RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 GOLGA8DPQ0D2H9 430 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 CFAP100Q494V2 611 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 GRAMD1CQ8IYS0 662 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 MARCH10Q8NA82 808 aaPredicted RBP22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 INTS13Q9NVM9 706 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 RAI14Q9P0K7 980 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 CYP2D7A0A087X1C5 515 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 MAGEB6P1A0A0J9YX57 407 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 ATP2B1P20020 1258 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 POSTNQ15063 836 aa22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 UTP14CQ5TAP6 766 aaKnown RBP22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 AEBP2Q6ZN18 517 aaPredicted RBP22.4■■□□□ 1.18
SHROOM1-202ENST00000378676 SPATA31A1Q5TZJ5 1347 aa22.39■■□□□ 1.18
SHROOM1-202ENST00000378676 POLR2DO15514 142 aaKnown RBP22.39■■□□□ 1.18
SHROOM1-202ENST00000378676 VSTM4Q8IW00 320 aa22.39■■□□□ 1.18
SHROOM1-202ENST00000378676 RIOK1Q9BRS2 568 aaKnown RBP22.39■■□□□ 1.18
SHROOM1-202ENST00000378676 CCDC196A0A1B0GTZ2 297 aa22.39■■□□□ 1.17
SHROOM1-202ENST00000378676 CBFA2T2O43439 604 aa22.39■■□□□ 1.17
SHROOM1-202ENST00000378676 RCAN1P53805 252 aa22.39■■□□□ 1.17
SHROOM1-202ENST00000378676 DYNLL1P63167 89 aaKnown RBP22.39■■□□□ 1.17
SHROOM1-202ENST00000378676 ZNF827Q17R98 1081 aa22.39■■□□□ 1.17
SHROOM1-202ENST00000378676 HSP90AA4PQ58FG1 418 aa22.39■■□□□ 1.17
SHROOM1-202ENST00000378676 USP49Q70CQ1 688 aa22.39■■□□□ 1.17
SHROOM1-202ENST00000378676 TMTC2Q8N394 836 aa22.39■■□□□ 1.17
SHROOM1-202ENST00000378676 ANAPC4Q9UJX5 808 aa22.39■■□□□ 1.17
SHROOM1-202ENST00000378676 KIF2AO00139 706 aaPredicted RBP22.38■■□□□ 1.17
SHROOM1-202ENST00000378676 ELOA2Q8IYF1 753 aaPredicted RBP22.38■■□□□ 1.17
SHROOM1-202ENST00000378676 FMR1Q06787 632 aaKnown RBP eCLIP22.38■■□□□ 1.17
SHROOM1-202ENST00000378676 ENAHQ8N8S7 591 aaPredicted RBP22.38■■□□□ 1.17
SHROOM1-202ENST00000378676 ESR2Q92731 530 aa22.38■■□□□ 1.17
SHROOM1-202ENST00000378676 hCG_1642624A0A1W2PR95 340 aa22.37■■□□□ 1.17
SHROOM1-202ENST00000378676 ERFEQ4G0M1 354 aa22.37■■□□□ 1.17
SHROOM1-202ENST00000378676 SYT10Q6XYQ8 523 aa22.37■■□□□ 1.17
SHROOM1-202ENST00000378676 PDILTQ8N807 584 aa22.37■■□□□ 1.17
SHROOM1-202ENST00000378676 ZNF384Q8TF68 577 aa22.37■■□□□ 1.17
SHROOM1-202ENST00000378676 CDC5LQ99459 802 aaKnown RBP22.37■■□□□ 1.17
SHROOM1-202ENST00000378676 CABP5Q9NP86 173 aa22.37■■□□□ 1.17
SHROOM1-202ENST00000378676 VPS54Q9P1Q0 977 aa22.37■■□□□ 1.17
SHROOM1-202ENST00000378676 CGNQ9P2M7 1197 aaKnown RBP22.37■■□□□ 1.17
SHROOM1-202ENST00000378676 PKN1Q16512 942 aa22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 EARS2Q5JPH6 523 aaKnown RBP22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 RNF26Q9BY78 433 aaPredicted RBP22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 CSRNP2Q9H175 543 aa22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 SRPRBQ9Y5M8 271 aaKnown RBP22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 NUTM2BA6NNL0 878 aaPredicted RBP22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 NUTM2EB1AL46 878 aaPredicted RBP22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 ACTN4O43707 911 aaKnown RBP22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 PRDM1O75626 825 aa22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 DHX8Q14562 1220 aaKnown RBP22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 NUTM2AQ8IVF1 878 aaPredicted RBP22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 TRMT44Q8IYL2 757 aaKnown RBP22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 ERO1AQ96HE7 468 aa22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 TMX1Q9H3N1 280 aa22.36■■□□□ 1.17
SHROOM1-202ENST00000378676 SARSP49591 514 aaKnown RBP22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 NT5DC1Q5TFE4 455 aa22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 ZNF579Q8NAF0 562 aaKnown RBP22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 BAZ2BQ9UIF8 2168 aaKnown RBP22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 NRDCO43847 1150 aa22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 SLU7O95391 586 aaKnown RBP22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 PLEKHA8P1O95397 391 aa22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 EVX2Q03828 476 aa22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 FUT2Q10981 343 aa22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 MORC3Q14149 939 aa22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 ANKRD18AQ8IVF6 992 aa22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 CDCA7Q9BWT1 371 aaPredicted RBP22.35■■□□□ 1.17
SHROOM1-202ENST00000378676 TOP1P11387 765 aaKnown RBP22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 ELF2Q15723 593 aa22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 LRRN4CLQ8ND94 238 aa22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 MED15Q96RN5 788 aa22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 ZSCAN10Q96SZ4 725 aaPredicted RBP22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 HOOK1Q9UJC3 728 aaKnown RBP22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 KIAA1551Q9HCM1 1747 aa22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 WNT7AO00755 349 aa22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 MYO1BO43795 1136 aa22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 TMEM139Q8IV31 216 aa22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 SMARCE1Q969G3 411 aa22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 L2HGDHQ9H9P8 463 aa22.34■■□□□ 1.17
SHROOM1-202ENST00000378676 A0A087X0B3 334 aa22.33■■□□□ 1.17
SHROOM1-202ENST00000378676 PHF20Q9BVI0 1012 aa22.33■■□□□ 1.17
SHROOM1-202ENST00000378676 NFE2L3Q9Y4A8 694 aa22.33■■□□□ 1.17
SHROOM1-202ENST00000378676 MAST2Q6P0Q8 1798 aa22.33■■□□□ 1.16
SHROOM1-202ENST00000378676 ZNF18P17022 549 aa22.33■■□□□ 1.16
SHROOM1-202ENST00000378676 ZSCAN20P17040 1043 aaPredicted RBP22.33■■□□□ 1.16
SHROOM1-202ENST00000378676 DMTNQ08495 405 aa22.33■■□□□ 1.16
SHROOM1-202ENST00000378676 GNL3LQ9NVN8 582 aaKnown RBP22.33■■□□□ 1.16
SHROOM1-202ENST00000378676 CEP131Q9UPN4 1083 aa22.33■■□□□ 1.16
SHROOM1-202ENST00000378676 CCDC88AQ3V6T2 1871 aa22.33■■□□□ 1.16
SHROOM1-202ENST00000378676 KCNQ2O43526 872 aa22.32■■□□□ 1.16
SHROOM1-202ENST00000378676 UBE4AQ14139 1066 aa22.32■■□□□ 1.16
SHROOM1-202ENST00000378676 NOM1Q5C9Z4 860 aaKnown RBP22.32■■□□□ 1.16
SHROOM1-202ENST00000378676 ZNF652Q9Y2D9 606 aa22.32■■□□□ 1.16
SHROOM1-202ENST00000378676 KLRK1P26718 216 aa22.32■■□□□ 1.16
SHROOM1-202ENST00000378676 KMT5BQ4FZB7 885 aa22.32■■□□□ 1.16
SHROOM1-202ENST00000378676 FEZ1Q99689 392 aa22.32■■□□□ 1.16
SHROOM1-202ENST00000378676 KRT2P35908 639 aa22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 AKAP17AQ02040 695 aaKnown RBP22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 TBX2Q13207 712 aaPredicted RBP22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 IFIT1BQ5T764 474 aaKnown RBP22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 MLKLQ8NB16 471 aa22.31■■□□□ 1.16
SHROOM1-202ENST00000378676 CELF1Q92879 486 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms