RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 APBA2Q99767 749 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 GINM1Q9NU53 330 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 PA2G4Q9UQ80 394 aaKnown RBP19.59■□□□□ 0.73
IFT20-202ENST00000357896 DNAH12Q6ZR08 3092 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 A0A1B0GUL7 405 aa19.58■□□□□ 0.72
IFT20-202ENST00000357896 USP17L10C9JJH3 530 aa19.58■□□□□ 0.72
IFT20-202ENST00000357896 TEX11Q8IYF3 940 aa19.58■□□□□ 0.72
IFT20-202ENST00000357896 NOL10Q9BSC4 688 aaKnown RBP19.58■□□□□ 0.72
IFT20-202ENST00000357896 SENP6Q9GZR1 1112 aaPredicted RBP19.58■□□□□ 0.72
IFT20-202ENST00000357896 CWC22Q9HCG8 908 aaKnown RBP19.58■□□□□ 0.72
IFT20-202ENST00000357896 MSCO60682 206 aa19.57■□□□□ 0.72
IFT20-202ENST00000357896 GLRX3O76003 335 aaKnown RBP19.57■□□□□ 0.72
IFT20-202ENST00000357896 CCL14Q16627 93 aa19.57■□□□□ 0.72
IFT20-202ENST00000357896 Q3C1V9 767 aa19.57■□□□□ 0.72
IFT20-202ENST00000357896 MFSD14CQ5VZR4 134 aa19.57■□□□□ 0.72
IFT20-202ENST00000357896 SPATA5Q8NB90 893 aa19.57■□□□□ 0.72
IFT20-202ENST00000357896 RAI14Q9P0K7 980 aa19.57■□□□□ 0.72
IFT20-202ENST00000357896 ANP32CO43423 234 aa19.56■□□□□ 0.72
IFT20-202ENST00000357896 PEX10O60683 326 aa19.56■□□□□ 0.72
IFT20-202ENST00000357896 ALDH1L2Q3SY69 923 aa19.56■□□□□ 0.72
IFT20-202ENST00000357896 FOXP4Q8IVH2 680 aaPredicted RBP19.56■□□□□ 0.72
IFT20-202ENST00000357896 EDC3Q96F86 508 aaKnown RBP19.56■□□□□ 0.72
IFT20-202ENST00000357896 TRIM34Q9BYJ4 488 aa19.56■□□□□ 0.72
IFT20-202ENST00000357896 PORCNQ9H237 461 aa19.56■□□□□ 0.72
IFT20-202ENST00000357896 HMG20BQ9P0W2 317 aa19.56■□□□□ 0.72
IFT20-202ENST00000357896 ATAD5Q96QE3 1844 aa19.55■□□□□ 0.72
IFT20-202ENST00000357896 ZNF521Q96K83 1311 aa19.55■□□□□ 0.72
IFT20-202ENST00000357896 BAG3O95817 575 aa19.55■□□□□ 0.72
IFT20-202ENST00000357896 CCNA1P78396 465 aa19.55■□□□□ 0.72
IFT20-202ENST00000357896 MAP2K5Q13163 448 aa19.55■□□□□ 0.72
IFT20-202ENST00000357896 GORABQ5T7V8 394 aa19.55■□□□□ 0.72
IFT20-202ENST00000357896 NEUROD6Q96NK8 337 aa19.55■□□□□ 0.72
IFT20-202ENST00000357896 CDX2Q99626 313 aaPredicted RBP19.55■□□□□ 0.72
IFT20-202ENST00000357896 PAGR1Q9BTK6 254 aa19.55■□□□□ 0.72
IFT20-202ENST00000357896 E9PSI1 815 aa19.54■□□□□ 0.72
IFT20-202ENST00000357896 PLCG2P16885 1265 aa19.54■□□□□ 0.72
IFT20-202ENST00000357896 TFCP2Q12800 502 aa19.54■□□□□ 0.72
IFT20-202ENST00000357896 TBC1D9Q6ZT07 1266 aa19.54■□□□□ 0.72
IFT20-202ENST00000357896 FAM9BQ8IZU0 186 aa19.54■□□□□ 0.72
IFT20-202ENST00000357896 CRACR2BQ8N4Y2 399 aaPredicted RBP19.54■□□□□ 0.72
IFT20-202ENST00000357896 LPAR1Q92633 364 aa19.54■□□□□ 0.72
IFT20-202ENST00000357896 LRP2BPQ9P2M1 347 aa19.54■□□□□ 0.72
IFT20-202ENST00000357896 DDX20Q9UHI6 824 aaKnown RBP19.54■□□□□ 0.72
IFT20-202ENST00000357896 EYSQ5T1H1 3165 aa19.54■□□□□ 0.72
IFT20-202ENST00000357896 DNM1LO00429 736 aa19.53■□□□□ 0.72
IFT20-202ENST00000357896 METTL16Q86W50 562 aaKnown RBP19.53■□□□□ 0.72
IFT20-202ENST00000357896 MAFAQ8NHW3 353 aaPredicted RBP19.53■□□□□ 0.72
IFT20-202ENST00000357896 SH3RF3Q8TEJ3 882 aaPredicted RBP19.53■□□□□ 0.72
IFT20-202ENST00000357896 SEMA6BQ9H3T3 888 aa19.53■□□□□ 0.72
IFT20-202ENST00000357896 PRDM6Q9NQX0 595 aa19.53■□□□□ 0.72
IFT20-202ENST00000357896 RABGAP1Q9Y3P9 1069 aa19.53■□□□□ 0.72
IFT20-202ENST00000357896 SPTBN5Q9NRC6 3674 aaKnown RBP19.53■□□□□ 0.72
IFT20-202ENST00000357896 CNGA1P29973 690 aa19.52■□□□□ 0.72
IFT20-202ENST00000357896 ATN1P54259 1190 aaPredicted RBP19.52■□□□□ 0.72
IFT20-202ENST00000357896 USP17L2Q6R6M4 530 aa19.52■□□□□ 0.72
IFT20-202ENST00000357896 EMILIN3Q9NT22 766 aa19.52■□□□□ 0.72
IFT20-202ENST00000357896 SMC4Q9NTJ3 1288 aa19.52■□□□□ 0.72
IFT20-202ENST00000357896 ZBTB21Q9ULJ3 1066 aa19.52■□□□□ 0.72
IFT20-202ENST00000357896 SLC15A5A6NIM6 579 aa19.51■□□□□ 0.71
IFT20-202ENST00000357896 JAG1P78504 1218 aa19.51■□□□□ 0.71
IFT20-202ENST00000357896 ATP2B2Q01814 1243 aa19.51■□□□□ 0.71
IFT20-202ENST00000357896 PI16Q6UXB8 463 aa19.51■□□□□ 0.71
IFT20-202ENST00000357896 ATF7IPQ6VMQ6 1270 aa19.51■□□□□ 0.71
IFT20-202ENST00000357896 SYMPKQ92797 1274 aaKnown RBP19.51■□□□□ 0.71
IFT20-202ENST00000357896 USP17L15C9J2P7 530 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 USP17L13C9JLJ4 530 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 USP17L11C9JVI0 530 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 USP17L18D6R9N7 530 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 USP17L22D6RA61 530 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 USP17L17D6RBQ6 530 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 USP17L19D6RCP7 530 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 USP17L20D6RJB6 530 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 SRGAP3O43295 1099 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 GDF11O95390 407 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 HOXC6P09630 235 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 ARID4AP29374 1257 aaPredicted RBP19.5■□□□□ 0.71
IFT20-202ENST00000357896 RTP1P59025 263 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 PPP4CP60510 307 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 USP17L24Q0WX57 530 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 WDR78Q5VTH9 848 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 ARRDC4Q8NCT1 418 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 TGFBRAP1Q8WUH2 860 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 AATFQ9NY61 560 aaKnown RBP eCLIP19.5■□□□□ 0.71
IFT20-202ENST00000357896 IVNS1ABPQ9Y6Y0 642 aa19.5■□□□□ 0.71
IFT20-202ENST00000357896 UQCRFS1P1P0C7P4 283 aa19.49■□□□□ 0.71
IFT20-202ENST00000357896 PTPREP23469 700 aa19.49■□□□□ 0.71
IFT20-202ENST00000357896 SMAD3P84022 425 aaKnown RBP19.49■□□□□ 0.71
IFT20-202ENST00000357896 SHHQ15465 462 aa19.49■□□□□ 0.71
IFT20-202ENST00000357896 NAA16Q6N069 864 aaPredicted RBP19.49■□□□□ 0.71
IFT20-202ENST00000357896 POTEEQ6S8J3 1075 aa19.49■□□□□ 0.71
IFT20-202ENST00000357896 API5Q9BZZ5 524 aaKnown RBP19.49■□□□□ 0.71
IFT20-202ENST00000357896 DNAJC18Q9H819 358 aa19.49■□□□□ 0.71
IFT20-202ENST00000357896 FLRT1Q9NZU1 646 aa19.49■□□□□ 0.71
IFT20-202ENST00000357896 HLA-DOAP06340 250 aa19.48■□□□□ 0.71
IFT20-202ENST00000357896 MAPKAPK5Q8IW41 473 aa19.48■□□□□ 0.71
IFT20-202ENST00000357896 C12orf42Q96LP6 360 aa19.48■□□□□ 0.71
IFT20-202ENST00000357896 PALD1Q9ULE6 856 aa19.48■□□□□ 0.71
IFT20-202ENST00000357896 ATP11BQ9Y2G3 1177 aa19.48■□□□□ 0.71
IFT20-202ENST00000357896 PRUNE2Q8WUY3 3088 aa19.48■□□□□ 0.71
IFT20-202ENST00000357896 FLT1P17948 1338 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms