RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 IFIT3O14879 490 aaKnown RBP15.12■□□□□ 0.01
LDB3-203ENST00000372056 ENTPD3O75355 529 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 CXCL9Q07325 125 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 DLGAP5Q15398 846 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 SCAND2PQ9GZW5 306 aaPredicted RBP15.12■□□□□ 0.01
LDB3-203ENST00000372056 SWAP70Q9UH65 585 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 SCN9AQ15858 1988 aa15.11■□□□□ 0.01
LDB3-203ENST00000372056 COL2A1P02458 1487 aaPredicted RBP15.11■□□□□ 0.01
LDB3-203ENST00000372056 RAD17O75943 681 aa15.11■□□□□ 0.01
LDB3-203ENST00000372056 METAP2P50579 478 aaKnown RBP eCLIP15.11■□□□□ 0.01
LDB3-203ENST00000372056 RRP12Q5JTH9 1297 aaKnown RBP15.11■□□□□ 0.01
LDB3-203ENST00000372056 UBAC1Q9BSL1 405 aa15.11■□□□□ 0.01
LDB3-203ENST00000372056 KCNQ5Q9NR82 932 aa15.11■□□□□ 0.01
LDB3-203ENST00000372056 FLT1P17948 1338 aa15.11■□□□□ 0.01
LDB3-203ENST00000372056 ZNF646O15015 1829 aaPredicted RBP15.11■□□□□ 0.01
LDB3-203ENST00000372056 LAMB1P07942 1786 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 SYCE3A1L190 88 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 ZBTB43O43298 467 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 FOSBP53539 338 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 CDC42EP5Q6NZY7 148 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 NFXL1Q6ZNB6 911 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 ARHGAP27Q6ZUM4 889 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 PANK2Q9BZ23 570 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 EHD4Q9H223 541 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 TOMM22Q9NS69 142 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 ORC3Q9UBD5 711 aaPredicted RBP15.1■□□□□ 0.01
LDB3-203ENST00000372056 FOCADQ5VW36 1801 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 SCNN1DP51172 638 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 CFAP100Q494V2 611 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 LRSAM1Q6UWE0 723 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 MICU3Q86XE3 530 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 ZNF444Q8N0Y2 327 aaPredicted RBP15.1■□□□□ 0.01
LDB3-203ENST00000372056 RGS22Q8NE09 1264 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 LEO1Q8WVC0 666 aaPredicted RBP15.1■□□□□ 0.01
LDB3-203ENST00000372056 MKNK2Q9HBH9 465 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 NID2Q14112 1375 aa15.1■□□□□ 0.01
LDB3-203ENST00000372056 CYP2D7A0A087X1C5 515 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 SMIM22K7EJ46 135 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 GRIN3BO60391 1043 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 CDKL5O76039 1030 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 RXRAP19793 462 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 CDC27P30260 824 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
LDB3-203ENST00000372056 CPLX2Q6PUV4 134 aaKnown RBP15.09■□□□□ 0.01
LDB3-203ENST00000372056 FOXP4Q8IVH2 680 aaPredicted RBP15.09■□□□□ 0.01
LDB3-203ENST00000372056 STK11IPQ8N1F8 1099 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 SPATA32Q96LK8 384 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 OSBPL5Q9H0X9 879 aaPredicted RBP15.09■□□□□ 0.01
LDB3-203ENST00000372056 TCP11L1Q9NUJ3 509 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 TFIP11Q9UBB9 837 aaKnown RBP15.09■□□□□ 0.01
LDB3-203ENST00000372056 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.09■□□□□ 0.01
LDB3-203ENST00000372056 SLC12A7Q9Y666 1083 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 ZC3H4Q9UPT8 1303 aaKnown RBP15.09■□□□□ 0.01
LDB3-203ENST00000372056 NAV1Q8NEY1 1877 aa15.09■□□□□ 0.01
LDB3-203ENST00000372056 BAZ2AQ9UIF9 1905 aaKnown RBP15.08■□□□□ 0.01
LDB3-203ENST00000372056 CCDC196A0A1B0GTZ2 297 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 CCDC69A6NI79 296 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 GOLGA8AA7E2F4 631 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 WDHD1O75717 1129 aaPredicted RBP15.08■□□□□ 0.01
LDB3-203ENST00000372056 CALM1P0DP23 149 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 CALM2P0DP24 149 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 CALM3P0DP25 149 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 ZNF280AP59817 542 aaPredicted RBP15.08■□□□□ 0.01
LDB3-203ENST00000372056 CCDC183Q5T5S1 534 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 C16orf86Q6ZW13 317 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 MAPKAPK5Q8IW41 473 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 C8orf76Q96K31 380 aa15.08■□□□□ 0.01
LDB3-203ENST00000372056 FAM217BQ9NTX9 383 aaPredicted RBP15.08■□□□□ 0.01
LDB3-203ENST00000372056 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
LDB3-203ENST00000372056 SPDYE6P0CI01 402 aa15.08■□□□□ 0
LDB3-203ENST00000372056 PRKCSHP14314 528 aaPredicted RBP15.08■□□□□ 0
LDB3-203ENST00000372056 TNNI2P48788 182 aa15.08■□□□□ 0
LDB3-203ENST00000372056 GUCY1B3Q02153 619 aa15.08■□□□□ 0
LDB3-203ENST00000372056 TNFAIP1Q13829 316 aa15.08■□□□□ 0
LDB3-203ENST00000372056 WTAPQ15007 396 aa15.08■□□□□ 0
LDB3-203ENST00000372056 NTRK3Q16288 839 aa15.08■□□□□ 0
LDB3-203ENST00000372056 GPC2Q8N158 579 aa15.08■□□□□ 0
LDB3-203ENST00000372056 FBXO18Q8NFZ0 1043 aa15.08■□□□□ 0
LDB3-203ENST00000372056 CCDC17Q96LX7 622 aa15.08■□□□□ 0
LDB3-203ENST00000372056 ZKSCAN3Q9BRR0 538 aa15.08■□□□□ 0
LDB3-203ENST00000372056 MYL10Q9BUA6 226 aa15.08■□□□□ 0
LDB3-203ENST00000372056 MXD3Q9BW11 206 aa15.08■□□□□ 0
LDB3-203ENST00000372056 PI4KBQ9UBF8 816 aa15.08■□□□□ 0
LDB3-203ENST00000372056 CFAP45Q9UL16 551 aa15.08■□□□□ 0
LDB3-203ENST00000372056 DICER1Q9UPY3 1922 aaKnown RBP15.07■□□□□ 0
LDB3-203ENST00000372056 ECM29Q5VYK3 1845 aa15.07■□□□□ 0
LDB3-203ENST00000372056 ATL3Q6DD88 541 aa15.07■□□□□ 0
LDB3-203ENST00000372056 FAM83AQ86UY5 434 aa15.07■□□□□ 0
LDB3-203ENST00000372056 DGKHQ86XP1 1220 aa15.07■□□□□ 0
LDB3-203ENST00000372056 SERPINB13Q9UIV8 391 aa15.07■□□□□ 0
LDB3-203ENST00000372056 MYH1P12882 1939 aa15.07■□□□□ 0
LDB3-203ENST00000372056 TSPY2A6NKD2 308 aa15.06■□□□□ 0
LDB3-203ENST00000372056 H7C1D1 291 aa15.06■□□□□ 0
LDB3-203ENST00000372056 RANBP6O60518 1105 aaKnown RBP15.06■□□□□ 0
LDB3-203ENST00000372056 SEC23AQ15436 765 aa15.06■□□□□ 0
LDB3-203ENST00000372056 CCDC144CPQ8IYA2 1237 aa15.06■□□□□ 0
LDB3-203ENST00000372056 ZSCAN10Q96SZ4 725 aaPredicted RBP15.06■□□□□ 0
LDB3-203ENST00000372056 CDK5RAP2Q96SN8 1893 aa15.06■□□□□ 0
LDB3-203ENST00000372056 ATRNL1Q5VV63 1379 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms