RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GJA5P36382 358 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 CDK8P49336 464 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 GTF2A2P52657 109 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 RRP1BQ14684 758 aaKnown RBP15.78■□□□□ 0.12
CKAP2-202ENST00000378034 DYNLL2Q96FJ2 89 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 CCDC17Q96LX7 622 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 DSCC1Q9BVC3 393 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 FGAP02671 866 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 TM4SF4P48230 202 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 EVX2Q03828 476 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 CABP5Q9NP86 173 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 ANAPC4Q9UJX5 808 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 KCNH4Q9UQ05 1017 aa15.78■□□□□ 0.12
CKAP2-202ENST00000378034 PHIPQ8WWQ0 1821 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 CEP350Q5VT06 3117 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 USP17L5A8MUK1 530 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 CXCL11O14625 94 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 SGSM2O43147 1006 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 PPARAQ07869 468 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 MKRN3Q13064 507 aaKnown RBP15.77■□□□□ 0.12
CKAP2-202ENST00000378034 SNAPC2Q13487 334 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 ABCB5Q2M3G0 1257 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 CASC1Q6TDU7 716 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 ZIC5Q96T25 663 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 AS3MTQ9HBK9 375 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 ZBTB21Q9ULJ3 1066 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 ZHX2Q9Y6X8 837 aa15.77■□□□□ 0.12
CKAP2-202ENST00000378034 TESPA1A2RU30 521 aaPredicted RBP15.76■□□□□ 0.11
CKAP2-202ENST00000378034 IRF6O14896 467 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 PDE4BQ07343 736 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 CTNNA3Q9UI47 895 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 AFG3L2Q9Y4W6 797 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 CDC45O75419 566 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 GDF11O95390 407 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 CETPP11597 493 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 SLC44A5Q8NCS7 719 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 MS4A4AQ96JQ5 239 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 WDR18Q9BV38 432 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 MKNK2Q9HBH9 465 aa15.76■□□□□ 0.11
CKAP2-202ENST00000378034 GH2P01242 217 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 BEGAINQ9BUH8 593 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 IL25Q9H293 177 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 WBP1LQ9NX94 342 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 SMIM22K7EJ46 135 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 CA12O43570 354 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 JAG1P78504 1218 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 OTUD7BQ6GQQ9 843 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 TMEM179Q6ZVK1 233 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 ZNF280CQ8ND82 737 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 ESYT1Q9BSJ8 1104 aa15.75■□□□□ 0.11
CKAP2-202ENST00000378034 ALDH1A1P00352 501 aa15.74■□□□□ 0.11
CKAP2-202ENST00000378034 PCP11498 1178 aaKnown RBP15.74■□□□□ 0.11
CKAP2-202ENST00000378034 CCL15-CCL14A0A0B4J2E2 113 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 MPHOSPH10O00566 681 aaKnown RBP15.73■□□□□ 0.11
CKAP2-202ENST00000378034 RASA1P20936 1047 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 CCL15Q16663 113 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 KIAA1211Q6ZU35 1233 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 ZNF444Q8N0Y2 327 aaPredicted RBP15.73■□□□□ 0.11
CKAP2-202ENST00000378034 ZCCHC17Q9NP64 241 aaKnown RBP15.73■□□□□ 0.11
CKAP2-202ENST00000378034 SAGE1Q9NXZ1 904 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 LAMA4Q16363 1823 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 A0A0G2JLL6 359 aaPredicted RBP15.73■□□□□ 0.11
CKAP2-202ENST00000378034 ZNF213O14771 459 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 FGRP09769 529 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 NT5C2P49902 561 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 RAB3GAP1Q15042 981 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 FASTKD5Q7L8L6 764 aaKnown RBP15.73■□□□□ 0.11
CKAP2-202ENST00000378034 PRRT2Q7Z6L0 340 aaPredicted RBP15.73■□□□□ 0.11
CKAP2-202ENST00000378034 IFNL1Q8IU54 200 aa15.73■□□□□ 0.11
CKAP2-202ENST00000378034 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.73■□□□□ 0.11
CKAP2-202ENST00000378034 PTPRFP10586 1907 aa15.72■□□□□ 0.11
CKAP2-202ENST00000378034 C19orf81C9J6K1 198 aa15.72■□□□□ 0.11
CKAP2-202ENST00000378034 AKR1B1P15121 316 aa15.72■□□□□ 0.11
CKAP2-202ENST00000378034 GUCY1A2P33402 732 aa15.72■□□□□ 0.11
CKAP2-202ENST00000378034 SPP2Q13103 211 aa15.72■□□□□ 0.11
CKAP2-202ENST00000378034 IMMTQ16891 758 aaKnown RBP15.72■□□□□ 0.11
CKAP2-202ENST00000378034 SHROOM1Q2M3G4 852 aaPredicted RBP15.72■□□□□ 0.11
CKAP2-202ENST00000378034 BRI3BPQ8WY22 251 aa15.72■□□□□ 0.11
CKAP2-202ENST00000378034 RNF41Q9H4P4 317 aaPredicted RBP15.72■□□□□ 0.11
CKAP2-202ENST00000378034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.72■□□□□ 0.11
CKAP2-202ENST00000378034 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
CKAP2-202ENST00000378034 TRIM75PA6NK02 468 aa15.71■□□□□ 0.11
CKAP2-202ENST00000378034 ORC4O43929 436 aa15.71■□□□□ 0.11
CKAP2-202ENST00000378034 BACE1P56817 501 aa15.71■□□□□ 0.11
CKAP2-202ENST00000378034 CTDSPL2Q05D32 466 aa15.71■□□□□ 0.11
CKAP2-202ENST00000378034 SH3D19Q5HYK7 790 aa15.71■□□□□ 0.11
CKAP2-202ENST00000378034 CCDC84Q86UT8 332 aaPredicted RBP15.71■□□□□ 0.11
CKAP2-202ENST00000378034 KANSL2Q9H9L4 492 aa15.71■□□□□ 0.11
CKAP2-202ENST00000378034 GREB1LQ9C091 1923 aaPredicted RBP15.71■□□□□ 0.11
CKAP2-202ENST00000378034 USP17L10C9JJH3 530 aa15.71■□□□□ 0.1
CKAP2-202ENST00000378034 SEPT2Q15019 361 aa15.71■□□□□ 0.1
CKAP2-202ENST00000378034 AKNAD1Q5T1N1 836 aa15.71■□□□□ 0.1
CKAP2-202ENST00000378034 STK11IPQ8N1F8 1099 aa15.71■□□□□ 0.1
CKAP2-202ENST00000378034 PROCA1Q8NCQ7 364 aaPredicted RBP15.71■□□□□ 0.1
CKAP2-202ENST00000378034 STAG1Q8WVM7 1258 aa15.71■□□□□ 0.1
CKAP2-202ENST00000378034 MAP4K1Q92918 833 aa15.71■□□□□ 0.1
CKAP2-202ENST00000378034 PTPN18Q99952 460 aa15.71■□□□□ 0.1
CKAP2-202ENST00000378034 CFHR5Q9BXR6 569 aa15.71■□□□□ 0.1
CKAP2-202ENST00000378034 RNF186Q9NXI6 227 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms