RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ELOA2Q8IYF1 753 aaPredicted RBP14.61□□□□□ -0.07
PRPF4-202ENST00000374199 PHKBQ93100 1093 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 UBAC1Q9BSL1 405 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 MYL10Q9BUA6 226 aa14.61□□□□□ -0.07
PRPF4-202ENST00000374199 NR1I2O75469 434 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 SLC39A14Q15043 492 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 DIXDC1Q155Q3 683 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 PHF20Q9BVI0 1012 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 GJB4Q9NTQ9 266 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 HPSEQ9Y251 543 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 PARP3Q9Y6F1 533 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 MINDY4BA8MYZ0 360 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 SLC3A2P08195 630 aaKnown RBP14.6□□□□□ -0.07
PRPF4-202ENST00000374199 CCDC178Q5BJE1 867 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 SLF2Q8IX21 1173 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 PCDHA7Q9UN72 937 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 ERICH2A1L162 156 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 NPHP1O15259 732 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 USP17L8P0C7I0 530 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 PDE4BQ07343 736 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 OTUD7BQ6GQQ9 843 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 CLIC4Q9Y696 253 aa14.6□□□□□ -0.07
PRPF4-202ENST00000374199 FER1L6Q2WGJ9 1857 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 IGKV6D-41A0A0C4DH26 115 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 UBE2Q2LH0YL09 131 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
PRPF4-202ENST00000374199 RXRAP19793 462 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 BTDP43251 543 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 HHIPL2Q6UWX4 724 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 IQCA1Q86XH1 822 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 ZKSCAN3Q9BRR0 538 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 DAGLAQ9Y4D2 1042 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 ANO1Q5XXA6 986 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 NFXL1Q6ZNB6 911 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 DACT1Q9NYF0 836 aa14.59□□□□□ -0.07
PRPF4-202ENST00000374199 RASA1P20936 1047 aa14.58□□□□□ -0.07
PRPF4-202ENST00000374199 TOB1P50616 345 aaPredicted RBP14.58□□□□□ -0.07
PRPF4-202ENST00000374199 FAM160A1Q05DH4 1040 aa14.58□□□□□ -0.07
PRPF4-202ENST00000374199 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.07
PRPF4-202ENST00000374199 IFIT1BQ5T764 474 aaKnown RBP14.58□□□□□ -0.07
PRPF4-202ENST00000374199 RAB11FIP4Q86YS3 637 aa14.58□□□□□ -0.07
PRPF4-202ENST00000374199 NUP62CLQ9H1M0 184 aa14.58□□□□□ -0.07
PRPF4-202ENST00000374199 SYNE3Q6ZMZ3 975 aa14.58□□□□□ -0.08
PRPF4-202ENST00000374199 MPNDQ8N594 471 aa14.58□□□□□ -0.08
PRPF4-202ENST00000374199 MRVI1Q9Y6F6 885 aa14.58□□□□□ -0.08
PRPF4-202ENST00000374199 COL4A5P29400 1685 aa14.58□□□□□ -0.08
PRPF4-202ENST00000374199 HDLBPQ00341 1268 aaKnown RBP14.58□□□□□ -0.08
PRPF4-202ENST00000374199 NOSTRINQ8IVI9 506 aa14.58□□□□□ -0.08
PRPF4-202ENST00000374199 FAM43AQ8N2R8 423 aa14.58□□□□□ -0.08
PRPF4-202ENST00000374199 CTAGE5O15320 804 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 PLCD1P51178 756 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 GRM4Q14833 912 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 MAP3K11Q16584 847 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 MCM9Q9NXL9 1143 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 M0R2N6 131 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 CMA1P23946 247 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 SMARCA1P28370 1054 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 GRIPAP1Q4V328 841 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 PODNQ7Z5L7 613 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 CATIPQ7Z7H3 387 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 TIGD1Q96MW7 591 aa14.57□□□□□ -0.08
PRPF4-202ENST00000374199 CAVIN2O95810 425 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 GUCY1B3Q02153 619 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 RRP12Q5JTH9 1297 aaKnown RBP14.56□□□□□ -0.08
PRPF4-202ENST00000374199 SLC26A6Q9BXS9 759 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 WDHD1O75717 1129 aaPredicted RBP14.56□□□□□ -0.08
PRPF4-202ENST00000374199 METTL16Q86W50 562 aaKnown RBP14.56□□□□□ -0.08
PRPF4-202ENST00000374199 SRBD1Q8N5C6 995 aaKnown RBP14.56□□□□□ -0.08
PRPF4-202ENST00000374199 SH3GLB2Q9NR46 395 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 JAG2Q9Y219 1238 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 SPTLC2O15270 562 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 NMT2O60551 498 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 EZH2Q15910 746 aaKnown RBP14.56□□□□□ -0.08
PRPF4-202ENST00000374199 SLC35G1Q2M3R5 365 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 TRIM22Q8IYM9 498 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 NEDD1Q8NHV4 660 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 MYH4Q9Y623 1939 aa14.56□□□□□ -0.08
PRPF4-202ENST00000374199 CCAR1Q8IX12 1150 aaKnown RBP14.55□□□□□ -0.08
PRPF4-202ENST00000374199 TGFBRAP1Q8WUH2 860 aa14.55□□□□□ -0.08
PRPF4-202ENST00000374199 EHD4Q9H223 541 aa14.55□□□□□ -0.08
PRPF4-202ENST00000374199 MAD2L2Q9UI95 211 aa14.55□□□□□ -0.08
PRPF4-202ENST00000374199 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
PRPF4-202ENST00000374199 PLEKHA8P1O95397 391 aa14.55□□□□□ -0.08
PRPF4-202ENST00000374199 RESP18Q5W5W9 173 aa14.55□□□□□ -0.08
PRPF4-202ENST00000374199 CC2D2BQ6DHV5 1058 aa14.55□□□□□ -0.08
PRPF4-202ENST00000374199 APOBEC3HQ6NTF7 200 aaKnown RBP14.55□□□□□ -0.08
PRPF4-202ENST00000374199 DPP8Q6V1X1 898 aaPredicted RBP14.55□□□□□ -0.08
PRPF4-202ENST00000374199 CCDC144CPQ8IYA2 1237 aa14.55□□□□□ -0.08
PRPF4-202ENST00000374199 ZNF579Q8NAF0 562 aaKnown RBP14.55□□□□□ -0.08
PRPF4-202ENST00000374199 MRPS27Q92552 414 aaKnown RBP14.55□□□□□ -0.08
PRPF4-202ENST00000374199 ZDHHC15Q96MV8 337 aa14.55□□□□□ -0.08
PRPF4-202ENST00000374199 EYA3Q99504 573 aa14.55□□□□□ -0.08
PRPF4-202ENST00000374199 NAP1L2Q9ULW6 460 aaPredicted RBP14.55□□□□□ -0.08
PRPF4-202ENST00000374199 PRDM1O75626 825 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 PFKFB3Q16875 520 aaPredicted RBP14.54□□□□□ -0.08
PRPF4-202ENST00000374199 DACT2Q5SW24 774 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 STRIP1Q5VSL9 837 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 OLFM4Q6UX06 510 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 CCDC192P0DO97 292 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms