RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 LRRC24Q50LG9 513 aa21.86■■□□□ 1.09
H2AFX-201ENST00000375167 TMEM31Q5JXX7 168 aa21.86■■□□□ 1.09
H2AFX-201ENST00000375167 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.86■■□□□ 1.09
H2AFX-201ENST00000375167 TMOD4Q9NZQ9 345 aa21.86■■□□□ 1.09
H2AFX-201ENST00000375167 USP17L5A8MUK1 530 aa21.85■■□□□ 1.09
H2AFX-201ENST00000375167 TBC1D12O60347 775 aa21.85■■□□□ 1.09
H2AFX-201ENST00000375167 EPHB4P54760 987 aa21.85■■□□□ 1.09
H2AFX-201ENST00000375167 GTF3C2Q8WUA4 911 aaPredicted RBP21.85■■□□□ 1.09
H2AFX-201ENST00000375167 EDC3Q96F86 508 aaKnown RBP21.85■■□□□ 1.09
H2AFX-201ENST00000375167 PRDM12Q9H4Q4 367 aa21.85■■□□□ 1.09
H2AFX-201ENST00000375167 F6X3S4 739 aa21.84■■□□□ 1.09
H2AFX-201ENST00000375167 GLRX3O76003 335 aaKnown RBP21.84■■□□□ 1.09
H2AFX-201ENST00000375167 HOXA7P31268 230 aaPredicted RBP21.84■■□□□ 1.09
H2AFX-201ENST00000375167 PAGR1Q9BTK6 254 aa21.84■■□□□ 1.09
H2AFX-201ENST00000375167 FAM196BA6NMK8 535 aa21.83■■□□□ 1.08
H2AFX-201ENST00000375167 ATP2B2Q01814 1243 aa21.83■■□□□ 1.08
H2AFX-201ENST00000375167 FPGSQ05932 587 aa21.83■■□□□ 1.08
H2AFX-201ENST00000375167 MTMR2Q13614 643 aa21.83■■□□□ 1.08
H2AFX-201ENST00000375167 FLRT1Q9NZU1 646 aa21.83■■□□□ 1.08
H2AFX-201ENST00000375167 CXXC1Q9P0U4 656 aaPredicted RBP21.83■■□□□ 1.08
H2AFX-201ENST00000375167 RBPJLQ9UBG7 517 aa21.83■■□□□ 1.08
H2AFX-201ENST00000375167 TACC3Q9Y6A5 838 aa21.83■■□□□ 1.08
H2AFX-201ENST00000375167 SLC5A1P13866 664 aa21.82■■□□□ 1.08
H2AFX-201ENST00000375167 C1orf53Q5VUE5 145 aa21.82■■□□□ 1.08
H2AFX-201ENST00000375167 DDX4Q9NQI0 724 aaKnown RBP21.82■■□□□ 1.08
H2AFX-201ENST00000375167 PLXNA1Q9UIW2 1896 aa21.81■■□□□ 1.08
H2AFX-201ENST00000375167 MYCNP04198 464 aaPredicted RBP21.81■■□□□ 1.08
H2AFX-201ENST00000375167 RAG1P15918 1043 aa21.81■■□□□ 1.08
H2AFX-201ENST00000375167 FGFR2P21802 821 aa21.81■■□□□ 1.08
H2AFX-201ENST00000375167 IGFBP4P22692 258 aa21.81■■□□□ 1.08
H2AFX-201ENST00000375167 AAK1Q2M2I8 961 aa21.81■■□□□ 1.08
H2AFX-201ENST00000375167 Q3C1V9 767 aa21.81■■□□□ 1.08
H2AFX-201ENST00000375167 SUCLG2Q96I99 432 aa21.81■■□□□ 1.08
H2AFX-201ENST00000375167 EPHX3Q9H6B9 360 aa21.81■■□□□ 1.08
H2AFX-201ENST00000375167 GAKO14976 1311 aa21.81■■□□□ 1.08
H2AFX-201ENST00000375167 CLTBP09497 229 aa21.8■■□□□ 1.08
H2AFX-201ENST00000375167 BMP1P13497 986 aa21.8■■□□□ 1.08
H2AFX-201ENST00000375167 CAP2P40123 477 aa21.8■■□□□ 1.08
H2AFX-201ENST00000375167 TLE2Q04725 743 aa21.8■■□□□ 1.08
H2AFX-201ENST00000375167 CCDC129Q6ZRS4 1044 aa21.8■■□□□ 1.08
H2AFX-201ENST00000375167 SALL1Q9NSC2 1324 aa21.8■■□□□ 1.08
H2AFX-201ENST00000375167 ITGB8P26012 769 aa21.79■■□□□ 1.08
H2AFX-201ENST00000375167 ADCYAP1R1P41586 468 aa21.79■■□□□ 1.08
H2AFX-201ENST00000375167 BACE1P56817 501 aa21.79■■□□□ 1.08
H2AFX-201ENST00000375167 SLC15A5A6NIM6 579 aa21.78■■□□□ 1.08
H2AFX-201ENST00000375167 CYBAP13498 195 aa21.78■■□□□ 1.08
H2AFX-201ENST00000375167 CYP2C19P33261 490 aa21.78■■□□□ 1.08
H2AFX-201ENST00000375167 CCNA1P78396 465 aa21.78■■□□□ 1.08
H2AFX-201ENST00000375167 WDR78Q5VTH9 848 aa21.78■■□□□ 1.08
H2AFX-201ENST00000375167 SLF2Q8IX21 1173 aa21.78■■□□□ 1.08
H2AFX-201ENST00000375167 KAZALD1Q96I82 304 aa21.78■■□□□ 1.08
H2AFX-201ENST00000375167 WDR18Q9BV38 432 aa21.78■■□□□ 1.08
H2AFX-201ENST00000375167 PRKRIP1Q9H875 184 aaPredicted RBP21.78■■□□□ 1.08
H2AFX-201ENST00000375167 KIAA0355O15063 1070 aa21.77■■□□□ 1.08
H2AFX-201ENST00000375167 ALDH1L1O75891 902 aa21.77■■□□□ 1.08
H2AFX-201ENST00000375167 ADGRE1Q14246 886 aa21.77■■□□□ 1.08
H2AFX-201ENST00000375167 DZIP1Q86YF9 867 aaKnown RBP21.77■■□□□ 1.08
H2AFX-201ENST00000375167 TRPV1Q8NER1 839 aa21.77■■□□□ 1.08
H2AFX-201ENST00000375167 LPIN2Q92539 896 aa21.77■■□□□ 1.08
H2AFX-201ENST00000375167 FERMT2Q96AC1 680 aa21.77■■□□□ 1.08
H2AFX-201ENST00000375167 GNL3LQ9NVN8 582 aaKnown RBP21.77■■□□□ 1.08
H2AFX-201ENST00000375167 IVNS1ABPQ9Y6Y0 642 aa21.77■■□□□ 1.08
H2AFX-201ENST00000375167 HOXC6P09630 235 aa21.76■■□□□ 1.07
H2AFX-201ENST00000375167 NCBP3Q53F19 620 aaKnown RBP21.76■■□□□ 1.07
H2AFX-201ENST00000375167 ZGPATQ8N5A5 531 aaKnown RBP21.76■■□□□ 1.07
H2AFX-201ENST00000375167 PBX4Q9BYU1 374 aa21.76■■□□□ 1.07
H2AFX-201ENST00000375167 NDUFB9Q9Y6M9 179 aa21.76■■□□□ 1.07
H2AFX-201ENST00000375167 C19orf81C9J6K1 198 aa21.75■■□□□ 1.07
H2AFX-201ENST00000375167 PBX2P40425 430 aa21.75■■□□□ 1.07
H2AFX-201ENST00000375167 BTDP43251 543 aa21.75■■□□□ 1.07
H2AFX-201ENST00000375167 BICC1Q9H694 974 aaKnown RBP21.75■■□□□ 1.07
H2AFX-201ENST00000375167 PTPREP23469 700 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 RABL6Q3YEC7 729 aaPredicted RBP21.74■■□□□ 1.07
H2AFX-201ENST00000375167 ANO1Q5XXA6 986 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 DENND2AQ9ULE3 1009 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 GPR37L1O60883 481 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 NPM3O75607 178 aaKnown RBP21.74■■□□□ 1.07
H2AFX-201ENST00000375167 MRE11P49959 708 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 TFF2Q03403 129 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 CCDC174Q6PII3 467 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 SRCIN1Q9C0H9 1055 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 TMEM39AQ9NV64 488 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 RABGAP1Q9Y3P9 1069 aa21.74■■□□□ 1.07
H2AFX-201ENST00000375167 SEMA3EO15041 775 aa21.73■■□□□ 1.07
H2AFX-201ENST00000375167 SEPT4O43236 478 aa21.73■■□□□ 1.07
H2AFX-201ENST00000375167 ASNSP08243 561 aa21.73■■□□□ 1.07
H2AFX-201ENST00000375167 KCNQ1P51787 676 aa21.73■■□□□ 1.07
H2AFX-201ENST00000375167 GRB14Q14449 540 aa21.73■■□□□ 1.07
H2AFX-201ENST00000375167 RRP1BQ14684 758 aaKnown RBP21.73■■□□□ 1.07
H2AFX-201ENST00000375167 LRRC41Q15345 812 aa21.73■■□□□ 1.07
H2AFX-201ENST00000375167 NPLOC4Q8TAT6 608 aa21.73■■□□□ 1.07
H2AFX-201ENST00000375167 KLHDC4Q8TBB5 520 aa21.73■■□□□ 1.07
H2AFX-201ENST00000375167 MROH7-TTC4A0A0A0MT08 1334 aa21.72■■□□□ 1.07
H2AFX-201ENST00000375167 USP17L10C9JJH3 530 aa21.72■■□□□ 1.07
H2AFX-201ENST00000375167 PQBP1O60828 265 aaKnown RBP21.72■■□□□ 1.07
H2AFX-201ENST00000375167 SLC4A10Q6U841 1118 aa21.72■■□□□ 1.07
H2AFX-201ENST00000375167 FAM163AQ96GL9 167 aaPredicted RBP21.72■■□□□ 1.07
H2AFX-201ENST00000375167 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.72■■□□□ 1.075e-7■□□□□ 9.9
H2AFX-201ENST00000375167 HERC5Q9UII4 1024 aaKnown RBP21.72■■□□□ 1.07
H2AFX-201ENST00000375167 MSRAQ9UJ68 235 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms