RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 CDK8P49336 464 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 CCDC85BQ15834 202 aaPredicted RBP4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 MLANAQ16655 118 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 PRAMEF13Q5VWM6 474 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 ZNF746Q6NUN9 644 aaPredicted RBP4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 LETMD1Q6P1Q0 360 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 C22orf34Q6ZV56 151 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 HID1Q8IV36 788 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 MFSD2AQ8NA29 543 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 LIN37Q96GY3 246 aaPredicted RBP4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 SEMA3GQ9NS98 782 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 LMCD1Q9NZU5 365 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 SNCAIPQ9Y6H5 919 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 CAPN6Q9Y6Q1 641 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 GRK4P32298 578 aa4.59□□□□□ -1.67
RNU4-42P-201ENST00000364738 MESP2Q0VG99 397 aa4.59□□□□□ -1.67
RNU4-42P-201ENST00000364738 SEPT6Q14141 434 aa4.59□□□□□ -1.67
RNU4-42P-201ENST00000364738 FYB2Q5VWT5 728 aa4.59□□□□□ -1.67
RNU4-42P-201ENST00000364738 MPZL3Q6UWV2 235 aa4.59□□□□□ -1.67
RNU4-42P-201ENST00000364738 XAGE3Q8WTP9 111 aa4.59□□□□□ -1.67
RNU4-42P-201ENST00000364738 KIRREL1Q96J84 757 aa4.59□□□□□ -1.67
RNU4-42P-201ENST00000364738 FAM84AQ96KN4 292 aa4.59□□□□□ -1.67
RNU4-42P-201ENST00000364738 CNTNAP4Q9C0A0 1308 aa4.59□□□□□ -1.67
RNU4-42P-201ENST00000364738 PRPF40AO75400 957 aaKnown RBP4.58□□□□□ -1.68
RNU4-42P-201ENST00000364738 CBX7O95931 251 aa4.58□□□□□ -1.68
RNU4-42P-201ENST00000364738 CST3P01034 146 aaPredicted RBP4.58□□□□□ -1.68
RNU4-42P-201ENST00000364738 RPS26P62854 115 aaKnown RBP4.58□□□□□ -1.68
RNU4-42P-201ENST00000364738 THAP5Q7Z6K1 395 aa4.58□□□□□ -1.68
RNU4-42P-201ENST00000364738 NPAS4Q8IUM7 802 aa4.58□□□□□ -1.68
RNU4-42P-201ENST00000364738 RIN3Q8TB24 985 aa4.58□□□□□ -1.68
RNU4-42P-201ENST00000364738 TIMELESSQ9UNS1 1208 aa4.58□□□□□ -1.68
RNU4-42P-201ENST00000364738 ST14Q9Y5Y6 855 aa4.58□□□□□ -1.68
RNU4-42P-201ENST00000364738 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 GLI1P08151 1106 aa4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 CYP7A1P22680 504 aa4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 MAP3K11Q16584 847 aa4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 TMEM67Q5HYA8 995 aa4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 BHLHE22Q8NFJ8 381 aaPredicted RBP4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 DPH2Q9BQC3 489 aaPredicted RBP4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 MIR1-1HGQ9H1L0 117 aa4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 C19orf73Q9NVV2 129 aa4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 PCDHB5Q9Y5E4 795 aa4.57□□□□□ -1.68
RNU4-42P-201ENST00000364738 GFRA2O00451 464 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 PGRP06401 933 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 GDNFP39905 211 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 KIR3DL1P43629 444 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 LIG3P49916 1009 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 SPOCD1Q6ZMY3 1216 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 AGMOQ6ZNB7 445 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 PRR23BQ6ZRT6 265 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 CDH24Q86UP0 819 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 MRPL41Q8IXM3 137 aaKnown RBP4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 UBE2FQ969M7 185 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 CCDC120Q96HB5 630 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 COX4I2Q96KJ9 171 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 ALPK1Q96QP1 1244 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 PPP1R16BQ96T49 567 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 DUSP9Q99956 384 aaKnown RBP4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 SLAMF8Q9P0V8 285 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 ZSWIM5Q9P217 1185 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 TACC3Q9Y6A5 838 aa4.56□□□□□ -1.68
RNU4-42P-201ENST00000364738 TSPAN15O95858 294 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 RAC2P15153 192 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 ETV3P41162 512 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 RAP1GAPP47736 663 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 TNK2Q07912 1038 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 MEI1Q5TIA1 1274 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 TMEM87BQ96K49 555 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 TJP2Q9UDY2 1190 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 AK5Q9Y6K8 562 aa4.55□□□□□ -1.68
RNU4-42P-201ENST00000364738 PATL2C9JE40 543 aaKnown RBP4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 PDE4BQ07343 736 aa4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 EAPPQ56P03 285 aaPredicted RBP4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 SYDE1Q6ZW31 735 aaPredicted RBP4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 TMPRSS7Q7RTY8 843 aa4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 TTC6Q86TZ1 520 aa4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 PIWIL2Q8TC59 973 aaKnown RBP4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 TOX2Q96NM4 488 aa4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 DIRC2Q96SL1 478 aa4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 NSUN3Q9H649 340 aaKnown RBP4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 RNF19AQ9NV58 838 aa4.54□□□□□ -1.68
RNU4-42P-201ENST00000364738 ANKRD33BA6NCL7 494 aa4.53□□□□□ -1.68
RNU4-42P-201ENST00000364738 RBAK-RBAKDNI3L0D1 243 aa4.53□□□□□ -1.68
RNU4-42P-201ENST00000364738 TFE3P19532 575 aaPredicted RBP4.53□□□□□ -1.68
RNU4-42P-201ENST00000364738 TSNAXIP1Q2TAA8 658 aa4.53□□□□□ -1.68
RNU4-42P-201ENST00000364738 FBLN7Q53RD9 439 aa4.53□□□□□ -1.68
RNU4-42P-201ENST00000364738 DIEXFQ68CQ4 756 aaKnown RBP4.53□□□□□ -1.68
RNU4-42P-201ENST00000364738 SLC6A19Q695T7 634 aa4.53□□□□□ -1.68
RNU4-42P-201ENST00000364738 ABHD4Q8TB40 342 aa4.53□□□□□ -1.68
RNU4-42P-201ENST00000364738 JARID2Q92833 1246 aaPredicted RBP4.53□□□□□ -1.68
RNU4-42P-201ENST00000364738 DNAJC25-GNG10A0A024R161 153 aa4.52□□□□□ -1.69
RNU4-42P-201ENST00000364738 ESR1P03372 595 aa4.52□□□□□ -1.69
RNU4-42P-201ENST00000364738 RLBP1P12271 317 aa4.52□□□□□ -1.69
RNU4-42P-201ENST00000364738 HK2P52789 917 aa4.52□□□□□ -1.69
RNU4-42P-201ENST00000364738 RPL6Q02878 288 aaKnown RBP4.52□□□□□ -1.69
RNU4-42P-201ENST00000364738 RALGPS1Q5JS13 557 aa4.52□□□□□ -1.69
RNU4-42P-201ENST00000364738 CREG2Q8IUH2 290 aa4.52□□□□□ -1.69
RNU4-42P-201ENST00000364738 CILP2Q8IUL8 1156 aa4.52□□□□□ -1.69
RNU4-42P-201ENST00000364738 MCATQ8IVS2 390 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms