RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 LETM2Q2VYF4 491 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 MRPL50Q8N5N7 158 aaKnown RBP10.72□□□□□ -0.69
CUX1-203ENST00000360264 RUNDC3BQ96NL0 473 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 UAP1Q16222 522 aaPredicted RBP10.72□□□□□ -0.69
CUX1-203ENST00000360264 CEP85Q6P2H3 762 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 DEPTORQ8TB45 409 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 NMIQ13287 307 aaPredicted RBP10.72□□□□□ -0.69
CUX1-203ENST00000360264 TRIML1Q8N9V2 468 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 RBSNQ9H1K0 784 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 CEP120Q8N960 986 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 IRX4P78413 519 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 CHRNA2Q15822 529 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 ADCY7P51828 1080 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 DMP1Q13316 513 aaPredicted RBP10.72□□□□□ -0.69
CUX1-203ENST00000360264 IFNKQ9P0W0 207 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 URB2Q14146 1524 aaKnown RBP10.72□□□□□ -0.69
CUX1-203ENST00000360264 H0YIN7 160 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 RNF216Q9NWF9 866 aaPredicted RBP10.72□□□□□ -0.69
CUX1-203ENST00000360264 PHBP35232 272 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 CCDC186Q7Z3E2 898 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 SMC5Q8IY18 1101 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 RAB17Q9H0T7 212 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 BICC1Q9H694 974 aaKnown RBP10.72□□□□□ -0.69
CUX1-203ENST00000360264 PTPDC1A2A3K4 754 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 HARSP12081 509 aaKnown RBP10.72□□□□□ -0.69
CUX1-203ENST00000360264 IFT81Q8WYA0 676 aa10.72□□□□□ -0.69
CUX1-203ENST00000360264 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.69
CUX1-203ENST00000360264 MYL5Q02045 173 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 HSP90AA4PQ58FG1 418 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 ZKSCAN5Q9Y2L8 839 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 RIMS2Q9UQ26 1411 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 PSDA5PKW4 1024 aaPredicted RBP10.71□□□□□ -0.69
CUX1-203ENST00000360264 SECISBP2LQ93073 1101 aaKnown RBP10.71□□□□□ -0.69
CUX1-203ENST00000360264 RPS6KA2Q15349 733 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 SLC17A8Q8NDX2 589 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 POLR2BP30876 1174 aaKnown RBP10.71□□□□□ -0.69
CUX1-203ENST00000360264 ZNF131P52739 623 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 TEX11Q8IYF3 940 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 FLAD1Q8NFF5 587 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 FAN1Q9Y2M0 1017 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 POSTNQ15063 836 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 ZBTB8OSQ8IWT0 167 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 CCDC170Q8IYT3 715 aa10.71□□□□□ -0.69
CUX1-203ENST00000360264 MBD4O95243 580 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 MCF2L2Q86YR7 1114 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 IMPACTQ9P2X3 320 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 POLR3AO14802 1390 aaPredicted RBP10.71□□□□□ -0.7
CUX1-203ENST00000360264 EIF3CLB5ME19 914 aaKnown RBP10.71□□□□□ -0.7
CUX1-203ENST00000360264 LARGE2Q8N3Y3 721 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 RPGRIP1Q96KN7 1286 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 EIF3CQ99613 913 aaKnown RBP10.71□□□□□ -0.7
CUX1-203ENST00000360264 KRT3P12035 628 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 PCK1P35558 622 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 GNPTABQ3T906 1256 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 CSGALNACT2Q8N6G5 542 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 MIGA1Q8NAN2 632 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 ZEB2O60315 1214 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 DPP8Q6V1X1 898 aaPredicted RBP10.71□□□□□ -0.7
CUX1-203ENST00000360264 OGFRQ9NZT2 677 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 RP1P56715 2156 aa10.71□□□□□ -0.7
CUX1-203ENST00000360264 TMOD1P28289 359 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 SEPT14Q6ZU15 432 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 NLRX1Q86UT6 975 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 GOLGA8QA0A0J9YX86 632 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 GOLGA8OA6NCC3 632 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 GOLGA8NF8WBI6 632 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 SP4Q02446 784 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 CFAP221Q4G0U5 840 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 IP6K1Q92551 441 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
CUX1-203ENST00000360264 KRT10P13645 584 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 LZTFL1Q9NQ48 299 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 PABPC4Q13310 644 aaKnown RBP eCLIP10.7□□□□□ -0.7
CUX1-203ENST00000360264 CCNL1Q9UK58 526 aaPredicted RBP10.7□□□□□ -0.7
CUX1-203ENST00000360264 GCNT3O95395 438 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 NFATC2IPQ8NCF5 419 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 RPS6KA1Q15418 735 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 TMTC1Q8IUR5 882 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 RAB20Q9NX57 234 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 CHMP2AO43633 222 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 ACSBG1Q96GR2 724 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 WDR46O15213 610 aaKnown RBP10.7□□□□□ -0.7
CUX1-203ENST00000360264 KRT81Q14533 505 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 SRGAP2BP0DMP2 458 aa10.7□□□□□ -0.7
CUX1-203ENST00000360264 HOXA7P31268 230 aaPredicted RBP10.7□□□□□ -0.7
CUX1-203ENST00000360264 ABCD1P33897 745 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 CSRNP1Q96S65 589 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 GBP7Q8N8V2 638 aaPredicted RBP10.69□□□□□ -0.7
CUX1-203ENST00000360264 TTC38Q5R3I4 469 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 SFMBT2Q5VUG0 894 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 PHLDB3Q6NSJ2 640 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 EXOC8Q8IYI6 725 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 STMN1P16949 149 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 HHATQ5VTY9 493 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 KRT26Q7Z3Y9 468 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 ERO1AQ96HE7 468 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 RPS6KB1P23443 525 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms