RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SMAP1Q8IYB5 467 aaPredicted RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 TRIM47Q96LD4 638 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 RCOR1Q9UKL0 485 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 VWA3AA6NCI4 1184 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 SPDYE3A6NKU9 549 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 TRIM37O94972 964 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 FMNL1O95466 1100 aaPredicted RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 SYCP1Q15431 976 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 ZNF174Q15697 407 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 PIK3AP1Q6ZUJ8 805 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 PNMA1Q8ND90 353 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 SMARCC2Q8TAQ2 1214 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 NUP88Q99567 741 aaPredicted RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 FOXP1Q9H334 677 aaPredicted RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 TTF2Q9UNY4 1162 aaKnown RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 PAXBP1Q9Y5B6 917 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 BICDL2A1A5D9 508 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 PPEF1O14829 653 aaPredicted RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 KCNQ2O43526 872 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 KIF5CO60282 957 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 SKILP12757 684 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 LMOD1P29536 600 aaPredicted RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 BTDP43251 543 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 KCNQ4P56696 695 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 NLRP12P59046 1061 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 NONOQ15233 471 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 SPA17Q15506 151 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 IQCEQ6IPM2 695 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 KIAA1328Q86T90 577 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 STAG1Q8WVM7 1258 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 C16orf45Q96MC5 204 aaPredicted RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 CBX8Q9HC52 389 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 KCNJ14Q9UNX9 436 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 CNTNAP4Q9C0A0 1308 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 ZNF609O15014 1411 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 CACNA1FO60840 1977 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 LIG1P18858 919 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 BAG6P46379 1132 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 ASIC1P78348 528 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 FAM47AQ5JRC9 791 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 TBC1D9BQ66K14 1250 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 USP40Q9NVE5 1235 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 ZSWIM5Q9P217 1185 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 CGNQ9P2M7 1197 aaKnown RBP6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 TOPAZ1Q8N9V7 1692 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 KDM4FA0A1W2PPD8 638 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 PPP6R2O75170 966 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 SCG2P13521 617 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 RESTQ13127 1097 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 SLC39A14Q15043 492 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 WWC2Q6AWC2 1192 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 CACNA2D4Q7Z3S7 1137 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 ARHGEF1Q92888 912 aaKnown RBP6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 ARHGEF10LQ9HCE6 1279 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 VPS54Q9P1Q0 977 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 KIAA1468Q9P260 1216 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 PNPLA7Q6ZV29 1317 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 CHD2O14647 1828 aaKnown RBP6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 ERICH4A6NGS2 130 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 RGL2O15211 777 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 POLR2DO15514 142 aaKnown RBP6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 NR1I2O75469 434 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 TRAPPC10P48553 1259 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 HSP90B2PQ58FF3 399 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 CT47A1Q5JQC4 288 aaPredicted RBP6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 FAM182BQ5T319 152 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 MCTP2Q6DN12 878 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 C2CD5Q86YS7 1000 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 FAM177A1Q8N128 213 aaPredicted RBP6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 VEZTQ9HBM0 779 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 PCDHA7Q9UN72 937 aa6.02□□□□□ -1.45
SMNDC1-202ENST00000369603 PRKAB2O43741 272 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 ZNF500O60304 480 aaPredicted RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 PFKFB1P16118 471 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 ADCY7P51828 1080 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 RBM6P78332 1123 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 MECOMQ03112 1051 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 SNW1Q13573 536 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 LETM2Q2VYF4 491 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 CCDC40Q4G0X9 1142 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 RBM26Q5T8P6 1007 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 TAF3Q5VWG9 929 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 CC2D2BQ6DHV5 1058 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 VPS36Q86VN1 386 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 MB21D2Q8IYB1 491 aaPredicted RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 UBXN4Q92575 508 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 KCNB2Q92953 911 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 CCDC17Q96LX7 622 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 PEAK1Q9H792 1746 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 IFNKQ9P0W0 207 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 STK24Q9Y6E0 443 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 DTNBO60941 627 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 TBCAO75347 108 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 ERLIN1O75477 346 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 NPR1P16066 1061 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 RXRBP28702 533 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 DYNLL1P63167 89 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 KIF23Q02241 960 aaPredicted RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 POSTNQ15063 836 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 BLIDQ8IZY5 108 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 410.9 ms