RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CERKLQ49MI3 558 aaPredicted RBP17.7■□□□□ 0.42
COL9A1-204ENST00000370496 SBK1Q52WX2 424 aa17.7■□□□□ 0.42
COL9A1-204ENST00000370496 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
COL9A1-204ENST00000370496 SLC44A5Q8NCS7 719 aa17.7■□□□□ 0.42
COL9A1-204ENST00000370496 TAOK2Q9UL54 1235 aa17.7■□□□□ 0.42
COL9A1-204ENST00000370496 ZBTB21Q9ULJ3 1066 aa17.7■□□□□ 0.42
COL9A1-204ENST00000370496 IRF6O14896 467 aa17.69■□□□□ 0.42
COL9A1-204ENST00000370496 CHMLP26374 656 aa17.69■□□□□ 0.42
COL9A1-204ENST00000370496 GTF2A2P52657 109 aa17.69■□□□□ 0.42
COL9A1-204ENST00000370496 RRP1BQ14684 758 aaKnown RBP17.69■□□□□ 0.42
COL9A1-204ENST00000370496 TATDN1Q6P1N9 297 aa17.69■□□□□ 0.42
COL9A1-204ENST00000370496 C16orf86Q6ZW13 317 aa17.69■□□□□ 0.42
COL9A1-204ENST00000370496 STK11IPQ8N1F8 1099 aa17.69■□□□□ 0.42
COL9A1-204ENST00000370496 ZHX2Q9Y6X8 837 aa17.69■□□□□ 0.42
COL9A1-204ENST00000370496 ZMYM6O95789 1325 aa17.69■□□□□ 0.42
COL9A1-204ENST00000370496 MPHOSPH10O00566 681 aaKnown RBP17.68■□□□□ 0.42
COL9A1-204ENST00000370496 FOXP2O15409 715 aa17.68■□□□□ 0.42
COL9A1-204ENST00000370496 SLC3A2P08195 630 aaKnown RBP17.68■□□□□ 0.42
COL9A1-204ENST00000370496 HSPD1P10809 573 aaKnown RBP17.68■□□□□ 0.42
COL9A1-204ENST00000370496 SNAPC2Q13487 334 aa17.68■□□□□ 0.42
COL9A1-204ENST00000370496 ABCB5Q2M3G0 1257 aa17.68■□□□□ 0.42
COL9A1-204ENST00000370496 CCDC84Q86UT8 332 aaPredicted RBP17.68■□□□□ 0.42
COL9A1-204ENST00000370496 AS3MTQ9HBK9 375 aa17.68■□□□□ 0.42
COL9A1-204ENST00000370496 GINM1Q9NU53 330 aa17.68■□□□□ 0.42
COL9A1-204ENST00000370496 LOC285556D6RIA3 1793 aa17.68■□□□□ 0.42
COL9A1-204ENST00000370496 CCL15-CCL14A0A0B4J2E2 113 aa17.67■□□□□ 0.42
COL9A1-204ENST00000370496 SMIM22K7EJ46 135 aa17.67■□□□□ 0.42
COL9A1-204ENST00000370496 GH2P01242 217 aa17.67■□□□□ 0.42
COL9A1-204ENST00000370496 HSPA1AP0DMV8 641 aaKnown RBP17.67■□□□□ 0.42
COL9A1-204ENST00000370496 HSPA1BP0DMV9 641 aaKnown RBP17.67■□□□□ 0.42
COL9A1-204ENST00000370496 CDK8P49336 464 aa17.67■□□□□ 0.42
COL9A1-204ENST00000370496 PPARAQ07869 468 aa17.67■□□□□ 0.42
COL9A1-204ENST00000370496 CCL15Q16663 113 aa17.67■□□□□ 0.42
COL9A1-204ENST00000370496 SHROOM1Q2M3G4 852 aaPredicted RBP17.67■□□□□ 0.42
COL9A1-204ENST00000370496 TBC1D2Q9BYX2 928 aa17.67■□□□□ 0.42
COL9A1-204ENST00000370496 ZNF287Q9HBT7 754 aa17.67■□□□□ 0.42
COL9A1-204ENST00000370496 CABP5Q9NP86 173 aa17.67■□□□□ 0.42
COL9A1-204ENST00000370496 TRIM75PA6NK02 468 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 USP17L5A8MUK1 530 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 CETPP11597 493 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 RAB3GAP1Q15042 981 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 CASC1Q6TDU7 716 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 MKNK2Q9HBH9 465 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 INHBEP58166 350 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 IL25Q9H293 177 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 WBP1LQ9NX94 342 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 KCNH4Q9UQ05 1017 aa17.66■□□□□ 0.42
COL9A1-204ENST00000370496 GREB1LQ9C091 1923 aaPredicted RBP17.65■□□□□ 0.42
COL9A1-204ENST00000370496 CA12O43570 354 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 CDC45O75419 566 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 JAG1P78504 1218 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 PDE4BQ07343 736 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 ALX1Q15699 326 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 ZNF280CQ8ND82 737 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 BRI3BPQ8WY22 251 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 MS4A4AQ96JQ5 239 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 FEZ1Q99689 392 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 DSCC1Q9BVC3 393 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 AFG3L2Q9Y4W6 797 aa17.65■□□□□ 0.42
COL9A1-204ENST00000370496 CXCL11O14625 94 aa17.64■□□□□ 0.41
COL9A1-204ENST00000370496 SGSM2O43147 1006 aa17.64■□□□□ 0.41
COL9A1-204ENST00000370496 FGAP02671 866 aa17.64■□□□□ 0.41
COL9A1-204ENST00000370496 AKR1B1P15121 316 aa17.64■□□□□ 0.41
COL9A1-204ENST00000370496 TM4SF4P48230 202 aa17.64■□□□□ 0.41
COL9A1-204ENST00000370496 OTUD7BQ6GQQ9 843 aa17.64■□□□□ 0.41
COL9A1-204ENST00000370496 TMEM179Q6ZVK1 233 aa17.64■□□□□ 0.41
COL9A1-204ENST00000370496 IFNL1Q8IU54 200 aa17.64■□□□□ 0.41
COL9A1-204ENST00000370496 CCDC17Q96LX7 622 aa17.64■□□□□ 0.41
COL9A1-204ENST00000370496 A0A0G2JLL6 359 aaPredicted RBP17.63■□□□□ 0.41
COL9A1-204ENST00000370496 IGF2BP3O00425 579 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL9A1-204ENST00000370496 PRDM1O75626 825 aa17.63■□□□□ 0.41
COL9A1-204ENST00000370496 ALDH1A1P00352 501 aa17.63■□□□□ 0.41
COL9A1-204ENST00000370496 HAND2P61296 217 aa17.63■□□□□ 0.41
COL9A1-204ENST00000370496 CTDSPL2Q05D32 466 aa17.63■□□□□ 0.41
COL9A1-204ENST00000370496 SPP2Q13103 211 aa17.63■□□□□ 0.41
COL9A1-204ENST00000370496 MTMR2Q13614 643 aa17.63■□□□□ 0.41
COL9A1-204ENST00000370496 GADL1Q6ZQY3 521 aa17.63■□□□□ 0.41
COL9A1-204ENST00000370496 PRRT2Q7Z6L0 340 aaPredicted RBP17.63■□□□□ 0.41
COL9A1-204ENST00000370496 SAGE1Q9NXZ1 904 aa17.63■□□□□ 0.41
COL9A1-204ENST00000370496 TESPA1A2RU30 521 aaPredicted RBP17.62■□□□□ 0.41
COL9A1-204ENST00000370496 TRPA1O75762 1119 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 RASA1P20936 1047 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 ICA1Q05084 483 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 SEPT2Q15019 361 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 KIAA1211Q6ZU35 1233 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 ESYT1Q9BSJ8 1104 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 WDR18Q9BV38 432 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 RNF186Q9NXI6 227 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 CTNNA3Q9UI47 895 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 TSKSQ9UJT2 592 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 ANAPC4Q9UJX5 808 aa17.62■□□□□ 0.41
COL9A1-204ENST00000370496 FOXN1O15353 648 aa17.61■□□□□ 0.41
COL9A1-204ENST00000370496 HMGCS2P54868 508 aa17.61■□□□□ 0.41
COL9A1-204ENST00000370496 IMMTQ16891 758 aaKnown RBP17.61■□□□□ 0.41
COL9A1-204ENST00000370496 FASTKD5Q7L8L6 764 aaKnown RBP17.61■□□□□ 0.41
COL9A1-204ENST00000370496 ZNF444Q8N0Y2 327 aaPredicted RBP17.61■□□□□ 0.41
COL9A1-204ENST00000370496 BTBD19C9JJ37 291 aa17.6■□□□□ 0.41
COL9A1-204ENST00000370496 USP17L10C9JJH3 530 aa17.6■□□□□ 0.41
COL9A1-204ENST00000370496 ZNF213O14771 459 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms