RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 NLRP12P59046 1061 aa20.43■□□□□ 0.86
SHANK1-202ENST00000359082 NELFBQ8WX92 580 aa20.43■□□□□ 0.86
SHANK1-202ENST00000359082 BLZF1Q9H2G9 400 aa20.43■□□□□ 0.86
SHANK1-202ENST00000359082 AFG3L2Q9Y4W6 797 aa20.43■□□□□ 0.86
SHANK1-202ENST00000359082 NDUFAB1O14561 156 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 MCUR1Q96AQ8 359 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 GIPC1O14908 333 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 CASQ2O14958 399 aaPredicted RBP20.42■□□□□ 0.86
SHANK1-202ENST00000359082 TAF5LO75529 589 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 DCUN1D2Q6PH85 259 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 MRPL44Q9H9J2 332 aaKnown RBP20.42■□□□□ 0.86
SHANK1-202ENST00000359082 ZBTB40Q9NUA8 1239 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 CCDC62Q6P9F0 684 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 ATP10BO94823 1461 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 TAOK1Q7L7X3 1001 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 NUP58Q9BVL2 599 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 CUTAO60888 179 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 CUL4BQ13620 913 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 CALCRLQ16602 461 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 SLC9C1Q4G0N8 1177 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 VCX3BQ9H321 246 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 GGA1Q9UJY5 639 aa20.42■□□□□ 0.86
SHANK1-202ENST00000359082 PHKBQ93100 1093 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 HOXC9P31274 260 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 FAM227BQ96M60 508 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 EYA1Q99502 592 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 CBX8Q9HC52 389 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 NUP160Q12769 1436 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 CLGNO14967 610 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
SHANK1-202ENST00000359082 G2E3Q7L622 706 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 PPP1R12CQ9BZL4 782 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 NBPF14Q5TI25 921 aa20.41■□□□□ 0.86
SHANK1-202ENST00000359082 C17orf53Q8N3J3 647 aaPredicted RBP20.41■□□□□ 0.86
SHANK1-202ENST00000359082 SYCP2Q9BX26 1530 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 GPAA1O43292 621 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 PRPF6O94906 941 aaKnown RBP20.4■□□□□ 0.86
SHANK1-202ENST00000359082 MAN1A1P33908 653 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 DTNBO60941 627 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 LRMPQ12912 555 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 ELF2Q15723 593 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 PHACTR3Q96KR7 559 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 DNM3Q9UQ16 869 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 I3L4J1 428 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 RIOK3O14730 519 aaKnown RBP20.4■□□□□ 0.86
SHANK1-202ENST00000359082 TBC1D8O95759 1140 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 ZNF75DP51815 510 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 TCP10Q12799 353 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 LMNTD2Q8IXW0 634 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 LRWD1Q9UFC0 647 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 SMAP1Q8IYB5 467 aaPredicted RBP20.4■□□□□ 0.86
SHANK1-202ENST00000359082 DIS3L2Q8IYB7 885 aaKnown RBP20.4■□□□□ 0.86
SHANK1-202ENST00000359082 CCDC105Q8IYK2 499 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 MGARPQ8TDB4 240 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 CCDC170Q8IYT3 715 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 OTUD7AQ8TE49 926 aaPredicted RBP20.4■□□□□ 0.86
SHANK1-202ENST00000359082 NUF2Q9BZD4 464 aa20.4■□□□□ 0.86
SHANK1-202ENST00000359082 EYA2O00167 538 aa20.39■□□□□ 0.86
SHANK1-202ENST00000359082 HERC4Q5GLZ8 1057 aaPredicted RBP20.39■□□□□ 0.86
SHANK1-202ENST00000359082 CABP7Q86V35 215 aa20.39■□□□□ 0.86
SHANK1-202ENST00000359082 DBNDD2Q9BQY9 259 aa20.39■□□□□ 0.86
SHANK1-202ENST00000359082 FEZ2Q9UHY8 353 aaPredicted RBP20.39■□□□□ 0.86
SHANK1-202ENST00000359082 ANGEL1Q9UNK9 670 aaKnown RBP20.39■□□□□ 0.86
SHANK1-202ENST00000359082 CTTNBP2Q8WZ74 1663 aa20.39■□□□□ 0.86
SHANK1-202ENST00000359082 FAM173BQ6P4H8 233 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 KCNJ14Q9UNX9 436 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 EXOC3O60645 756 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 ARHGAP44Q17R89 818 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 PLBD2Q8NHP8 589 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 NSMCE1Q8WV22 266 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 AZI2Q9H6S1 392 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 DDX21Q9NR30 783 aaKnown RBP eCLIP20.39■□□□□ 0.85
SHANK1-202ENST00000359082 NDUFB9Q9Y6M9 179 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 EIF2AK4Q9P2K8 1649 aaKnown RBP20.39■□□□□ 0.85
SHANK1-202ENST00000359082 hCG_1642624A0A1W2PR95 340 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 CCDC125Q86Z20 511 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 CPXCR1Q8N123 301 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 GABPB2Q8TAK5 448 aaPredicted RBP20.39■□□□□ 0.85
SHANK1-202ENST00000359082 UGGT2Q9NYU1 1516 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 STK24Q9Y6E0 443 aa20.39■□□□□ 0.85
SHANK1-202ENST00000359082 ZBED4O75132 1171 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 ZNF202O95125 648 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 POSTNQ15063 836 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 SFMBT2Q5VUG0 894 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 CCDC89Q8N998 374 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 MTX1Q13505 466 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 NONOQ15233 471 aaKnown RBP eCLIP20.38■□□□□ 0.85
SHANK1-202ENST00000359082 VPS37BQ9H9H4 285 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 GOLGA6BA6NDN3 693 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 INPP5BP32019 993 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 TUBB2AQ13885 445 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 VSIG1Q86XK7 387 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 TUBB2BQ9BVA1 445 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 TXNDC9O14530 226 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 KIF3CO14782 793 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 KLHL30Q0D2K2 578 aa20.38■□□□□ 0.85
SHANK1-202ENST00000359082 BRDTQ58F21 947 aaPredicted RBP20.38■□□□□ 0.85
SHANK1-202ENST00000359082 PDE8AO60658 829 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 CD19P15391 556 aa20.37■□□□□ 0.85
SHANK1-202ENST00000359082 LLPHQ9BRT6 129 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms