RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 MLKLQ8NB16 471 aa23.7■■□□□ 1.38
TRIM3-202ENST00000359518 TEX13AQ9BXU3 409 aaPredicted RBP23.7■■□□□ 1.38
TRIM3-202ENST00000359518 RAI14Q9P0K7 980 aa23.7■■□□□ 1.38
TRIM3-202ENST00000359518 HSPA2P54652 639 aa23.7■■□□□ 1.38
TRIM3-202ENST00000359518 RILPL1Q5EBL4 403 aa23.7■■□□□ 1.38
TRIM3-202ENST00000359518 CRACR2BQ8N4Y2 399 aaPredicted RBP23.7■■□□□ 1.38
TRIM3-202ENST00000359518 SDR42E1Q8WUS8 393 aa23.7■■□□□ 1.38
TRIM3-202ENST00000359518 STX10O60499 249 aa23.69■■□□□ 1.38
TRIM3-202ENST00000359518 SASH3O75995 380 aa23.69■■□□□ 1.38
TRIM3-202ENST00000359518 SART3Q15020 963 aaKnown RBP23.69■■□□□ 1.38
TRIM3-202ENST00000359518 ENOX1Q8TC92 643 aaKnown RBP23.69■■□□□ 1.38
TRIM3-202ENST00000359518 SLC4A9Q96Q91 983 aa23.69■■□□□ 1.38
TRIM3-202ENST00000359518 SRRTQ9BXP5 876 aaKnown RBP23.69■■□□□ 1.38
TRIM3-202ENST00000359518 A0A087X0B3 334 aa23.69■■□□□ 1.38
TRIM3-202ENST00000359518 EARS2Q5JPH6 523 aaKnown RBP23.69■■□□□ 1.38
TRIM3-202ENST00000359518 ZNF512BQ96KM6 892 aaPredicted RBP23.69■■□□□ 1.38
TRIM3-202ENST00000359518 TRERF1Q96PN7 1200 aa23.69■■□□□ 1.38
TRIM3-202ENST00000359518 MPHOSPH8Q99549 860 aa23.69■■□□□ 1.38
TRIM3-202ENST00000359518 CARD10Q9BWT7 1032 aa23.69■■□□□ 1.38
TRIM3-202ENST00000359518 KRT23Q9C075 422 aa23.69■■□□□ 1.38
TRIM3-202ENST00000359518 ACTN4O43707 911 aaKnown RBP23.68■■□□□ 1.38
TRIM3-202ENST00000359518 PDE8AO60658 829 aa23.68■■□□□ 1.38
TRIM3-202ENST00000359518 BRINP3Q76B58 766 aa23.68■■□□□ 1.38
TRIM3-202ENST00000359518 NUTM2AQ8IVF1 878 aaPredicted RBP23.68■■□□□ 1.38
TRIM3-202ENST00000359518 FANCBQ8NB91 859 aa23.68■■□□□ 1.38
TRIM3-202ENST00000359518 CDHR2Q9BYE9 1310 aa23.68■■□□□ 1.38
TRIM3-202ENST00000359518 ZNF654Q8IZM8 581 aa23.68■■□□□ 1.38
TRIM3-202ENST00000359518 LRP2BPQ9P2M1 347 aa23.68■■□□□ 1.38
TRIM3-202ENST00000359518 SARSP49591 514 aaKnown RBP23.68■■□□□ 1.38
TRIM3-202ENST00000359518 MAP3K9P80192 1104 aa23.68■■□□□ 1.38
TRIM3-202ENST00000359518 FCHSD1Q86WN1 690 aa23.68■■□□□ 1.38
TRIM3-202ENST00000359518 CNNM2Q9H8M5 875 aa23.68■■□□□ 1.38
TRIM3-202ENST00000359518 CD44P16070 742 aaKnown RBP23.67■■□□□ 1.38
TRIM3-202ENST00000359518 ALX1Q15699 326 aa23.67■■□□□ 1.38
TRIM3-202ENST00000359518 NOM1Q5C9Z4 860 aaKnown RBP23.67■■□□□ 1.38
TRIM3-202ENST00000359518 UBAC1Q9BSL1 405 aa23.67■■□□□ 1.38
TRIM3-202ENST00000359518 FOXP1Q9H334 677 aaPredicted RBP23.67■■□□□ 1.38
TRIM3-202ENST00000359518 STK36Q9NRP7 1315 aa23.67■■□□□ 1.38
TRIM3-202ENST00000359518 TNS2Q63HR2 1409 aa23.67■■□□□ 1.38
TRIM3-202ENST00000359518 DEXIO95424 95 aa23.67■■□□□ 1.38
TRIM3-202ENST00000359518 SLC5A1P13866 664 aa23.67■■□□□ 1.38
TRIM3-202ENST00000359518 SHISA4Q96DD7 197 aa23.67■■□□□ 1.38
TRIM3-202ENST00000359518 ABCF2Q9UG63 623 aa23.67■■□□□ 1.38
TRIM3-202ENST00000359518 PUF60Q9UHX1 559 aaKnown RBP23.67■■□□□ 1.38
TRIM3-202ENST00000359518 ATRNO75882 1429 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 WNT7AO00755 349 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 TFRCP02786 760 aaKnown RBP23.66■■□□□ 1.38
TRIM3-202ENST00000359518 PDE4CQ08493 712 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 PARD6BQ9BYG5 372 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 NACAP1Q9BZK3 213 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 DACH1Q9UI36 760 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 SRPRBQ9Y5M8 271 aaKnown RBP23.66■■□□□ 1.38
TRIM3-202ENST00000359518 MRFAP1Q9Y605 127 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 UBR2Q8IWV8 1755 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 RBL2Q08999 1139 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 KIFC2Q96AC6 838 aa23.66■■□□□ 1.38
TRIM3-202ENST00000359518 GYS2P54840 703 aa23.65■■□□□ 1.38
TRIM3-202ENST00000359518 NR1I3Q14994 352 aa23.65■■□□□ 1.38
TRIM3-202ENST00000359518 DZIP3Q86Y13 1208 aaKnown RBP23.65■■□□□ 1.38
TRIM3-202ENST00000359518 CYP2D7A0A087X1C5 515 aa23.65■■□□□ 1.38
TRIM3-202ENST00000359518 TBC1D8O95759 1140 aa23.65■■□□□ 1.38
TRIM3-202ENST00000359518 FGFR2P21802 821 aa23.65■■□□□ 1.38
TRIM3-202ENST00000359518 CC2D1AQ6P1N0 951 aaPredicted RBP23.65■■□□□ 1.38
TRIM3-202ENST00000359518 RAD9BQ6WBX8 426 aa23.65■■□□□ 1.38
TRIM3-202ENST00000359518 IGSF22Q8N9C0 903 aa23.65■■□□□ 1.38
TRIM3-202ENST00000359518 COL5A2P05997 1499 aaPredicted RBP23.65■■□□□ 1.38
TRIM3-202ENST00000359518 DDX60Q8IY21 1712 aaKnown RBP23.65■■□□□ 1.38
TRIM3-202ENST00000359518 AKR1B15C9JRZ8 316 aaPredicted RBP23.65■■□□□ 1.38
TRIM3-202ENST00000359518 PLCD1P51178 756 aa23.65■■□□□ 1.38
TRIM3-202ENST00000359518 AKAP17AQ02040 695 aaKnown RBP23.65■■□□□ 1.38
TRIM3-202ENST00000359518 NEK11Q8NG66 645 aa23.65■■□□□ 1.38
TRIM3-202ENST00000359518 ZNF174Q15697 407 aa23.64■■□□□ 1.38
TRIM3-202ENST00000359518 MYO1BO43795 1136 aa23.64■■□□□ 1.37
TRIM3-202ENST00000359518 NT5DC1Q5TFE4 455 aa23.64■■□□□ 1.37
TRIM3-202ENST00000359518 PPFIBP1Q86W92 1011 aa23.64■■□□□ 1.37
TRIM3-202ENST00000359518 CCDC66A2RUB6 948 aa23.63■■□□□ 1.37
TRIM3-202ENST00000359518 CYP19A1P11511 503 aaPredicted RBP23.63■■□□□ 1.37
TRIM3-202ENST00000359518 CCT6AP40227 531 aaKnown RBP23.63■■□□□ 1.37
TRIM3-202ENST00000359518 ST5P78524 1137 aa23.63■■□□□ 1.37
TRIM3-202ENST00000359518 V9GY48 417 aaPredicted RBP23.63■■□□□ 1.37
TRIM3-202ENST00000359518 ECM29Q5VYK3 1845 aa23.63■■□□□ 1.37
TRIM3-202ENST00000359518 WTIPA6NIX2 430 aaPredicted RBP23.63■■□□□ 1.37
TRIM3-202ENST00000359518 TRIM75PA6NK02 468 aa23.63■■□□□ 1.37
TRIM3-202ENST00000359518 ADGRA1Q86SQ6 560 aa23.63■■□□□ 1.37
TRIM3-202ENST00000359518 SYMPKQ92797 1274 aaKnown RBP23.63■■□□□ 1.37
TRIM3-202ENST00000359518 TNKSO95271 1327 aa23.63■■□□□ 1.37
TRIM3-202ENST00000359518 CCDC175P0C221 793 aa23.62■■□□□ 1.37
TRIM3-202ENST00000359518 STAG1Q8WVM7 1258 aa23.62■■□□□ 1.37
TRIM3-202ENST00000359518 BLZF1Q9H2G9 400 aa23.62■■□□□ 1.37
TRIM3-202ENST00000359518 GOLGA6L9A6NEM1 432 aa23.62■■□□□ 1.37
TRIM3-202ENST00000359518 CYP7A1P22680 504 aa23.62■■□□□ 1.37
TRIM3-202ENST00000359518 OAS2P29728 719 aaKnown RBP23.62■■□□□ 1.37
TRIM3-202ENST00000359518 PPARAQ07869 468 aa23.62■■□□□ 1.37
TRIM3-202ENST00000359518 RGS22Q8NE09 1264 aa23.62■■□□□ 1.37
TRIM3-202ENST00000359518 A0A1B0GTH6 734 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 CCDC196A0A1B0GTZ2 297 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 PLEKHA8P1O95397 391 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 ABL1P00519 1130 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 GPR161Q8N6U8 529 aaKnown RBP23.61■■□□□ 1.37
TRIM3-202ENST00000359518 ARFGAP3Q9NP61 516 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms