RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CROCCP2Q86T23 111 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 GCNT3O95395 438 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 GKAP1Q5VSY0 366 aaPredicted RBP17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 C8orf74Q6P047 294 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 CASC4Q6P4E1 433 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 HDXQ7Z353 690 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 CCDC89Q8N998 374 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 DEPTORQ8TB45 409 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 APPBP2Q92624 585 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 EYA1Q99502 592 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 CLSTN2Q9H4D0 955 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 DCTPP1Q9H773 170 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 POLKQ9UBT6 870 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 MROH5Q6ZUA9 1318 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 SYT10Q6XYQ8 523 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 MRPL44Q9H9J2 332 aaKnown RBP17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 TTF2Q9UNY4 1162 aaKnown RBP17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 HSPA2P54652 639 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 YARSP54577 528 aaKnown RBP17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 SLC9C1Q4G0N8 1177 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 SYCE1Q8N0S2 351 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 MAIP1Q8WWC4 291 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 LPIN2Q92539 896 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 VPS16Q9H269 839 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 A2MP01023 1474 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 HERC4Q5GLZ8 1057 aaPredicted RBP17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 UTP14CQ5TAP6 766 aaKnown RBP17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 I3L4J1 428 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 CASQ2O14958 399 aaPredicted RBP17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 CEP57Q86XR8 500 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 ASIC3Q9UHC3 531 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 A0A1B0GVL5 298 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 CHMLP26374 656 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 ANO1Q5XXA6 986 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 RSPH3Q86UC2 560 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 INTS4Q96HW7 963 aaKnown RBP17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 NAPGQ99747 312 aaPredicted RBP17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 NCAPGQ9BPX3 1015 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 KCNH3Q9ULD8 1083 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 PLCB4Q15147 1175 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 CHURC1Q8WUH1 139 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 VCX3BQ9H321 246 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 ATP11AP98196 1134 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 ANGEL1Q9UNK9 670 aaKnown RBP17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 TRPC6Q9Y210 931 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 DUOX2Q9NRD8 1548 aa17.43■□□□□ 0.38
NUCKS1-201ENST00000367142 TUBB2AQ13885 445 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 MUM1L1Q5H9M0 696 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 SND1Q7KZF4 910 aaKnown RBP eCLIP17.42■□□□□ 0.381e-14■□□□□ 10.4
NUCKS1-201ENST00000367142 PAGR1Q9BTK6 254 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 TUBB2BQ9BVA1 445 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 IBTKQ9P2D0 1353 aaPredicted RBP17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 ARHGEF6Q15052 776 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 NUF2Q9BZD4 464 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 FAM98CQ17RN3 349 aaKnown RBP17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 ZNF790Q6PG37 636 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 MIER3Q7Z3K6 550 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 ZBTB8OSQ8IWT0 167 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 CUTAO60888 179 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 SARNPP82979 210 aaKnown RBP17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 ARHGEF16Q5VV41 709 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 CACNA2D3Q8IZS8 1091 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 LLPHQ9BRT6 129 aaKnown RBP17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 HHATQ5VTY9 493 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 SECISBP2LQ93073 1101 aaKnown RBP17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 IWS1Q96ST2 819 aa17.42■□□□□ 0.38
NUCKS1-201ENST00000367142 TNNI1P19237 187 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 MAPKAPK5Q8IW41 473 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 METTL13Q8N6R0 699 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 RNF169Q8NCN4 708 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 TTC36A6NLP5 189 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 DCAF15Q66K64 600 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 RTEL1Q9NZ71 1219 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 WDR46O15213 610 aaKnown RBP17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 GPAA1O43292 621 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 SPATA5Q8NB90 893 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 BABAM1Q9NWV8 329 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 PRDM1O75626 825 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 CCDC62Q6P9F0 684 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 IFT20Q8IY31 132 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 TGFBRAP1Q8WUH2 860 aa17.41■□□□□ 0.38
NUCKS1-201ENST00000367142 USP21Q9UK80 565 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 FLOT1O75955 427 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 VCXQ9H320 206 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 BCS1LQ9Y276 419 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 SPDYE16A6NNV3 312 aaPredicted RBP17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 SPDYE2Q495Y8 402 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 CABP7Q86V35 215 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 FLAD1Q8NFF5 587 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 NT5C3AQ9H0P0 336 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 USP40Q9NVE5 1235 aa17.4■□□□□ 0.38
NUCKS1-201ENST00000367142 PCDHB15Q9Y5E8 787 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms