RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 PIGBQ92521 554 aa13.13□□□□□ -0.31
SEC23B-204ENST00000377475 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.31
SEC23B-204ENST00000377475 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
SEC23B-204ENST00000377475 CPVLQ9H3G5 476 aa13.13□□□□□ -0.31
SEC23B-204ENST00000377475 EPB41L4AQ9HCS5 686 aaPredicted RBP13.13□□□□□ -0.31
SEC23B-204ENST00000377475 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
SEC23B-204ENST00000377475 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
SEC23B-204ENST00000377475 MACROD2A1Z1Q3 448 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 FANCGO15287 622 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 IGHMBP2P38935 993 aaKnown RBP13.12□□□□□ -0.31
SEC23B-204ENST00000377475 KIAA1328Q86T90 577 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 REXO1L1PQ8IX06 675 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 ZBTB38Q8NAP3 1195 aaPredicted RBP13.12□□□□□ -0.31
SEC23B-204ENST00000377475 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 INTS13Q9NVM9 706 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 RSPH14Q9UHP6 348 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 TNKSO95271 1327 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 SYNRGQ9UMZ2 1314 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 N4BP1O75113 896 aaKnown RBP13.12□□□□□ -0.31
SEC23B-204ENST00000377475 SASH3O75995 380 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 KRT9P35527 623 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 EARS2Q5JPH6 523 aaKnown RBP13.12□□□□□ -0.31
SEC23B-204ENST00000377475 RESP18Q5W5W9 173 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 WASF1Q92558 559 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 NWD1Q149M9 1564 aa13.12□□□□□ -0.31
SEC23B-204ENST00000377475 PTPROQ16827 1216 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 NLRP10Q86W26 655 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 GSPT2Q8IYD1 628 aaKnown RBP13.11□□□□□ -0.31
SEC23B-204ENST00000377475 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEC23B-204ENST00000377475 AKAP12Q02952 1782 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 FAM208AQ9UK61 1670 aaKnown RBP13.11□□□□□ -0.31
SEC23B-204ENST00000377475 TOB1P50616 345 aaPredicted RBP13.11□□□□□ -0.31
SEC23B-204ENST00000377475 RNASE9P60153 205 aaKnown RBP13.11□□□□□ -0.31
SEC23B-204ENST00000377475 PTPAQ15257 358 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 CATIPQ7Z7H3 387 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 HDAC6Q9UBN7 1215 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 TRIM49BA6NDI0 452 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 PATL2C9JE40 543 aaKnown RBP13.11□□□□□ -0.31
SEC23B-204ENST00000377475 TADA3O75528 432 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 SSBP05455 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEC23B-204ENST00000377475 PTGDRQ13258 359 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 TTC19Q6DKK2 380 aaPredicted RBP13.11□□□□□ -0.31
SEC23B-204ENST00000377475 TRIM65Q6PJ69 517 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 RAD9BQ6WBX8 426 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 TC2NQ8N9U0 490 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 IGDCC4Q8TDY8 1250 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 JADE2Q9NQC1 790 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 AATFQ9NY61 560 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEC23B-204ENST00000377475 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
SEC23B-204ENST00000377475 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 NUTM2BA6NNL0 878 aaPredicted RBP13.1□□□□□ -0.31
SEC23B-204ENST00000377475 NUTM2EB1AL46 878 aaPredicted RBP13.1□□□□□ -0.31
SEC23B-204ENST00000377475 IKBKBO14920 756 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 IPO7O95373 1038 aaKnown RBP13.1□□□□□ -0.31
SEC23B-204ENST00000377475 MMP1P03956 469 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 LONRF2Q1L5Z9 754 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 LEKR1Q6ZMV7 388 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 GDAQ9Y2T3 454 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 PP2D1A8MPX8 630 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 RILPL1Q5EBL4 403 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
SEC23B-204ENST00000377475 AGLP35573 1532 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 CTAGE9A4FU28 777 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 USP17L12C9JPN9 530 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 USP17L21D6R901 530 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 IQCA1Q86XH1 822 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 ANKRD13CQ8N6S4 541 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 CTCFLQ8NI51 663 aaPredicted RBP13.1□□□□□ -0.31
SEC23B-204ENST00000377475 AGXT2Q9BYV1 514 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 KRT23Q9C075 422 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 HSD3B7Q9H2F3 369 aa13.1□□□□□ -0.31
SEC23B-204ENST00000377475 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
SEC23B-204ENST00000377475 CCDC196A0A1B0GTZ2 297 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 EFCAB8A8MWE9 144 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 WNT7AO00755 349 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 TRIM66O15016 1216 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 CD44P16070 742 aaKnown RBP13.09□□□□□ -0.31
SEC23B-204ENST00000377475 PUM3Q15397 648 aaKnown RBP13.09□□□□□ -0.31
SEC23B-204ENST00000377475 CCDC178Q5BJE1 867 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 CC2D1AQ6P1N0 951 aaPredicted RBP13.09□□□□□ -0.31
SEC23B-204ENST00000377475 TRIM47Q96LD4 638 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 AK7Q96M32 723 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 MARCH6O60337 910 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 DEXIO95424 95 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 PCCAP05165 728 aaPredicted RBP13.09□□□□□ -0.31
SEC23B-204ENST00000377475 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 VEGFAP15692 232 aaPredicted RBP13.09□□□□□ -0.31
SEC23B-204ENST00000377475 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
SEC23B-204ENST00000377475 ESR2Q92731 530 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 CENPHQ9H3R5 247 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 ZHX3Q9H4I2 956 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 CEP131Q9UPN4 1083 aa13.09□□□□□ -0.31
SEC23B-204ENST00000377475 RIPOR2Q9Y4F9 1068 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms