RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 MIPEPQ99797 713 aa7.83□□□□□ -1.16
RNU4-28P-201ENST00000364739 CCDC39Q9UFE4 941 aa7.83□□□□□ -1.16
RNU4-28P-201ENST00000364739 UNCXA6NJT0 531 aa7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 BPNT1O95861 308 aa7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 TAL1P17542 331 aaPredicted RBP7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 ITIH2P19823 946 aa7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 BNIP3Q12983 259 aa7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 CCDC84Q86UT8 332 aaPredicted RBP7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 ZNF296Q8WUU4 475 aaPredicted RBP7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 ACSF2Q96CM8 615 aaPredicted RBP7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 BCL11AQ9H165 835 aa7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 ADAMTS1Q9UHI8 967 aa7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 PLAGL2Q9UPG8 496 aa7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 POLR3KQ9Y2Y1 108 aaPredicted RBP7.82□□□□□ -1.16
RNU4-28P-201ENST00000364739 WNT11O96014 354 aa7.81□□□□□ -1.16
RNU4-28P-201ENST00000364739 PLCG1P19174 1290 aa7.81□□□□□ -1.16
RNU4-28P-201ENST00000364739 CD96P40200 585 aa7.81□□□□□ -1.16
RNU4-28P-201ENST00000364739 OXCT1P55809 520 aa7.81□□□□□ -1.16
RNU4-28P-201ENST00000364739 NFXL1Q6ZNB6 911 aa7.81□□□□□ -1.16
RNU4-28P-201ENST00000364739 ARHGAP27Q6ZUM4 889 aa7.81□□□□□ -1.16
RNU4-28P-201ENST00000364739 TMEM87BQ96K49 555 aa7.81□□□□□ -1.16
RNU4-28P-201ENST00000364739 RECKO95980 971 aa7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 CST3P01034 146 aaPredicted RBP7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 ZNF76P36508 570 aa7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 CRKP46108 304 aa7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 ZNF394Q53GI3 561 aa7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 FAM196AQ6ZSG2 479 aa7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 CDH24Q86UP0 819 aa7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 MRRFQ96E11 262 aaKnown RBP7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 BSDC1Q9NW68 430 aaPredicted RBP7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 UBP1Q9NZI7 540 aa7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 PCDHGB7Q9Y5F8 929 aa7.8□□□□□ -1.16
RNU4-28P-201ENST00000364739 PRR33A8MZF0 331 aa7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 GREM1O60565 184 aa7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 FANCCQ00597 558 aa7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 PDE4BQ07343 736 aa7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 LETMD1Q6P1Q0 360 aa7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 ZNF574Q6ZN55 896 aaPredicted RBP7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 SPRED2Q7Z698 418 aa7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 MCATQ8IVS2 390 aaKnown RBP7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 NETO1Q8TDF5 533 aa7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 KIAA1522Q9P206 1035 aaPredicted RBP7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 TPX2Q9ULW0 747 aaKnown RBP7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 ANGEL1Q9UNK9 670 aaKnown RBP7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 TACC3Q9Y6A5 838 aa7.79□□□□□ -1.16
RNU4-28P-201ENST00000364739 CHURC1-FNTBB4DL54 471 aa7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 CAP2P40123 477 aa7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 C9orf131Q5VYM1 1079 aa7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 REC114Q7Z4M0 266 aa7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 MRPL41Q8IXM3 137 aaKnown RBP7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 MFSD2AQ8NA29 543 aa7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 ZNF428Q96B54 188 aa7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 BRMS1Q9HCU9 246 aa7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 REV1Q9UBZ9 1251 aa7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 RNF114Q9Y508 228 aa7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 SUPT16HQ9Y5B9 1047 aaKnown RBP7.78□□□□□ -1.16
RNU4-28P-201ENST00000364739 DNAJA2O60884 412 aa7.77□□□□□ -1.17
RNU4-28P-201ENST00000364739 PRNPP04156 253 aa7.77□□□□□ -1.17
RNU4-28P-201ENST00000364739 CEACAM5P06731 702 aa7.77□□□□□ -1.17
RNU4-28P-201ENST00000364739 MPP2Q14168 576 aa7.77□□□□□ -1.17
RNU4-28P-201ENST00000364739 SLC6A19Q695T7 634 aa7.77□□□□□ -1.17
RNU4-28P-201ENST00000364739 BCL7CQ8WUZ0 217 aaPredicted RBP7.77□□□□□ -1.17
RNU4-28P-201ENST00000364739 PRDM5Q9NQX1 630 aaPredicted RBP7.77□□□□□ -1.17
RNU4-28P-201ENST00000364739 KLHL3Q9UH77 587 aa7.77□□□□□ -1.17
RNU4-28P-201ENST00000364739 GTF2IRD1Q9UHL9 959 aa7.77□□□□□ -1.17
RNU4-28P-201ENST00000364739 HTR3BO95264 441 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 CBX7O95931 251 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 NKPD1Q17RQ9 610 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 SEZ6Q53EL9 994 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 DIEXFQ68CQ4 756 aaKnown RBP7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 USP48Q86UV5 1035 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 TP53INP2Q8IXH6 220 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 FAM13CQ8NE31 585 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 FLCNQ8NFG4 579 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 EAF1Q96JC9 268 aaPredicted RBP7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 KCNQ5Q9NR82 932 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 ADAM30Q9UKF2 790 aa7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 CCDC9Q9Y3X0 531 aaKnown RBP7.76□□□□□ -1.17
RNU4-28P-201ENST00000364739 RACK1P63244 317 aaKnown RBP7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 IFI16Q16666 785 aaKnown RBP7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 AOC3Q16853 763 aa7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 VSIG10LQ86VR7 867 aa7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 WFDC3Q8IUB2 231 aa7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 ABI1Q8IZP0 508 aa7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 RNF34Q969K3 372 aa7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 SPON2Q9BUD6 331 aa7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 PAK6Q9NQU5 681 aaPredicted RBP7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 SLC5A6Q9Y289 635 aa7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 PCDHB14Q9Y5E9 798 aa7.75□□□□□ -1.17
RNU4-28P-201ENST00000364739 GNAT3A8MTJ3 354 aa7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 IGF2BP3O00425 579 aaKnown RBP eCLIP7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 CD8BP10966 210 aa7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 MCM4P33991 863 aa7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 CWF19L2Q2TBE0 894 aaKnown RBP7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 TMEM201Q5SNT2 666 aa7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 SFRP5Q5T4F7 317 aa7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 CDKAL1Q5VV42 579 aa7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 SPACA3Q8IXA5 215 aa7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 PPP1R13LQ8WUF5 828 aa7.74□□□□□ -1.17
RNU4-28P-201ENST00000364739 MKNK2Q9HBH9 465 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms