13 759 aaKnown RBP17.44■□□□□ 0.38
SNX2-201ENST00000379516 MYH2Q9UKX2 1941 aa17.44■□□□□ 0.38
SNX2-201ENST00000379516 PCDHA7Q9UN72 937 aa17.44■□□□□ 0.38
SNX2-201ENST00000379516 GAKO14976 1311 aa17.44■□□□□ 0.38
SNX2-201ENST00000379516 DDAH1O94760 285 aa17.44■□□□□ 0.38
SNX2-201ENST00000379516 YEATS4O95619 227 aa17.44■□□□□ 0.38
SNX2-201ENST00000379516 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNX2-201ENST00000379516 PPP1R9BQ96SB3 815 aa17.44■□□□□ 0.38
SNX2-201ENST00000379516 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNX2-201ENST00000379516 RNF26Q9BY78 433 aaPredicted RBP17.44■□□□□ 0.38
SNX2-201ENST00000379516 ROBO3Q96MS0 1386 aa17.43■□□□□ 0.38
SNX2-201ENST00000379516 F8W031 263 aaPredicted RBP17.43■□□□□ 0.38
SNX2-201ENST00000379516 SPTLC2O15270 562 aa17.43■□□□□ 0.38
SNX2-201ENST00000379516 CCDC192P0DO97 292 aa17.43■□□□□ 0.38
SNX2-201ENST00000379516 SAFBQ15424 915 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNX2-201ENST00000379516 ANO1Q5XXA6 986 aa17.43■□□□□ 0.38
SNX2-201ENST00000379516 CKAP2LQ8IYA6 745 aa17.43■□□□□ 0.38
SNX2-201ENST00000379516 EYA3Q99504 573 aa17.43■□□□□ 0.38
SNX2-201ENST00000379516 GOLPH3LQ9H4A5 285 aa17.43■□□□□ 0.38
SNX2-201ENST00000379516 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
SNX2-201ENST00000379516 COL11A2P13942 1736 aaPredicted RBP17.43■□□□□ 0.38
SNX2-201ENST00000379516 RGPD3A6NKT7 1758 aaPredicted RBP17.42■□□□□ 0.38
SNX2-201ENST00000379516 RGPD4Q7Z3J3 1758 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 PLEKHA8P1O95397 391 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 MMP1P03956 469 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 RHBDL3P58872 404 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 STYK1Q6J9G0 422 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 CCDC73Q6ZRK6 1079 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 ZNF444Q8N0Y2 327 aaPredicted RBP17.42■□□□□ 0.38
SNX2-201ENST00000379516 SUGT1Q9Y2Z0 365 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 FLT1P17948 1338 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 NT5C2P49902 561 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 ADALQ6DHV7 355 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 FSIP1Q8NA03 581 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 SLC44A5Q8NCS7 719 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 CTCFLQ8NI51 663 aaPredicted RBP17.42■□□□□ 0.38
SNX2-201ENST00000379516 TRIM44Q96DX7 344 aaPredicted RBP17.42■□□□□ 0.38
SNX2-201ENST00000379516 DAGLAQ9Y4D2 1042 aa17.42■□□□□ 0.38
SNX2-201ENST00000379516 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 CHRNA5P30532 468 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 DIS3L2Q8IYB7 885 aaKnown RBP17.41■□□□□ 0.38
SNX2-201ENST00000379516 CERS5Q8N5B7 392 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 MXD3Q9BW11 206 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 IL17RBQ9NRM6 502 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
SNX2-201ENST00000379516 FUT2Q10981 343 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 RCSD1Q6JBY9 416 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 MRPS27Q92552 414 aaKnown RBP17.41■□□□□ 0.38
SNX2-201ENST00000379516 KAT14Q9H8E8 782 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 ZNF287Q9HBT7 754 aa17.41■□□□□ 0.38
SNX2-201ENST00000379516 TTF2Q9UNY4 1162 aaKnown RBP17.41■□□□□ 0.38
SNX2-201ENST00000379516 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
SNX2-201ENST00000379516 ECM29Q5VYK3 1845 aa17.4■□□□□ 0.38
SNX2-201ENST00000379516 hCG_1642624A0A1W2PR95 340 aa17.4■□□□□ 0.38
SNX2-201ENST00000379516 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
SNX2-201ENST00000379516 SNW1Q13573 536 aaKnown RBP17.4■□□□□ 0.38
SNX2-201ENST00000379516 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
SNX2-201ENST00000379516 DGKHQ86XP1 1220 aa17.4■□□□□ 0.38
SNX2-201ENST00000379516 NOSTRINQ8IVI9 506 aa17.4■□□□□ 0.38
SNX2-201ENST00000379516 A0A1W2PQ27 194 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 A0A1W2PQ64 194 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 A0A1W2PQD8 194 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 USP17L3A6NCW0 530 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 USP17L4A6NCW7 530 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 XBP1P17861 261 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 FAM160A1Q05DH4 1040 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 SLC39A14Q15043 492 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 PKN1Q16512 942 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 UVSSAQ2YD98 709 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 RBM43Q6ZSC3 357 aaKnown RBP17.39■□□□□ 0.38
SNX2-201ENST00000379516 USP17L1Q7RTZ2 530 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 DBNDD1Q9H9R9 158 aa17.39■□□□□ 0.38
SNX2-201ENST00000379516 DLEC1Q9Y238 1755 aa17.39■□□□□ 0.37
SNX2-201ENST00000379516 NAV1Q8NEY1 1877 aa17.39■□□□□ 0.37
SNX2-201ENST00000379516 KINO60870 393 aaKnown RBP17.39■□□□□ 0.37
SNX2-201ENST00000379516 CDK8P49336 464 aa17.39■□□□□ 0.37
SNX2-201ENST00000379516 TYRO3Q06418 890 aa17.39■□□□□ 0.37
SNX2-201ENST00000379516 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.37
SNX2-201ENST00000379516 ENGASEQ8NFI3 743 aa17.39■□□□□ 0.37
SNX2-201ENST00000379516 FOXP1Q9H334 677 aaPredicted RBP17.39■□□□□ 0.37
SNX2-201ENST00000379516 A0A1B0GVL5 298 aa17.38■□□□□ 0.37
SNX2-201ENST00000379516 RASA1P20936 1047 aa17.38■□□□□ 0.37
SNX2-201ENST00000379516 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
SNX2-201ENST00000379516 C16orf86Q6ZW13 317 aa17.38■□□□□ 0.37
SNX2-201ENST00000379516 SRBD1Q8N5C6 995 aaKnown RBP17.38■□□□□ 0.37
SNX2-201ENST00000379516 CNKSR1Q969H4 720 aa17.38■□□□□ 0.37
SNX2-201ENST00000379516 RTN4Q9NQC3 1192 aaKnown RBP17.38■□□□□ 0.37
SNX2-201ENST00000379516 VPS54Q9P1Q0 977 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms