RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PAK1Q13153 545 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 PAK2Q13177 524 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 COPS6Q7L5N1 327 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 SDCCAG3Q96C92 435 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 ANXA1P04083 346 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 COG7P83436 770 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 VSIG1Q86XK7 387 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 C8orf37Q96NL8 207 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 MEIS3Q99687 375 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 DNM2P50570 870 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
VPS13A-204ENST00000376634 INPP1P49441 399 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 PEX26Q7Z412 305 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 SECISBP2LQ93073 1101 aaKnown RBP13.8□□□□□ -0.2
VPS13A-204ENST00000376634 JAG2Q9Y219 1238 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.8□□□□□ -0.2
VPS13A-204ENST00000376634 PARP2Q9UGN5 583 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 ZFYVE9O95405 1425 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 CSGALNACT2Q8N6G5 542 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 AZI2Q9H6S1 392 aa13.8□□□□□ -0.2
VPS13A-204ENST00000376634 AK2P54819 239 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 RBBP5Q15291 538 aaKnown RBP13.79□□□□□ -0.2
VPS13A-204ENST00000376634 RXRAP19793 462 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 LZTS2Q9BRK4 669 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 IBTKQ9P2D0 1353 aaPredicted RBP13.79□□□□□ -0.2
VPS13A-204ENST00000376634 DZIP3Q86Y13 1208 aaKnown RBP13.79□□□□□ -0.2
VPS13A-204ENST00000376634 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 PDE4DQ08499 809 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 BSPRYQ5W0U4 402 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 HAUS1Q96CS2 278 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 Q9H521 79 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 DISP3Q9P2K9 1392 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 MAN1A1P33908 653 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
VPS13A-204ENST00000376634 TEX11Q8IYF3 940 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 ERO1AQ96HE7 468 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
VPS13A-204ENST00000376634 A0A1B0GVL5 298 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 DEXIO95424 95 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 GSTA1P08263 222 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 GSTA2P09210 222 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 TFCP2L1Q9NZI6 479 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 USTQ9Y2C2 406 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 TRPM2O94759 1503 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 KIAA0586Q9BVV6 1533 aa13.79□□□□□ -0.2
VPS13A-204ENST00000376634 SMAP1Q8IYB5 467 aaPredicted RBP13.78□□□□□ -0.2
VPS13A-204ENST00000376634 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 PRPF6O94906 941 aaKnown RBP13.78□□□□□ -0.2
VPS13A-204ENST00000376634 SND1Q7KZF4 910 aaKnown RBP eCLIP13.78□□□□□ -0.2
VPS13A-204ENST00000376634 IFIH1Q9BYX4 1025 aaKnown RBP13.78□□□□□ -0.2
VPS13A-204ENST00000376634 RAD50Q92878 1312 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 LMBR1LQ6UX01 489 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 BAG5Q9UL15 447 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
VPS13A-204ENST00000376634 SFMBT2Q5VUG0 894 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 KCNH3Q9ULD8 1083 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 KRT19P08727 400 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 ORC6Q9Y5N6 252 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
VPS13A-204ENST00000376634 ANKRD20A3Q5VUR7 823 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 TTC6Q86TZ1 520 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 ANKRD44Q8N8A2 993 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 CNBD1Q8NA66 436 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 PFDN6O15212 129 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 RPRD2Q5VT52 1461 aaKnown RBP13.78□□□□□ -0.2
VPS13A-204ENST00000376634 SYCP2Q9BX26 1530 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 RIMBP2O15034 1052 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 STAM2O75886 525 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 MYCLP12524 364 aaPredicted RBP13.78□□□□□ -0.2
VPS13A-204ENST00000376634 DBN1Q16643 649 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 FCHSD1Q86WN1 690 aa13.78□□□□□ -0.2
VPS13A-204ENST00000376634 BICC1Q9H694 974 aaKnown RBP13.78□□□□□ -0.2
VPS13A-204ENST00000376634 OPHN1O60890 802 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 TRIM50Q86XT4 487 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 MGARPQ8TDB4 240 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 DENND2AQ9ULE3 1009 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 SMIM24O75264 130 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 PUM3Q15397 648 aaKnown RBP13.77□□□□□ -0.2
VPS13A-204ENST00000376634 NXNQ6DKJ4 435 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 ACEP12821 1306 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 PLCH2O75038 1416 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 DNAJC8O75937 253 aaPredicted RBP13.77□□□□□ -0.2
VPS13A-204ENST00000376634 ARHGAP4P98171 946 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 MYCT1Q8N699 235 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 BEGAINQ9BUH8 593 aa13.77□□□□□ -0.2
VPS13A-204ENST00000376634 IRS4O14654 1257 aaPredicted RBP13.77□□□□□ -0.21
VPS13A-204ENST00000376634 PNMA8AQ86V59 439 aaPredicted RBP13.77□□□□□ -0.21
VPS13A-204ENST00000376634 LUC7L3O95232 432 aaKnown RBP13.77□□□□□ -0.21
VPS13A-204ENST00000376634 OATP04181 439 aa13.77□□□□□ -0.21
VPS13A-204ENST00000376634 TFCP2Q12800 502 aa13.77□□□□□ -0.21
VPS13A-204ENST00000376634 CXorf38Q8TB03 319 aa13.77□□□□□ -0.21
VPS13A-204ENST00000376634 MAP2K2P36507 400 aa13.77□□□□□ -0.21
VPS13A-204ENST00000376634 MAST3O60307 1309 aa13.77□□□□□ -0.21
VPS13A-204ENST00000376634 TRIM68Q6AZZ1 485 aa13.77□□□□□ -0.21
VPS13A-204ENST00000376634 VPS16Q9H269 839 aa13.77□□□□□ -0.21
VPS13A-204ENST00000376634 ANGEL1Q9UNK9 670 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms