RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 HOXA7P31268 230 aaPredicted RBP18.43■□□□□ 0.54
GDPD3-201ENST00000360688 ZAP70P43403 619 aa18.43■□□□□ 0.54
GDPD3-201ENST00000360688 IRX3P78415 501 aaPredicted RBP18.43■□□□□ 0.54
GDPD3-201ENST00000360688 SHROOM1Q2M3G4 852 aaPredicted RBP18.43■□□□□ 0.54
GDPD3-201ENST00000360688 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
GDPD3-201ENST00000360688 CRACR2BQ8N4Y2 399 aaPredicted RBP18.43■□□□□ 0.54
GDPD3-201ENST00000360688 PAWRQ96IZ0 340 aaKnown RBP18.43■□□□□ 0.54
GDPD3-201ENST00000360688 C1orf115Q9H7X2 142 aa18.43■□□□□ 0.54
GDPD3-201ENST00000360688 IGSF3O75054 1194 aa18.42■□□□□ 0.54
GDPD3-201ENST00000360688 GDF11O95390 407 aa18.42■□□□□ 0.54
GDPD3-201ENST00000360688 DIS3LQ8TF46 1054 aaKnown RBP18.42■□□□□ 0.54
GDPD3-201ENST00000360688 P2RX7Q99572 595 aaKnown RBP18.42■□□□□ 0.54
GDPD3-201ENST00000360688 PIH1D3Q9NQM4 214 aaKnown RBP18.42■□□□□ 0.54
GDPD3-201ENST00000360688 GINM1Q9NU53 330 aa18.42■□□□□ 0.54
GDPD3-201ENST00000360688 TMOD4Q9NZQ9 345 aa18.42■□□□□ 0.54
GDPD3-201ENST00000360688 DBNLQ9UJU6 430 aaKnown RBP18.42■□□□□ 0.54
GDPD3-201ENST00000360688 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
GDPD3-201ENST00000360688 C19orf81C9J6K1 198 aa18.41■□□□□ 0.54
GDPD3-201ENST00000360688 USP17L10C9JJH3 530 aa18.41■□□□□ 0.54
GDPD3-201ENST00000360688 PEX10O60683 326 aa18.41■□□□□ 0.54
GDPD3-201ENST00000360688 DYNLL1P63167 89 aaKnown RBP18.41■□□□□ 0.54
GDPD3-201ENST00000360688 TRIM32Q13049 653 aa18.41■□□□□ 0.54
GDPD3-201ENST00000360688 NECAB2Q7Z6G3 386 aa18.41■□□□□ 0.54
GDPD3-201ENST00000360688 TRIM34Q9BYJ4 488 aa18.41■□□□□ 0.54
GDPD3-201ENST00000360688 HMX1Q9NP08 348 aaPredicted RBP18.41■□□□□ 0.54
GDPD3-201ENST00000360688 TLR7Q9NYK1 1049 aaKnown RBP18.41■□□□□ 0.54
GDPD3-201ENST00000360688 SAP30BPQ9UHR5 308 aaKnown RBP18.41■□□□□ 0.54
GDPD3-201ENST00000360688 ZBTB21Q9ULJ3 1066 aa18.41■□□□□ 0.54
GDPD3-201ENST00000360688 RPTORQ8N122 1335 aa18.41■□□□□ 0.54
GDPD3-201ENST00000360688 LAMA3Q16787 3333 aa18.4■□□□□ 0.54
GDPD3-201ENST00000360688 HERVK_113P62684 666 aa18.4■□□□□ 0.54
GDPD3-201ENST00000360688 ANKLE1Q8NAG6 615 aa18.4■□□□□ 0.54
GDPD3-201ENST00000360688 TRIB2Q92519 343 aa18.4■□□□□ 0.54
GDPD3-201ENST00000360688 TXNRD2Q9NNW7 524 aa18.4■□□□□ 0.54
GDPD3-201ENST00000360688 DDX60LQ5H9U9 1706 aaKnown RBP18.39■□□□□ 0.53
GDPD3-201ENST00000360688 HLA-DOAP06340 250 aa18.39■□□□□ 0.53
GDPD3-201ENST00000360688 CYP2B6P20813 491 aa18.39■□□□□ 0.53
GDPD3-201ENST00000360688 CYP7A1P22680 504 aa18.39■□□□□ 0.53
GDPD3-201ENST00000360688 GPRC5AQ8NFJ5 357 aa18.39■□□□□ 0.53
GDPD3-201ENST00000360688 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
GDPD3-201ENST00000360688 CCDC8Q9H0W5 538 aaPredicted RBP18.39■□□□□ 0.53
GDPD3-201ENST00000360688 RBPJLQ9UBG7 517 aa18.39■□□□□ 0.53
GDPD3-201ENST00000360688 A0A1W2PPC1 479 aa18.38■□□□□ 0.53
GDPD3-201ENST00000360688 RLBP1P12271 317 aa18.38■□□□□ 0.53
GDPD3-201ENST00000360688 FTSJ3Q8IY81 847 aaKnown RBP18.38■□□□□ 0.53
GDPD3-201ENST00000360688 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
GDPD3-201ENST00000360688 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
GDPD3-201ENST00000360688 MNX1P50219 401 aaPredicted RBP18.37■□□□□ 0.53
GDPD3-201ENST00000360688 Q3C1V9 767 aa18.37■□□□□ 0.53
GDPD3-201ENST00000360688 MAP3K21Q5TCX8 1036 aa18.37■□□□□ 0.53
GDPD3-201ENST00000360688 ITPRIPQ8IWB1 547 aa18.37■□□□□ 0.53
GDPD3-201ENST00000360688 MIER1Q8N108 512 aa18.37■□□□□ 0.53
GDPD3-201ENST00000360688 MIGA1Q8NAN2 632 aa18.37■□□□□ 0.53
GDPD3-201ENST00000360688 SOCS4Q8WXH5 440 aa18.37■□□□□ 0.53
GDPD3-201ENST00000360688 NUDT12Q9BQG2 462 aa18.37■□□□□ 0.53
GDPD3-201ENST00000360688 STAP2Q9UGK3 403 aa18.37■□□□□ 0.53
GDPD3-201ENST00000360688 GH2P01242 217 aa18.36■□□□□ 0.53
GDPD3-201ENST00000360688 XRCC5P13010 732 aaKnown RBP18.36■□□□□ 0.53
GDPD3-201ENST00000360688 MAPK4P31152 587 aa18.36■□□□□ 0.53
GDPD3-201ENST00000360688 TATDN1Q6P1N9 297 aa18.36■□□□□ 0.53
GDPD3-201ENST00000360688 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
GDPD3-201ENST00000360688 POTEEQ6S8J3 1075 aa18.36■□□□□ 0.53
GDPD3-201ENST00000360688 NBPF3Q9H094 633 aa18.36■□□□□ 0.53
GDPD3-201ENST00000360688 OGDHLQ9ULD0 1010 aa18.36■□□□□ 0.53
GDPD3-201ENST00000360688 NDUFB9Q9Y6M9 179 aa18.36■□□□□ 0.53
GDPD3-201ENST00000360688 DNAH12Q6ZR08 3092 aa18.36■□□□□ 0.53
GDPD3-201ENST00000360688 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
GDPD3-201ENST00000360688 ERVK-9P63128 1117 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 ERVK-24P63145 666 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 C7orf61Q8IZ16 206 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 MAGEB6Q8N7X4 407 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 GTF3C2Q8WUA4 911 aaPredicted RBP18.35■□□□□ 0.53
GDPD3-201ENST00000360688 USP6NLQ92738 828 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 PAGR1Q9BTK6 254 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 PORCNQ9H237 461 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 ANTXR1Q9H6X2 564 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 COL6A3P12111 3177 aa18.35■□□□□ 0.53
GDPD3-201ENST00000360688 USP5P45974 858 aa18.34■□□□□ 0.53
GDPD3-201ENST00000360688 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
GDPD3-201ENST00000360688 CEP85Q6P2H3 762 aa18.34■□□□□ 0.53
GDPD3-201ENST00000360688 C12orf42Q96LP6 360 aa18.34■□□□□ 0.53
GDPD3-201ENST00000360688 C11orf49Q9H6J7 331 aa18.34■□□□□ 0.53
GDPD3-201ENST00000360688 SERPINB13Q9UIV8 391 aa18.34■□□□□ 0.53
GDPD3-201ENST00000360688 SOX1O00570 391 aaPredicted RBP18.33■□□□□ 0.53
GDPD3-201ENST00000360688 ZKSCAN1P17029 563 aaPredicted RBP18.33■□□□□ 0.53
GDPD3-201ENST00000360688 ZYXQ15942 572 aaKnown RBP18.33■□□□□ 0.53
GDPD3-201ENST00000360688 MORN1Q5T089 497 aa18.33■□□□□ 0.53
GDPD3-201ENST00000360688 GPR142Q7Z601 462 aa18.33■□□□□ 0.53
GDPD3-201ENST00000360688 CCAR1Q8IX12 1150 aaKnown RBP18.33■□□□□ 0.53
GDPD3-201ENST00000360688 TRMT44Q8IYL2 757 aaKnown RBP18.33■□□□□ 0.53
GDPD3-201ENST00000360688 EHD4Q9H223 541 aa18.33■□□□□ 0.53
GDPD3-201ENST00000360688 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
GDPD3-201ENST00000360688 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
GDPD3-201ENST00000360688 MAP3K12Q12852 859 aa18.32■□□□□ 0.52
GDPD3-201ENST00000360688 CCL14Q16627 93 aa18.32■□□□□ 0.52
GDPD3-201ENST00000360688 PLEKHH3Q7Z736 793 aa18.32■□□□□ 0.52
GDPD3-201ENST00000360688 FEZ1Q99689 392 aa18.32■□□□□ 0.52
GDPD3-201ENST00000360688 GDF15Q99988 308 aa18.32■□□□□ 0.52
GDPD3-201ENST00000360688 ZMYND8Q9ULU4 1186 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms