RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 CORO1CQ9ULV4 474 aaPredicted RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 L3MBTL1Q9Y468 752 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 PCDHGC5Q9Y5F6 944 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 NPHP4O75161 1426 aaPredicted RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 EIF4E1BA6NMX2 242 aaKnown RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 SMIM24O75264 130 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 KRT14P02533 472 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 PYGBP11216 843 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 SCTRP47872 440 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 CKAP4Q07065 602 aaKnown RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 ANKRD20A8PQ5CZ79 823 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 CWF19L1Q69YN2 538 aaKnown RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 PLPPR3Q6T4P5 718 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 SPATA21Q7Z572 469 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 NOC3LQ8WTT2 800 aaKnown RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 SLF1Q9BQI6 1058 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 GOPCQ9HD26 462 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 GNAT1P11488 350 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 IL13P35225 146 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 FLIIQ13045 1269 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 C6orf89Q6UWU4 347 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 TRAPPC11Q7Z392 1133 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 PNMA8AQ86V59 439 aaPredicted RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 MFN1Q8IWA4 741 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 AENQ8WTP8 325 aaKnown RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 CYFIP2Q96F07 1278 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 USP44Q9H0E7 712 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 ZCWPW1Q9H0M4 648 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 NCOA5Q9HCD5 579 aaKnown RBP12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 RGL1Q9NZL6 768 aa12.8□□□□□ -0.36
SEPSECS-201ENST00000358971 TEX33O43247 280 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 MGRN1O60291 552 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 CDKL5O76039 1030 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 CMA1P23946 247 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 PSMD1Q99460 953 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 EPAS1Q99814 870 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 TAOK2Q9UL54 1235 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 CHD2O14647 1828 aaKnown RBP12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 CLTAP09496 248 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 MRPS25P82663 173 aaKnown RBP12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 KRT32Q14532 448 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 FAM167BQ9BTA0 163 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 FSD1Q9BTV5 496 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 EBF2Q9HAK2 575 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 SAMSN1Q9NSI8 373 aaKnown RBP12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 GGA2Q9UJY4 613 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 EFCAB6Q5THR3 1501 aa12.79□□□□□ -0.36
SEPSECS-201ENST00000358971 PREX1Q8TCU6 1659 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 UPP2O95045 317 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 EPB41P11171 864 aaKnown RBP12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 NR1D1P20393 614 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 CDC27P30260 824 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 CASP14P31944 242 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 C2orf54Q08AI8 447 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 ANKRD23Q86SG2 305 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 ACSBG1Q96GR2 724 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 RPGRIP1Q96KN7 1286 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 BIN2Q9UBW5 565 aaPredicted RBP12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 PCDHA5Q9Y5H7 936 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 ZFYVE9O95405 1425 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 SPDYE3A6NKU9 549 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 HIP1O00291 1037 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 YEATS4O95619 227 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 ATP1A1P05023 1023 aaKnown RBP12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 ELF3P78545 371 aaPredicted RBP12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 NUTM2DQ5VT03 806 aaPredicted RBP12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 ALS2CLQ60I27 953 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 KDM7AQ6ZMT4 941 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 TSEN2Q8NCE0 465 aaKnown RBP12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 TRIM10Q9UDY6 481 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 DIAPH2O60879 1101 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 CTDNEP1O95476 244 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 ABCD1P33897 745 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 MDH1P40925 334 aaKnown RBP12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 XRCC4Q13426 336 aa12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 NUTM2AQ8IVF1 878 aaPredicted RBP12.78□□□□□ -0.36
SEPSECS-201ENST00000358971 NEURL4Q96JN8 1562 aa12.77□□□□□ -0.36
SEPSECS-201ENST00000358971 FAM163BP0C2L3 166 aa12.77□□□□□ -0.36
SEPSECS-201ENST00000358971 FERP16591 822 aa12.77□□□□□ -0.36
SEPSECS-201ENST00000358971 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.36
SEPSECS-201ENST00000358971 NR1I3Q14994 352 aa12.77□□□□□ -0.36
SEPSECS-201ENST00000358971 ALS2CR12Q96Q35 445 aa12.77□□□□□ -0.36
SEPSECS-201ENST00000358971 TSPYL4Q9UJ04 414 aa12.77□□□□□ -0.36
SEPSECS-201ENST00000358971 MATR3P43243 847 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 ROR2Q01974 943 aaKnown RBP12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 SLMAPQ14BN4 828 aa12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 JAKMIP2Q96AA8 810 aa12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 ZIM3Q96PE6 472 aa12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 MAP3K5Q99683 1374 aa12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 MFAP3LO75121 409 aa12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 LINGO3P0C6S8 592 aa12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 HSP90AB4PQ58FF6 505 aa12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 ARHGAP22Q7Z5H3 698 aa12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 POLR3EQ9NVU0 708 aa12.77□□□□□ -0.37
SEPSECS-201ENST00000358971 NOP53Q9NZM5 478 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms