RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 KBTBD3Q8NAB2 608 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 GOLGA1Q92805 767 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 HAUS7Q99871 368 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 ALG1Q9BT22 464 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 ALDH8A1Q9H2A2 487 aaPredicted RBP6.19□□□□□ -1.42
ATG4A-204ENST00000372246 NPDC1Q9NQX5 325 aaPredicted RBP6.19□□□□□ -1.42
ATG4A-204ENST00000372246 FAM198AQ9UFP1 575 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 CEMIPQ8WUJ3 1361 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 PXDNLA1KZ92 1463 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 ITSN1Q15811 1721 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 MAP2K7O14733 419 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 POLR2DO15514 142 aaKnown RBP6.19□□□□□ -1.42
ATG4A-204ENST00000372246 CASP14P31944 242 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 LIG3P49916 1009 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 FXR1P51114 621 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATG4A-204ENST00000372246 PSME1Q06323 249 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 NR5A1Q13285 461 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 CASP8Q14790 479 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 NOM1Q5C9Z4 860 aaKnown RBP6.19□□□□□ -1.42
ATG4A-204ENST00000372246 FBXW10Q5XX13 1052 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 KRT40Q6A162 431 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 TMED8Q6PL24 325 aaPredicted RBP6.19□□□□□ -1.42
ATG4A-204ENST00000372246 SYNE4Q8N205 404 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 GOLGA5Q8TBA6 731 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 KAT2BQ92831 832 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 HCSTQ9UBK5 93 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 MAN1B1Q9UKM7 699 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 JCADQ9P266 1359 aa6.19□□□□□ -1.42
ATG4A-204ENST00000372246 A0A087X0B3 334 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 A0A1W2PQ27 194 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 A0A1W2PQ64 194 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 A0A1W2PQD8 194 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 BTBD18B2RXH4 712 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 SNAP23O00161 211 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 WNT7AO00755 349 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 SEMA3EO15041 775 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 ZNF185O15231 689 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 ARHGAP6O43182 974 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 RANBP6O60518 1105 aaKnown RBP6.18□□□□□ -1.42
ATG4A-204ENST00000372246 ABCC6O95255 1503 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 CMA1P23946 247 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 FAM69CQ0P6D2 419 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 DPYDQ12882 1025 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 TBX2Q13207 712 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-204ENST00000372246 GPS2Q13227 327 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 PTPAQ15257 358 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 JAKMIP3Q5VZ66 844 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 KCNG4Q8TDN1 519 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 ZNF496Q96IT1 587 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-204ENST00000372246 AK7Q96M32 723 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 LLPHQ9BRT6 129 aaKnown RBP6.18□□□□□ -1.42
ATG4A-204ENST00000372246 POLR3EQ9NVU0 708 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 SMARCAL1Q9NZC9 954 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 RAI14Q9P0K7 980 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 AKAP12Q02952 1782 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 PLEKHG2Q9H7P9 1386 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 B4E1Z4 1266 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 C3orf80F5H4A9 247 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 SLC39A14Q15043 492 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 C1orf141Q5JVX7 400 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 SPECC1LQ69YQ0 1117 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 LEKR1Q6ZMV7 388 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 ATG9AQ7Z3C6 839 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 TBC1D10CQ8IV04 446 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 MICALL1Q8N3F8 863 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 RABGGTAQ92696 567 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 PSMB7Q99436 277 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 SLF1Q9BQI6 1058 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 TUBE1Q9UJT0 475 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 L1RE1Q9UN81 338 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 JRKLQ9Y4A0 524 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 SAMM50Q9Y512 469 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 ADGRG1Q9Y653 693 aa6.18□□□□□ -1.42
ATG4A-204ENST00000372246 RGPD8O14715 1765 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-204ENST00000372246 FAM170AA1A519 330 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 ZSCAN12O43309 604 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 NRDCO43847 1150 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 RNF40O75150 1001 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 APPP05067 770 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 IFIT1P09914 478 aaKnown RBP6.17□□□□□ -1.42
ATG4A-204ENST00000372246 KCNA6P17658 529 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 ERCC3P19447 782 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 PRSS12P56730 875 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 ZC3H6P61129 1189 aaKnown RBP6.17□□□□□ -1.42
ATG4A-204ENST00000372246 ERVK-24P63145 666 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 SETQ01105 290 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-204ENST00000372246 SF3A3Q12874 501 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATG4A-204ENST00000372246 EZH2Q15910 746 aaKnown RBP6.17□□□□□ -1.42
ATG4A-204ENST00000372246 TTC31Q49AM3 519 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-204ENST00000372246 ZMYM1Q5SVZ6 1142 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 ICE2Q659A1 982 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 OLFM4Q6UX06 510 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 THSD4Q6ZMP0 1018 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 SRGAP1Q7Z6B7 1085 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 EXOC4Q96A65 974 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 EPSTI1Q96J88 318 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 MAP3K14Q99558 947 aa6.17□□□□□ -1.42
ATG4A-204ENST00000372246 CHP1Q99653 195 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms