RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 CLIC4Q9Y696 253 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 ATP8B1O43520 1251 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 ACTN4O43707 911 aaKnown RBP17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 PPP1R7Q15435 360 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 LPIN2Q92539 896 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 CYP21A2P08686 494 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 PICALMQ13492 652 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 SETDB1Q15047 1291 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 DPCR1Q3MIW9 517 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 HAUS4Q9H6D7 363 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 hCG_1642624A0A1W2PR95 340 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 LDHBP07195 334 aaKnown RBP17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 TXKP42681 527 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 MRPL12P52815 198 aaKnown RBP17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 NAA25Q14CX7 972 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 IFIH1Q9BYX4 1025 aaKnown RBP17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 KDRP35968 1356 aa17.42■□□□□ 0.38
TRAPPC11-202ENST00000357207 CEP104O60308 925 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 FGAP02671 866 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 ADCY9O60503 1353 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 ATP10AO60312 1499 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 PDE8AO60658 829 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 MAP3K9P80192 1104 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 LACTBP83111 547 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 CLIC6Q96NY7 704 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 COPRSQ9NQ92 184 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 TSKSQ9UJT2 592 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 RFC4P35249 363 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 MXRA7P84157 204 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 TMEM87AQ8NBN3 555 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 DNAI2Q9GZS0 605 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 SPTLC3Q9NUV7 552 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 MYOM2P54296 1465 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 EEF2P13639 858 aaKnown RBP17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 SLC39A14Q15043 492 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 SPATA1Q5VX52 437 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 ZNF654Q8IZM8 581 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 SWAP70Q9UH65 585 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 CDC23Q9UJX2 597 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 ARHGEF5Q12774 1597 aa17.41■□□□□ 0.38
TRAPPC11-202ENST00000357207 PCDH11XQ9BZA7 1347 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 PCDH11YQ9BZA8 1340 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 GJC1P36383 396 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 KLHL7Q8IXQ5 586 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 NSUN7Q8NE18 718 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 MED4Q9NPJ6 270 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 NKIRAS1Q9NYS0 192 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 F8W031 263 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 LARGE1O95461 756 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 ZNF804AQ7Z570 1209 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 LRWD1Q9UFC0 647 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 AATKQ6ZMQ8 1374 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 IKBKBO14920 756 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 ASIC2Q16515 512 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 GOLGA5Q8TBA6 731 aa17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 FAM207AQ9NSI2 230 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRAPPC11-202ENST00000357207 A0A087WWV3 80 aa17.39■□□□□ 0.38
TRAPPC11-202ENST00000357207 SEL1L2Q5TEA6 688 aa17.39■□□□□ 0.38
TRAPPC11-202ENST00000357207 GPIHBP1Q8IV16 184 aa17.39■□□□□ 0.38
TRAPPC11-202ENST00000357207 TRIM58Q8NG06 486 aa17.39■□□□□ 0.38
TRAPPC11-202ENST00000357207 IFT74Q96LB3 600 aa17.39■□□□□ 0.38
TRAPPC11-202ENST00000357207 TRIM31Q9BZY9 425 aa17.39■□□□□ 0.38
TRAPPC11-202ENST00000357207 PPP1R1BQ9UD71 204 aaPredicted RBP17.39■□□□□ 0.38
TRAPPC11-202ENST00000357207 KCNJ18B7U540 433 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 CCNT1O60563 726 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 KCNJ12Q14500 433 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 NONOQ15233 471 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 CLEC17AQ6ZS10 378 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 SRGAP1Q7Z6B7 1085 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 CCDC50Q8IVM0 306 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 C19orf44Q9H6X5 657 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 DBNLQ9UJU6 430 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 EPB41P11171 864 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 NBPF14Q5TI25 921 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 TPTE2Q6XPS3 522 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 PDE11AQ9HCR9 933 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 JAG2Q9Y219 1238 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 UTP11Q9Y3A2 253 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 KLHL30Q0D2K2 578 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 RPS6KA1Q15418 735 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 TYW1BQ6NUM6 668 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 C2CD5Q86YS7 1000 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 CEP63Q96MT8 703 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 NAP1L4Q99733 375 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 POLR3EQ9NVU0 708 aa17.39■□□□□ 0.37
TRAPPC11-202ENST00000357207 DNM2P50570 870 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 RRAGAQ7L523 313 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 SPATA5Q8NB90 893 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 IQCDQ96DY2 449 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 ACSBG1Q96GR2 724 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 SMC6Q96SB8 1091 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 ANKRD2Q9GZV1 360 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 ZMYM6O95789 1325 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 ERCC3P19447 782 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 TNFAIP3P21580 790 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 FAM71BQ8TC56 605 aa17.38■□□□□ 0.37
TRAPPC11-202ENST00000357207 EPN1Q9Y6I3 576 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms