RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 BICD2Q8TD16 824 aa20.89■□□□□ 0.93
HLA-DQB1-201ENST00000374943 TGFBRAP1Q8WUH2 860 aa20.89■□□□□ 0.93
HLA-DQB1-201ENST00000374943 NUP133Q8WUM0 1156 aa20.89■□□□□ 0.93
HLA-DQB1-201ENST00000374943 ANP32BQ92688 251 aaKnown RBP20.89■□□□□ 0.93
HLA-DQB1-201ENST00000374943 EYA3Q99504 573 aa20.89■□□□□ 0.93
HLA-DQB1-201ENST00000374943 RHBDL3P58872 404 aa20.88■□□□□ 0.93
HLA-DQB1-201ENST00000374943 GTF2IP78347 998 aa20.88■□□□□ 0.93
HLA-DQB1-201ENST00000374943 CEBPZQ03701 1054 aaKnown RBP20.88■□□□□ 0.93
HLA-DQB1-201ENST00000374943 RBM43Q6ZSC3 357 aaKnown RBP20.88■□□□□ 0.93
HLA-DQB1-201ENST00000374943 LINC00301Q8NCQ3 95 aa20.88■□□□□ 0.93
HLA-DQB1-201ENST00000374943 PPP1R9BQ96SB3 815 aa20.88■□□□□ 0.93
HLA-DQB1-201ENST00000374943 CLSTN2Q9H4D0 955 aa20.88■□□□□ 0.93
HLA-DQB1-201ENST00000374943 DACT1Q9NYF0 836 aa20.88■□□□□ 0.93
HLA-DQB1-201ENST00000374943 H0YIN7 160 aa20.87■□□□□ 0.93
HLA-DQB1-201ENST00000374943 RIMBP2O15034 1052 aa20.87■□□□□ 0.93
HLA-DQB1-201ENST00000374943 CCDC178Q5BJE1 867 aa20.87■□□□□ 0.93
HLA-DQB1-201ENST00000374943 TEX11Q8IYF3 940 aa20.87■□□□□ 0.93
HLA-DQB1-201ENST00000374943 KCNG4Q8TDN1 519 aa20.87■□□□□ 0.93
HLA-DQB1-201ENST00000374943 ANKS1AQ92625 1134 aa20.87■□□□□ 0.93
HLA-DQB1-201ENST00000374943 ADAMTSL1Q8N6G6 1762 aa20.87■□□□□ 0.93
HLA-DQB1-201ENST00000374943 PSME4Q14997 1843 aa20.87■□□□□ 0.93
HLA-DQB1-201ENST00000374943 SCN9AQ15858 1988 aa20.87■□□□□ 0.93
HLA-DQB1-201ENST00000374943 TSPY2A6NKD2 308 aa20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 POLR3DP05423 398 aaPredicted RBP20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 FUT2Q10981 343 aa20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 MAP3K11Q16584 847 aa20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 OLFM4Q6UX06 510 aa20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 MMP1P03956 469 aa20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 FAM47AQ5JRC9 791 aa20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 MAPKAPK5Q8IW41 473 aa20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 ZNF622Q969S3 477 aaKnown RBP eCLIP20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 TCP11L1Q9NUJ3 509 aa20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 DAGLAQ9Y4D2 1042 aa20.86■□□□□ 0.93
HLA-DQB1-201ENST00000374943 FLT1P17948 1338 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 A0A1W2PQ27 194 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 A0A1W2PQ64 194 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 A0A1W2PQD8 194 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 NR1I2O75469 434 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 GUCY1A2P33402 732 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 STK38Q15208 465 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 ANO1Q5XXA6 986 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 RCSD1Q6JBY9 416 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 DGKHQ86XP1 1220 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 MAP3K14Q99558 947 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 ZNF287Q9HBT7 754 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 CLIC4Q9Y696 253 aa20.85■□□□□ 0.93
HLA-DQB1-201ENST00000374943 UBE2Q2LH0YL09 131 aa20.84■□□□□ 0.93
HLA-DQB1-201ENST00000374943 PRPF3O43395 683 aaKnown RBP20.84■□□□□ 0.93
HLA-DQB1-201ENST00000374943 UVSSAQ2YD98 709 aa20.84■□□□□ 0.93
HLA-DQB1-201ENST00000374943 ADALQ6DHV7 355 aa20.84■□□□□ 0.93
HLA-DQB1-201ENST00000374943 TMTC3Q6ZXV5 915 aa20.84■□□□□ 0.93
HLA-DQB1-201ENST00000374943 CCAR1Q8IX12 1150 aaKnown RBP20.84■□□□□ 0.93
HLA-DQB1-201ENST00000374943 TNMDQ9H2S6 317 aa20.84■□□□□ 0.93
HLA-DQB1-201ENST00000374943 SNED1Q8TER0 1413 aa20.84■□□□□ 0.93
HLA-DQB1-201ENST00000374943 NMT2O60551 498 aa20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 ME1P48163 572 aa20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 TFAP4Q01664 338 aa20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 SAFBQ15424 915 aaKnown RBP eCLIP20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 C16orf86Q6ZW13 317 aa20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 CERS5Q8N5B7 392 aa20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 CNKSR1Q969H4 720 aa20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 DYNLL2Q96FJ2 89 aa20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 FOXP1Q9H334 677 aaPredicted RBP20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 PCDHA7Q9UN72 937 aa20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 KIF13BQ9NQT8 1826 aa20.83■□□□□ 0.93
HLA-DQB1-201ENST00000374943 SPTLC2O15270 562 aa20.83■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CCDC192P0DO97 292 aa20.83■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PLCD1P51178 756 aa20.83■□□□□ 0.92
HLA-DQB1-201ENST00000374943 GNL2Q13823 731 aaKnown RBP20.83■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CCDC73Q6ZRK6 1079 aa20.83■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PODNQ7Z5L7 613 aa20.83■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CTCFLQ8NI51 663 aaPredicted RBP20.83■□□□□ 0.92
HLA-DQB1-201ENST00000374943 MKNK2Q9HBH9 465 aa20.83■□□□□ 0.92
HLA-DQB1-201ENST00000374943 C10orf71Q711Q0 1435 aa20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 FKBP1AP62942 108 aaKnown RBP20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 AKAP17AQ02040 695 aaKnown RBP20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 FAM160A1Q05DH4 1040 aa20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 SLC39A14Q15043 492 aa20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CMTR1Q8N1G2 835 aaKnown RBP20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 ENGASEQ8NFI3 743 aa20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PDLIM2Q96JY6 352 aa20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 GOLPH3LQ9H4A5 285 aa20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 IL17RBQ9NRM6 502 aa20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CNTNAP5Q8WYK1 1306 aa20.82■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CTAGE5O15320 804 aa20.81■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PLEKHA8P1O95397 391 aa20.81■□□□□ 0.92
HLA-DQB1-201ENST00000374943 RASA1P20936 1047 aa20.81■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PKN1Q16512 942 aa20.81■□□□□ 0.92
HLA-DQB1-201ENST00000374943 DOK7Q18PE1 504 aa20.81■□□□□ 0.92
HLA-DQB1-201ENST00000374943 NOSTRINQ8IVI9 506 aa20.81■□□□□ 0.92
HLA-DQB1-201ENST00000374943 RNF214Q8ND24 703 aa20.81■□□□□ 0.92
HLA-DQB1-201ENST00000374943 MRPS27Q92552 414 aaKnown RBP20.81■□□□□ 0.92
HLA-DQB1-201ENST00000374943 SAP30BPQ9UHR5 308 aaKnown RBP20.81■□□□□ 0.92
HLA-DQB1-201ENST00000374943 XBP1P17861 261 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 SNW1Q13573 536 aaKnown RBP20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 SF3A1Q15459 793 aaKnown RBP20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 HHIPL2Q6UWX4 724 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 DIS3L2Q8IYB7 885 aaKnown RBP20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 ZNF444Q8N0Y2 327 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms