RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CYP2D6P10635 497 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 MX1P20591 662 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 JAG1P78504 1218 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 HDAC1Q13547 482 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 MTMR2Q13614 643 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 RAB3GAP1Q15042 981 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 CERKLQ49MI3 558 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 TREML2Q5T2D2 321 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 METTL16Q86W50 562 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 AMOTL1Q8IY63 956 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 KBTBD3Q8NAB2 608 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 FEZ1Q99689 392 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 ARHGAP39Q9C0H5 1083 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 EHD4Q9H223 541 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 TMOD4Q9NZQ9 345 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 AGTPBP1Q9UPW5 1226 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 MYH7P12883 1935 aa13.93□□□□□ -0.18
SMARCE1-203ENST00000377808 MPHOSPH10O00566 681 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 GLRX3O76003 335 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 FMNL1O95466 1100 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 LACTBP83111 547 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 CAP1Q01518 475 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 EVX2Q03828 476 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 ZYXQ15942 572 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 ABCB5Q2M3G0 1257 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 C17orf99Q6UX52 265 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 PROCA1Q8NCQ7 364 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 PUS7LQ9H0K6 701 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 CABP5Q9NP86 173 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 ATP8A2Q9NTI2 1148 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 PNMA3Q9UL41 463 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 PTPN22Q9Y2R2 807 aa13.92□□□□□ -0.18
SMARCE1-203ENST00000377808 RNF113AO15541 343 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 OSBPP22059 807 aa13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 PSMC4P43686 418 aa13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 IRX6P78412 446 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 PABPC4Q13310 644 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 AAMPQ13685 434 aa13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 LRRFIP1Q32MZ4 808 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 TATDN1Q6P1N9 297 aa13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 SLC45A1Q9Y2W3 748 aa13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 PTPRFP10586 1907 aa13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 DDX60LQ5H9U9 1706 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-203ENST00000377808 USP17L10C9JJH3 530 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 ZFYP08048 801 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 SHMT1P34896 483 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 BACE1P56817 501 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 IRX3P78415 501 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 SLC44A5Q8NCS7 719 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 PI4K2BQ8TCG2 481 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 APPBP2Q92624 585 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 DYNLL2Q96FJ2 89 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 LNPKQ9C0E8 428 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 PTCH2Q9Y6C5 1203 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 ZSWIM8A7E2V4 1837 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 ADGRA2Q96PE1 1338 aa13.9□□□□□ -0.18
SMARCE1-203ENST00000377808 CYP2D7A0A087X1C5 515 aa13.9□□□□□ -0.19
SMARCE1-203ENST00000377808 ANKRD13CQ8N6S4 541 aa13.9□□□□□ -0.19
SMARCE1-203ENST00000377808 LOC285556D6RIA3 1793 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 C19orf81C9J6K1 198 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 USP17L21D6R901 530 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 MYCP01106 439 aaPredicted RBP13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 APPP05067 770 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 BCRP11274 1271 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 HOXD10P28358 340 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 FCGRTP55899 365 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 SLC9C1Q4G0N8 1177 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 SH3D19Q5HYK7 790 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 USP17L2Q6R6M4 530 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 STK11IPQ8N1F8 1099 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 OSBP2Q969R2 916 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 SWAP70Q9UH65 585 aa13.89□□□□□ -0.19
SMARCE1-203ENST00000377808 BAZ2AQ9UIF9 1905 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 M0R2C6 588 aa13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 GPAA1O43292 621 aa13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 CTGFP29279 349 aa13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 TDO2P48775 406 aa13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 GABPAQ06546 454 aa13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 SEPT2Q15019 361 aa13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 RAET1EQ8TD07 263 aa13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 TRIM47Q96LD4 638 aa13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 ASCC2Q9H1I8 757 aaPredicted RBP13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 ARPP21Q9UBL0 812 aaPredicted RBP13.88□□□□□ -0.19
SMARCE1-203ENST00000377808 MYPNQ86TC9 1320 aa13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 MINDY4BA8MYZ0 360 aa13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 TNPO2O14787 897 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 GNRH1P01148 92 aa13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 IGHDP01880 384 aa13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 PDE1AP54750 535 aa13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 MLLT1Q03111 559 aaPredicted RBP13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 C12orf60Q5U649 245 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms