RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 MAGEB6Q8N7X4 407 aa12.48□□□□□ -0.41
LINC01560-201ENST00000357412 DPF3Q92784 378 aa12.48□□□□□ -0.41
LINC01560-201ENST00000357412 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
LINC01560-201ENST00000357412 PAK6Q9NQU5 681 aaPredicted RBP12.48□□□□□ -0.41
LINC01560-201ENST00000357412 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
LINC01560-201ENST00000357412 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
LINC01560-201ENST00000357412 ZBTB21Q9ULJ3 1066 aa12.48□□□□□ -0.41
LINC01560-201ENST00000357412 C19orf81C9J6K1 198 aa12.47□□□□□ -0.41
LINC01560-201ENST00000357412 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
LINC01560-201ENST00000357412 FARP2O94887 1054 aaPredicted RBP12.47□□□□□ -0.41
LINC01560-201ENST00000357412 TATDN1Q6P1N9 297 aa12.47□□□□□ -0.41
LINC01560-201ENST00000357412 ERC1Q8IUD2 1116 aa12.47□□□□□ -0.41
LINC01560-201ENST00000357412 DEFB118Q96PH6 123 aa12.47□□□□□ -0.41
LINC01560-201ENST00000357412 TRIM34Q9BYJ4 488 aa12.47□□□□□ -0.41
LINC01560-201ENST00000357412 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
LINC01560-201ENST00000357412 TXNRD2Q9NNW7 524 aa12.47□□□□□ -0.41
LINC01560-201ENST00000357412 TMOD4Q9NZQ9 345 aa12.47□□□□□ -0.41
LINC01560-201ENST00000357412 PEX10O60683 326 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 GH2P01242 217 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 HERVK_113P62684 666 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 IRX3P78415 501 aaPredicted RBP12.46□□□□□ -0.41
LINC01560-201ENST00000357412 MAP3K12Q12852 859 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.41
LINC01560-201ENST00000357412 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 CERS3Q8IU89 383 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 RHPN1Q8TCX5 695 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 RIOK1Q9BRS2 568 aaKnown RBP12.46□□□□□ -0.41
LINC01560-201ENST00000357412 HTATIP2Q9BUP3 242 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 IL1RAPL2Q9NP60 686 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 EMILIN3Q9NT22 766 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
LINC01560-201ENST00000357412 TFRCP02786 760 aaKnown RBP12.45□□□□□ -0.42
LINC01560-201ENST00000357412 CAPN2P17655 700 aa12.45□□□□□ -0.42
LINC01560-201ENST00000357412 USP5P45974 858 aa12.45□□□□□ -0.42
LINC01560-201ENST00000357412 TRIM32Q13049 653 aa12.45□□□□□ -0.42
LINC01560-201ENST00000357412 Q3C1V9 767 aa12.45□□□□□ -0.42
LINC01560-201ENST00000357412 HSP90AB4PQ58FF6 505 aa12.45□□□□□ -0.42
LINC01560-201ENST00000357412 SIRT2Q8IXJ6 389 aa12.45□□□□□ -0.42
LINC01560-201ENST00000357412 GPRC5AQ8NFJ5 357 aa12.45□□□□□ -0.42
LINC01560-201ENST00000357412 EHD4Q9H223 541 aa12.45□□□□□ -0.42
LINC01560-201ENST00000357412 SERPINB13Q9UIV8 391 aa12.45□□□□□ -0.42
LINC01560-201ENST00000357412 RANBP2P49792 3224 aaKnown RBP12.45□□□□□ -0.42
LINC01560-201ENST00000357412 HMGCRP04035 888 aa12.44□□□□□ -0.42
LINC01560-201ENST00000357412 PLCD1P51178 756 aa12.44□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L2Q6R6M4 530 aa12.44□□□□□ -0.42
LINC01560-201ENST00000357412 TTC6Q86TZ1 520 aa12.44□□□□□ -0.42
LINC01560-201ENST00000357412 RPAP2Q8IXW5 612 aaPredicted RBP12.44□□□□□ -0.42
LINC01560-201ENST00000357412 TRIB2Q92519 343 aa12.44□□□□□ -0.42
LINC01560-201ENST00000357412 C12orf42Q96LP6 360 aa12.44□□□□□ -0.42
LINC01560-201ENST00000357412 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC01560-201ENST00000357412 PRO3102Q9H379 93 aa12.44□□□□□ -0.42
LINC01560-201ENST00000357412 ATXN8OSP0DMR3 200 aa12.43□□□□□ -0.42
LINC01560-201ENST00000357412 PDE6AP16499 860 aa12.43□□□□□ -0.42
LINC01560-201ENST00000357412 CYP2B6P20813 491 aa12.43□□□□□ -0.42
LINC01560-201ENST00000357412 MAP3K21Q5TCX8 1036 aa12.43□□□□□ -0.42
LINC01560-201ENST00000357412 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC01560-201ENST00000357412 KIF1BPQ96EK5 621 aa12.43□□□□□ -0.42
LINC01560-201ENST00000357412 ZBTB40Q9NUA8 1239 aa12.43□□□□□ -0.42
LINC01560-201ENST00000357412 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
LINC01560-201ENST00000357412 NR2E3Q9Y5X4 410 aa12.43□□□□□ -0.42
LINC01560-201ENST00000357412 RPTORQ8N122 1335 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 ZSWIM8A7E2V4 1837 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 MAGEB6P1A0A0J9YX57 407 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 MS4A1P11836 297 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
LINC01560-201ENST00000357412 GUCY1A2P33402 732 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 SHMT1P34896 483 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
LINC01560-201ENST00000357412 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 ERVK-24P63145 666 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 GABPAQ06546 454 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 TTF1Q15361 905 aaPredicted RBP12.42□□□□□ -0.42
LINC01560-201ENST00000357412 CERKLQ49MI3 558 aaPredicted RBP12.42□□□□□ -0.42
LINC01560-201ENST00000357412 SLC9C2Q5TAH2 1124 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 CLASRPQ8N2M8 674 aaKnown RBP12.42□□□□□ -0.42
LINC01560-201ENST00000357412 ACER1Q8TDN7 264 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 DIS3LQ8TF46 1054 aaKnown RBP12.42□□□□□ -0.42
LINC01560-201ENST00000357412 GTF3C2Q8WUA4 911 aaPredicted RBP12.42□□□□□ -0.42
LINC01560-201ENST00000357412 SOCS4Q8WXH5 440 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 USP6NLQ92738 828 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 PAWRQ96IZ0 340 aaKnown RBP12.42□□□□□ -0.42
LINC01560-201ENST00000357412 NUDT12Q9BQG2 462 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 KIAA1683Q9H0B3 1180 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 PORCNQ9H237 461 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 DDX19BQ9UMR2 479 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 COG6Q9Y2V7 657 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 CEP290O15078 2479 aa12.42□□□□□ -0.42
LINC01560-201ENST00000357412 TCRBV5S4A2TA0A5A2 114 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L15C9J2P7 530 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L13C9JLJ4 530 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L11C9JVI0 530 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L18D6R9N7 530 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L22D6RA61 530 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L17D6RBQ6 530 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L19D6RCP7 530 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L20D6RJB6 530 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 APBB1O00213 710 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 GOLIM4O00461 696 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 CNMDO75829 334 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms