RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TRIM14Q14142 442 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
COL11A1-202ENST00000358392 TUBBP07437 444 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 FOXD4Q12950 439 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 KMT5BQ4FZB7 885 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 PPP4R1Q8TF05 950 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 RSAD2Q8WXG1 361 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 DDX41Q9UJV9 622 aaKnown RBP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 HECW1Q76N89 1606 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 hCG_1642624A0A1W2PR95 340 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 RGS16O15492 202 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 CCDC125Q86Z20 511 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 MRPL44Q9H9J2 332 aaKnown RBP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 FAF1Q9UNN5 650 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 CTNNA1P35221 906 aaKnown RBP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 MYL10Q9BUA6 226 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 ARMT1Q9H993 441 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 B4DLN1 442 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 CLTAP09496 248 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 ABCB4P21439 1286 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 MRPL12P52815 198 aaKnown RBP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 RPS6KA1Q15418 735 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 ANKRD44Q8N8A2 993 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 NSMCE1Q8WV22 266 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 NOD1Q9Y239 953 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 ARHGEF35A5YM69 484 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 BUB1O43683 1085 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 PLCD1P51178 756 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 ITKQ08881 620 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 CFAP221Q4G0U5 840 aa12.39□□□□□ -0.43
COL11A1-202ENST00000358392 EPRSP07814 1512 aaKnown RBP12.39□□□□□ -0.43
COL11A1-202ENST00000358392 GADD45BO75293 160 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-202ENST00000358392 CD19P15391 556 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 LIG3P49916 1009 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 ANO1Q5XXA6 986 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 GJA3Q9Y6H8 435 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 ARAP1Q96P48 1450 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 TTC21BQ7Z4L5 1316 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 RASSF2P50749 326 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 KLHL30Q0D2K2 578 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 DBN1Q16643 649 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 TMTC4Q5T4D3 741 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 LGSNQ5TDP6 509 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 POMGNT1Q8WZA1 660 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 NLRC4Q9NPP4 1024 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 FAM207AQ9NSI2 230 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-202ENST00000358392 PPFIA2O75334 1257 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 TROVE2P10155 538 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL11A1-202ENST00000358392 IFRD2Q12894 506 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-202ENST00000358392 ZSCAN26Q16670 478 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 RRAGAQ7L523 313 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 ABL1P00519 1130 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 TSTA3Q13630 321 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-202ENST00000358392 HS1BP3Q53T59 392 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 SCYL2Q6P3W7 929 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 DZIP3Q86Y13 1208 aaKnown RBP12.38□□□□□ -0.43
COL11A1-202ENST00000358392 PHKBQ93100 1093 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 VCX3AQ9NNX9 186 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 NOP56O00567 594 aaKnown RBP12.38□□□□□ -0.43
COL11A1-202ENST00000358392 RPS6KB1P23443 525 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 JADE1Q6IE81 842 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 NCAPD3P42695 1498 aa12.38□□□□□ -0.43
COL11A1-202ENST00000358392 PRPF6O94906 941 aaKnown RBP12.37□□□□□ -0.43
COL11A1-202ENST00000358392 GSTA1P08263 222 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 GSTA2P09210 222 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 MAGEA1P43355 309 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 PNOCQ13519 176 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 STAG1Q8WVM7 1258 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 TRIM4Q9C037 500 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-202ENST00000358392 KRT81Q14533 505 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 ATP2A3Q93084 1043 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 LSM14BQ9BX40 385 aaKnown RBP12.37□□□□□ -0.43
COL11A1-202ENST00000358392 CTDSPL2Q05D32 466 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 KAZNQ674X7 775 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 MYRIPQ8NFW9 859 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 GABPB2Q8TAK5 448 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-202ENST00000358392 ZC3H12CQ9C0D7 883 aaKnown RBP12.37□□□□□ -0.43
COL11A1-202ENST00000358392 DPH5Q9H2P9 285 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 ZNF408Q9H9D4 720 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 ANLNQ9NQW6 1124 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 IRS4O14654 1257 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-202ENST00000358392 KRT3P12035 628 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 NLRP12P59046 1061 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-202ENST00000358392 IFNB1P01574 187 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 PHEXP78562 749 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 ADGRF5Q8IZF2 1346 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 PFDN1O60925 122 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 RNF40O75150 1001 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 SPOUT1Q5T280 376 aaKnown RBP12.37□□□□□ -0.43
COL11A1-202ENST00000358392 CFAP61Q8NHU2 1237 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 CHMP6Q96FZ7 201 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 DISP3Q9P2K9 1392 aa12.37□□□□□ -0.43
COL11A1-202ENST00000358392 NPHP3Q7Z494 1330 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 ZNF202O95125 648 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms